IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:CUCCCUCCGUUUCACAAUAUAAGUU
encoded miRNA:MIR89n
Precursor location:3107 - 3323 (positive strand)
precursor length:217 (72 basepairs)
MIR position:1 - 25 (3107 - 3131)
MIR length:25 (24 paired bases)
miRNA location TIGR v3:chr1:18835563>18835779
miRNA location TIGR v5:chr1:19239435>19239651
Folding energy:-60.30
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *****                                       
CUCCCUCCGU UUCACAAUAU AAGUUGUUUU AGACCAAAUU UUUUGUUUCA CAAUAUAAGU    60
(((((((((( (((((-(((( (((((((((( ((,,,,,,,, ,<<<<----< <<<<____>> 

                                                                  
UGUUUUCAAG UUUCUAUGCA AAUUAUAUAU UACUUUAAUA CUUUAUGAUU AUUUAUAUUC   120
>>>--->>>> ,,,,<<<<-< <<<<<-<<<< <<<<<<,,,, ,,,[[[[[__ __]]]]],,, 

                                                                  
UACAGUUUCU UUUAUAAUUG GCUGAACUUU UUAAAAGUAA AUAUUUUUAA UUUACGUGCU   180
,,[[[[[--[ [____]]--] ]]]],,,,,, ,,,>>>>>-> >>>>--->>> >>>->>>>,, 

                                        
UUUAGCUAAA AUAAUUUAUA UCGUGAAACG GAGGGAG  217
,,,,,))))) )))))))))) )-)))))))) )))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs