IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:ACUUAUAUUGUGAAACGGAG
encoded miRNA:MIR73t
Precursor location:3111 - 3319 (negative strand)
precursor length:209 (68 basepairs)
MIR position:190 - 209 (3111 - 3130)
MIR length:20 (19 paired bases)
miRNA location TIGR v3:chr1:18835567<18835775
miRNA location TIGR v5:chr1:19239439<19239647
Folding energy:-43.74
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CUCCGUUUCA CGAUAUAAAU UAUUUUAGCU AAAAGCACGU AAAUUAAAAA UAUUUACUUU    60
(((((((((( ((((((((-( (-(((((((( (((,,,,,<< <<<<<<,,,, [[[[[[-[[[ 

                                                                  
UAAAAAGUUC AGCCAAUUAU AAAAGAAACU GUAGAAUAUA AAUAAUCAUA AAGUAUUAAA   120
[[---[[[[[ __________ ____]-]]]] -]]]]]--]] ]]]],,,,,, ,,[[[[[[__ 

                                                                  
GUAAUAUAUA AUUUGCAUAG AAACUUGAAA ACAACUUAUA UUGUGAAACA AAAAAUUUGG   180
_]]]]]],>> >>>>>>,,,, ,,,,[[[--- [[[[______ ]]]]----]] ],,,,))))) 

         * ********** *********
UCUAAAACAA CUUAUAUUGU GAAACGGAG  209
-))))))-)) -))))))))) )))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs