IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:UUAUAUCGUGAAACGGAGGGAGUA
encoded miRNA:MIR23i
Precursor location:3106 - 3325 (positive strand)
precursor length:220 (73 basepairs)
MIR position:197 - 220 (3302 - 3325)
MIR length:24 (22 paired bases)
miRNA location TIGR v3:chr1:18835562>18835781
miRNA location TIGR v5:chr1:19239434>19239653
Folding energy:-62.70
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
ACUCCCUCCG UUUCACAAUA UAAGUUGUUU UAGACCAAAU UUUUUGUUUC ACAAUAUAAG    60
(((((((((( ((((((-((( (((((((((( (((,,,,,,, ,,<<<<---- <<<<<____> 

                                                                  
UUGUUUUCAA GUUUCUAUGC AAAUUAUAUA UUACUUUAAU ACUUUAUGAU UAUUUAUAUU   120
>>>>--->>> >,,,,<<<<- <<<<<<-<<< <<<<<<<,,, ,,,,[[[[[_ ___]]]]],, 

                                                                  
CUACAGUUUC UUUUAUAAUU GGCUGAACUU UUUAAAAGUA AAUAUUUUUA AUUUACGUGC   180
,,,[[[[[-- [[____]]-- ]]]]],,,,, ,,,,>>>>>- >>>>>--->> >>>>->>>>, 

                 **** ********** ********** 
UUUUAGCUAA AAUAAUUUAU AUCGUGAAAC GGAGGGAGUA   220
,,,,,,)))) )))))))))) ))-))))))) ))))))))):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs