IGR sequence: | igr5124#chr5#x1=24569732#l=3135 |
---|---|
Mature miRNA sequence: | UGCCAAAGGAGAGUUGCCCUG |
encoded miRNA: | MIR16a |
Precursor location: | 932 - 1025 (positive strand) |
precursor length: | 94 (32 basepairs) |
MIR position: | 74 - 94 (1005 - 1025) |
MIR length: | 21 (19 paired bases) |
miRNA location TIGR v3: | chr5:24570663>24570756 |
miRNA location TIGR v5: | chr5:24979721>24979814 |
Folding energy: | -42.99 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
UAGGGCAUCU UUCUAUUGGC AGGCGACUUG GCUAUUUGUA UCUUUUGUGU UCUUGACUAU 60 (((((((-(( ((((-((((( (((-(((-(( ((((---((_ __________ _____))--- ******* ********** **** UGGCUAUGUC ACUUGCCAAA GGAGAGUUGC CCUG 94 ))))))-))) -))))))))- ))))))-))) ))))
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|710_89525-89789_1-21