IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:AAUAGUUACUCCCUCCGUUUCAC
encoded miRNA:MIR23f
Precursor location:3099 - 3331 (negative strand)
precursor length:233 (75 basepairs)
MIR position:1 - 23 (3309 - 3331)
MIR length:23 (18 paired bases)
miRNA location TIGR v3:chr1:18835555<18835787
miRNA location TIGR v5:chr1:19239427<19239659
Folding energy:-58.84
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** ***                                         
AAUAGUUACU CCCUCCGUUU CACGAUAUAA AUUAUUUUAG CUAAAAGCAC GUAAAUUAAA    60
::::(-(((( (((((((((( (((((((((( -((-(((((( (((((,,,,, <<<<<<<<,, 

                                                                  
AAUAUUUACU UUUAAAAAGU UCAGCCAAUU AUAAAAGAAA CUGUAGAAUA UAAAUAAUCA   120
,,[[[[[[-[ [[[[---[[[ [[________ ______]-]] ]]-]]]]]-- ]]]]]],,,, 

                                                                  
UAAAGUAUUA AAGUAAUAUA UAAUUUGCAU AGAAACUUGA AAACAACUUA UAUUGUGAAA   180
,,,,[[[[[[ ___]]]]]], >>>>>>>>,, ,,,,,,[[[- --[[[[____ __]]]]---- 

                                                          
CAAAAAAUUU GGUCUAAAAC AACUUAUAUU GUGAAACGGA GGGAGUGCCA AAU  233
]]],,,,))) ))-))))))- ))-))))))) )))))))))) )))))))-): :::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs