IGR sequence: | igr4127#chr1#x1=19639214#l=3221 |
---|---|
Mature miRNA sequence: | AGCCAAGGAUGACUUGCCGAU |
encoded miRNA: | MIR35 |
Precursor location: | 86 - 157 (negative strand) |
precursor length: | 72 (28 basepairs) |
MIR position: | 1 - 21 (137 - 157) |
MIR length: | 21 (18 paired bases) |
miRNA location TIGR v3: | chr1:19639299<19639370 |
miRNA location TIGR v5: | chr1:20043171<20043242 |
Folding energy: | -34.10 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
********** ********** * AGCCAAGGAU GACUUGCCGA UGUUAUCAAC AAAUCUUAAC UGAUUUUGGU GUCCGGCAAG 60 ((((((((-( (((((((((- ---((((((- -((((_____ _))))))))) )--))))))) UUGACCUUGG CU 72 )))-)))))) ))
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|430_45527-45619_1-21
- gnl|BL_ORD_ID|430_45527+45619_73-93