IGR sequence:igr5429#chr5#x1=25893315#l=6924
Mature miRNA sequence:UUCCGUUUCACAAUAUAAGU
encoded miRNA:MIR33
Precursor location:5479 - 5645 (positive strand)
precursor length:167 (40 basepairs)
MIR position:1 - 20 (5479 - 5498)
MIR length:20 (16 paired bases)
miRNA location TIGR v3:chr5:25898793>25898959
miRNA location TIGR v5:chr5:26307851>26308017
Folding energy:-38.82
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
UUCCGUUUCA CAAUAUAAGU UGUUUUAGCU AAAAGCACGC AGAUUAAGAA UAUUUAUUUU    60
::::(((((( (((((((((( ((((((,<<_ ____>>,,<< <<,[[[[[[[ [____]]]]] 

                                                                  
UAAAAAGUUU AACCAAUCAU AAAAGACACU GCAUAAUAGA AAUAAUUAUA AAACAUUAAA   120
]]],,,[[[[ __________ ___]]]],>> >>,,,,,,,, ,,,,,,,,,, ,,,,,,,,,, 

                                                   
AUAAUAUAUA AUAGAAAUUU GAAAACAACU UAUAUUGUGA AACAAAA  167
,,,,,,,,,, ,,,,,,,,,, ,))))))))) )))))))))) )))::::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs