IGR sequence:igr5429#chr5#x1=25893315#l=6924
Mature miRNA sequence:AACUUAUAUUGUGAAACGGA
encoded miRNA:MIR73x
Precursor location:5480 - 5644 (negative strand)
precursor length:165 (45 basepairs)
MIR position:146 - 165 (5480 - 5499)
MIR length:20 (20 paired bases)
miRNA location TIGR v3:chr5:25898794<25898958
miRNA location TIGR v5:chr5:26307852<26308016
Folding energy:-36.96
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UUUGUUUCAC AAUAUAAGUU GUUUUCAAAU UUCUAUUAUA UAUUAUUUUA AUGUUUUAUA    60
(((((((((( (((((((((( (((((,,,,, ,,,,,,,,<< <<--<<____ __>>-->>>> 

                                                                  
AUUAUUUCUA UUAUGCAGUG UCUUUUAUGA UUGGUUAAAC UUUUUAAAAA UAAAUAUUCU   120
,,,,,,,,,, ,<<<<<<<-- -----<<<-- ----<<<<__ ___>>>>--- --->>>---- 

                           ***** ********** *****
UAAUCUGCGU GCUUUUAGCU AAAACAACUU AUAUUGUGAA ACGGA  165
---->>>>>> >,,,,,,,,, )))))))))) )))))))))) )))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs