IGR sequence:igr4444#chr3#x1=20692045#l=9635
Mature miRNA sequence:GAUCAAUGCGAUCCCUUUGGA
encoded miRNA:MIR20a
Precursor location:7608 - 7747 (negative strand)
precursor length:140 (46 basepairs)
MIR position:120 - 140 (7608 - 7628)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr3:20699652<20699791
miRNA location TIGR v5:chr3:20702636<20702775
Folding energy:-46.40
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UCCAAAGAGA UCGCAUGAUC CGGAAAAGUA AGCAAAAUGU UUGGAAUUUG UUUUUCUUCC    60
(((((((-(( (((((((((( (-------(( (((,,,,,,, ,,,,,,,<<< <<<<<-<<<< 

                                                                * 
AUCUUUCGAU UGAGAAGGAA AAAAAAAACA AUUAUUGGGG AAUAAAUCAG CUUAAUUAGG   120
-<<<<_____ _>>>>->>>> --->>>>>>> ><<<<<____ >>>>>,,,,) ))))----)) 

********** ********** 
AUCAAUGCGA UCCCUUUGGA   140
)))-)))))) ))-)))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs