IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:ACUCCCUCCGUUUCACGAUAUAAA
encoded miRNA:MIR23a
Precursor location:3106 - 3324 (negative strand)
precursor length:219 (73 basepairs)
MIR position:1 - 24 (3301 - 3324)
MIR length:24 (23 paired bases)
miRNA location TIGR v3:chr1:18835562<18835780
miRNA location TIGR v5:chr1:19239434<19239652
Folding energy:-56.54
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** ****                                        
ACUCCCUCCG UUUCACGAUA UAAAUUAUUU UAGCUAAAAG CACGUAAAUU AAAAAUAUUU    60
(((((((((( (((((((((( (((-((-((( ((((((((,, ,,,<<<<<<< <,,,,[[[[[ 

                                                                  
ACUUUUAAAA AGUUCAGCCA AUUAUAAAAG AAACUGUAGA AUAUAAAUAA UCAUAAAGUA   120
[-[[[[[--- [[[[[_____ _________] -]]]]-]]]] ]--]]]]]], ,,,,,,,[[[ 

                                                                  
UUAAAGUAAU AUAUAAUUUG CAUAGAAACU UGAAAACAAC UUAUAUUGUG AAACAAAAAA   180
[[[___]]]] ]],>>>>>>> >,,,,,,,,[ [[---[[[[_ _____]]]]- ---]]],,,, 

                                          
UUUGGUCUAA AACAACUUAU AUUGUGAAAC GGAGGGAGU  219
)))))-)))) ))-))-)))) )))))))))) )))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs