IGR sequence: | igr4805#chr5#x1=23243506#l=2368 |
---|---|
Mature miRNA sequence: | GGCGCUAUCCCUCCUGAGCUU |
encoded miRNA: | MIR26a |
Precursor location: | 1624 - 1715 (negative strand) |
precursor length: | 92 (24 basepairs) |
MIR position: | 72 - 92 (1624 - 1644) |
MIR length: | 21 (17 paired bases) |
miRNA location TIGR v3: | chr5:23245129<23245220 |
miRNA location TIGR v5: | chr5:23654187<23654278 |
Folding energy: | -37.20 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
GAACUCAGGA UGGAUAGCGC CAACAGAUAU ACAUGUACGC AUAUACAAAA CAUACAGCAC 60 :::((((((( -((((((((( ((,,,,,,,, ,,,<<<<___ ___>>>>,,, ,,,,,,,,,, ********* ********** ** UGGUGAGCCA UGGCGCUAUC CCUCCUGAGC UU 92 ,<<____>>, )))))))))) )-))))))): ::
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|3598_86365+86419_1-21
- gnl|BL_ORD_ID|3598_86365-86420_36-56