IGR sequence:igr3964#chr1#x1=18832457#l=4446
Mature miRNA sequence:ACUCCCUCCGUUUCACAAUAUAAGU
encoded miRNA:MIR89l
Precursor location:3106 - 3324 (positive strand)
precursor length:219 (73 basepairs)
MIR position:1 - 25 (3106 - 3130)
MIR length:25 (24 paired bases)
miRNA location TIGR v3:chr1:18835562>18835780
miRNA location TIGR v5:chr1:19239434>19239652
Folding energy:-62.00
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *****                                       
ACUCCCUCCG UUUCACAAUA UAAGUUGUUU UAGACCAAAU UUUUUGUUUC ACAAUAUAAG    60
(((((((((( ((((((-((( (((((((((( (((,,,,,,, ,,<<<<---- <<<<<____> 

                                                                  
UUGUUUUCAA GUUUCUAUGC AAAUUAUAUA UUACUUUAAU ACUUUAUGAU UAUUUAUAUU   120
>>>>--->>> >,,,,<<<<- <<<<<<-<<< <<<<<<<,,, ,,,,[[[[[_ ___]]]]],, 

                                                                  
CUACAGUUUC UUUUAUAAUU GGCUGAACUU UUUAAAAGUA AAUAUUUUUA AUUUACGUGC   180
,,,[[[[[-- [[____]]-- ]]]]],,,,, ,,,,>>>>>- >>>>>--->> >>>>->>>>, 

                                          
UUUUAGCUAA AAUAAUUUAU AUCGUGAAAC GGAGGGAGU  219
,,,,,,)))) )))))))))) ))-))))))) )))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs