IGR sequence: | igr4835#chr1#x1=22526634#l=6090 |
---|---|
Mature miRNA sequence: | GUGAUAUUGGCACGGCUCAAUCA |
encoded miRNA: | MIR46a |
Precursor location: | 3256 - 3338 (positive strand) |
precursor length: | 83 (29 basepairs) |
MIR position: | 1 - 23 (3256 - 3278) |
MIR length: | 23 (18 paired bases) |
miRNA location TIGR v3: | chr1:22529889>22529971 |
miRNA location TIGR v5: | chr1:22933761>22933843 |
Folding energy: | -33.80 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
********** ********** *** GUGAUAUUGG CACGGCUCAA UCAAAUAAAC CGAUCUUUAA AACAAAAGAG UACGGUUUUC 60 ::(((((((( --(((-(((( (((---(((( ((-(((((__ ____)))))- --))))))-- UGAUUGAACC GCACCAAUAU CUC 83 )))))))-)) )--))))))) )::
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|3254_118404-118514_89-111
- gnl|BL_ORD_ID|3254_118404+118514_1-23