IGR sequence:igr5429#chr5#x1=25893315#l=6924
Mature miRNA sequence:UUCCGUUUCACAAUAUAAGU
encoded miRNA:MIR33
Precursor location:5479 - 5681 (positive strand)
precursor length:203 (56 basepairs)
MIR position:1 - 20 (5479 - 5498)
MIR length:20 (18 paired bases)
miRNA location TIGR v3:chr5:25898793>25898995
miRNA location TIGR v5:chr5:26307851>26308053
Folding energy:-43.12
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
UUCCGUUUCA CAAUAUAAGU UGUUUUAGCU AAAAGCACGC AGAUUAAGAA UAUUUAUUUU    60
:((((((((( -((((((((( ((((((-((( (((,,,,,<< <<,[[[[[[[ [____]]]]] 

                                                                  
UAAAAAGUUU AACCAAUCAU AAAAGACACU GCAUAAUAGA AAUAAUUAUA AAACAUUAAA   120
]]],,,[[[[ __________ ___]]]],>> >>,,,,,,,, ,,,,,,,,,, ,,,,,,,,,, 

                                                                  
AUAAUAUAUA AUAGAAAUUU GAAAACAACU UAUAUUGUGA AACAAAAAAU UUGGUCCAAA   180
,,,,,,[[[[ [[[-----[[ [____]]]-- --]]]]]]], ,,,,,,,,,) )))))--))) 

                         
AUAACUUAUA UUAUGAAACG GAA  203
)))))))))) ))-))))))) )):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs