IGR sequence:igr4079#chr2#x1=18941708#l=2762
Mature miRNA sequence:AGGAGCUCCCUUCAAUCCAA
encoded miRNA:MIR88a
Precursor location:1395 - 1599 (negative strand)
precursor length:205 (71 basepairs)
MIR position:1 - 20 (1580 - 1599)
MIR length:20 (18 paired bases)
miRNA location TIGR v3:chr2:18943102<18943306
miRNA location TIGR v5:chr2:19001715<19001919
Folding energy:-86.70
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
AGGAGCUCCC UUCAAUCCAA ACGAAGAGAA GAGAAUGAUA UGUAGAGAAA GAGGGAGAAU    60
(((((((((( (((--((((( ((((((((-- ((-((-(((- ((--(((--( ((((-((((( 

                                                                  
CUAAGAGGUC GUGCAAUCCC CUUAAAGUGU GCUUUCUUCA AGCUUUUAAC ACCGCGCACU   120
(((((((-(( (((---(((- (----((((( ((________ __________ ___))))))) 

                                                                  
CUCUAUGAGG AAGACAUGAA CUCUUAGAUU CUGCAUUUUA GUUCCUCAAA UCUUGUCCUC   180
------)-)) )---)))))- )))))))))) ))-)-))))- -)))--))-) ))))-))))) 

                           
UUCGUUUUGG AGGAAGGGAG CUCCU  205
))))-))))) )-)))))))) )))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs