IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:UUACUCCCUCCGUUUCACGAUAUAA
encoded miRNA:MIR23e
Precursor location:3105 - 3326 (negative strand)
precursor length:222 (74 basepairs)
MIR position:1 - 25 (3302 - 3326)
MIR length:25 (24 paired bases)
miRNA location TIGR v3:chr1:18835561<18835782
miRNA location TIGR v5:chr1:19239433<19239654
Folding energy:-57.74
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *****                                       
UUACUCCCUC CGUUUCACGA UAUAAAUUAU UUUAGCUAAA AGCACGUAAA UUAAAAAUAU    60
:((((((((( (((((((((( (((((-((-( (((((((((( ,,,,,<<<<< <<<,,,,[[[ 

                                                                  
UUACUUUUAA AAAGUUCAGC CAAUUAUAAA AGAAACUGUA GAAUAUAAAU AAUCAUAAAG   120
[[[-[[[[[- --[[[[[___ __________ _]-]]]]-]] ]]]--]]]]] ],,,,,,,,[ 

                                                                  
UAUUAAAGUA AUAUAUAAUU UGCAUAGAAA CUUGAAAACA ACUUAUAUUG UGAAACAAAA   180
[[[[[___]] ]]]],>>>>> >>>,,,,,,, ,[[[---[[[ [______]]] ]----]]],, 

                                              
AAUUUGGUCU AAAACAACUU AUAUUGUGAA ACGGAGGGAG UG  222
,,)))))-)) ))))-))-)) )))))))))) )))))))))) ))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs