IGR sequence:igr4147#chr1#x1=19730787#l=4121
Mature miRNA sequence:ACUUAUAUUAUGAAACAGAGGGA
encoded miRNA:MIR25g
Precursor location:390 - 604 (negative strand)
precursor length:215 (58 basepairs)
MIR position:193 - 215 (390 - 412)
MIR length:23 (20 paired bases)
miRNA location TIGR v3:chr1:19718611<19718825 chr1:19731176<19731390
miRNA location TIGR v5:chr1:20122483<20122697 chr1:20135048<20135262
Folding energy:-31.25
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UCCAUCUGUU UUACAAUAUA AAUUGUUUUA AAUAAAAACA CGCAAAUUAA AAAUAUUUAC    60
(((-(((((( (((-(((((( (-(((((((- (((((,,,,, ,<<<<<<<<, ,,,[[[[[[- 

                                                                  
UUUUAAAAAA UUCUACUAAU CACAAAAGAG ACUACAUAAC AUAAAUAAUC AUAAAAUAUU   120
---------- [[[[______ ______]]]] ---------- -]]]]]],,, ,,,,,[[[[[ 

                                                                  
AAAAUAAUAU AUAAUUUGUA UAGAAACUUG AAAACAACUU AUAUAGUAAA ACAAAAAAAU   180
[___]]]]]] ,>>>>>>>>, ,,,,,,,,,, ,,,,,,[[[_ ____]]],,, ,,,,,,,,,) 

             ******** ********** *****
UGUUCCAAAA CAACUUAUAU UAUGAAACAG AGGGA  215
))))--)))) )))-)))))) )-)))))))) )-)))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs