IGR sequence: | igr4069#chr3#x1=19080185#l=1539 |
---|---|
Mature miRNA sequence: | GAUAUUGGCGCGGCUCAAUCAGA |
encoded miRNA: | MIR30a |
Precursor location: | 1255 - 1346 (negative strand) |
precursor length: | 92 (32 basepairs) |
MIR position: | 1 - 23 (1324 - 1346) |
MIR length: | 23 (19 paired bases) |
miRNA location TIGR v3: | chr3:19081439<19081530 |
miRNA location TIGR v5: | chr3:19084429<19084520 |
Folding energy: | -30.10 |
BLAST hit against RFAM Atha miRNAs: | ath-MIR171 |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
********** ********** *** GAUAUUGGCG CGGCUCAAUC AGAUAAUCUA GAGAGAAUAA UGUAUAUCUA CGUGUGUGGU 60 (((((((((- -((-(((-(( ((((-((((- ((--(----( ((((____)) )))---)--) CAGGUAAGAU CUGAGUGAAC CAGGCCAAUA UC 92 )))))---)) ))))-)))-) )--))))))) ))

Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|3254_118318+118424_85-107
- gnl|BL_ORD_ID|3254_118318-118424_1-23