IGR sequence:igr5429#chr5#x1=25893315#l=6924
Mature miRNA sequence:ACUUAUAUUGUGAAACGGAA
encoded miRNA:MIR33a
Precursor location:5479 - 5645 (negative strand)
precursor length:167 (45 basepairs)
MIR position:148 - 167 (5479 - 5498)
MIR length:20 (19 paired bases)
miRNA location TIGR v3:chr5:25898793<25898959
miRNA location TIGR v5:chr5:26307851<26308017
Folding energy:-37.96
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UUUUGUUUCA CAAUAUAAGU UGUUUUCAAA UUUCUAUUAU AUAUUAUUUU AAUGUUUUAU    60
:((((((((( (((((((((( ((((((,,,, ,,,,,,,,,< <<<--<<___ ___>>-->>> 

                                                                  
AAUUAUUUCU AUUAUGCAGU GUCUUUUAUG AUUGGUUAAA CUUUUUAAAA AUAAAUAUUC   120
>,,,,,,,,, ,,<<<<<<<- ------<<<- -----<<<<_ ____>>>>-- ---->>>--- 

                             *** ********** *******
UUAAUCUGCG UGCUUUUAGC UAAAACAACU UAUAUUGUGA AACGGAA  167
----->>>>> >>,,,,,,,, ,))))))))) )))))))))) )))))):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs