IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:CUUAUAUUGUGAAACGGAGG
encoded miRNA:MIR89s
Precursor location:3110 - 3320 (negative strand)
precursor length:211 (69 basepairs)
MIR position:192 - 211 (3110 - 3129)
MIR length:20 (19 paired bases)
miRNA location TIGR v3:chr1:18835566<18835776
miRNA location TIGR v5:chr1:19239438<19239648
Folding energy:-47.04
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CCUCCGUUUC ACGAUAUAAA UUAUUUUAGC UAAAAGCACG UAAAUUAAAA AUAUUUACUU    60
(((((((((( (((((((((- ((-((((((( ((((,,,,,< <<<<<<<,,, ,[[[[[[-[[ 

                                                                  
UUAAAAAGUU CAGCCAAUUA UAAAAGAAAC UGUAGAAUAU AAAUAAUCAU AAAGUAUUAA   120
[[[---[[[[ [_________ _____]-]]] ]-]]]]]--] ]]]]],,,,, ,,,[[[[[[_ 

                                                                  
AGUAAUAUAU AAUUUGCAUA GAAACUUGAA AACAACUUAU AUUGUGAAAC AAAAAAUUUG   180
__]]]]]],> >>>>>>>,,, ,,,,,[[[-- -[[[[_____ _]]]]----] ]],,,,)))) 

            ********* ********** *
GUCUAAAACA ACUUAUAUUG UGAAACGGAG G  211
)-))))))-) )-)))))))) )))))))))) )

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs