IGR sequence: | igr5254#chr5#x1=25110924#l=3292 |
---|---|
Mature miRNA sequence: | CUCGGACCAGGCUUCAUUCCC |
encoded miRNA: | MIR22 |
Precursor location: | 2060 - 2146 (positive strand) |
precursor length: | 87 (29 basepairs) |
MIR position: | 67 - 87 (2126 - 2146) |
MIR length: | 21 (16 paired bases) |
miRNA location TIGR v3: | chr5:25112983>25113069 |
miRNA location TIGR v5: | chr5:25522041>25522127 |
Folding energy: | -34.80 |
BLAST hit against RFAM Atha miRNAs: | ath-MIR166g |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
GGAAUGUUGU UUGGCUCGAG GUCAUGGAGA GUAAUUCGUU AACCCAACUC AAAACUCUAA 60 ((((((--(( ((((--(((( (((((--((( ((-----((( _____)))-- ---)))))-- **** ********** ******* AUGAUUCUCG GACCAGGCUU CAUUCCC 87 ))))-))))) --))))))-- )))))):

Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|1999_118135+118264_110-130
- gnl|BL_ORD_ID|1300_66426+66555_110-130