IGR sequence: | igr3883#chr5#x1=19112826#l=3251 |
---|---|
Mature miRNA sequence: | UUAUAUUGUGAAACUGAGGGAGUA |
encoded miRNA: | MIR32g |
Precursor location: | 1238 - 1456 (negative strand) |
precursor length: | 219 (65 basepairs) |
MIR position: | 196 - 219 (1238 - 1261) |
MIR length: | 24 (23 paired bases) |
miRNA location TIGR v3: | chr5:19114063<19114281 |
miRNA location TIGR v5: | chr5:19523121<19523339 |
Folding energy: | -48.50 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
UACUCCUUUU GUUUUACAAU AUAAGUUGUU UUAGCUAAAA ACACACAAGU UAAGAAUAUU 60 (((((((((- (((((((((( ((((-((((( ((-(((((,, ,,,,,<<<<< <,,[[-[[[[ UACUUUUAAA AAGUUUAACC AAUUAUAAAA GAGACUGCAU UAUAGAAAUA AUCAUAAAAU 120 [-[[------ -[[[[[____ __________ _]]]]]---- ---]]]]]]] -]],,,,,,, AUUAAAAUUA UAUAAUUUGU AUAGAAACUU GAAAACAACU AAUAUUGUAA AAUAAAAAAG 180 ,,,,,,,[[[ [[[_____]] ]]]],>>>>> >,,,[[[[__ ____]]]],, ,,,,,,,,,, ***** ********** ********* UUAGUCCAAA ACAAAUUAUA UUGUGAAACU GAGGGAGUA 219 )))))--))) ))))-))))) )))))))))- )))))))))
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|2452_11232-11349_95-118
- gnl|BL_ORD_ID|2452_11232+11349_1-24
- gnl|BL_ORD_ID|2450_8543+8660_1-24
- gnl|BL_ORD_ID|2450_8543-8660_95-118
- gnl|BL_ORD_ID|1162_61389+61540_1-24
- gnl|BL_ORD_ID|1162_61389-61540_129-152
- gnl|BL_ORD_ID|3581_50164+50317_1-24
- gnl|BL_ORD_ID|3581_50164-50317_131-154
- gnl|BL_ORD_ID|3549_139542+139695_1-24
- gnl|BL_ORD_ID|3549_139542-139695_131-154
- gnl|BL_ORD_ID|3537_118706+118868_1-24
- gnl|BL_ORD_ID|3537_118706-118868_140-163
- gnl|BL_ORD_ID|3508_166488+166641_1-24
- gnl|BL_ORD_ID|3508_166488-166641_131-154
- gnl|BL_ORD_ID|3501_9254+9407_1-24
- gnl|BL_ORD_ID|3501_9254-9407_131-154
- gnl|BL_ORD_ID|3475_89604+89757_1-24
- gnl|BL_ORD_ID|3475_89604-89757_131-154
- gnl|BL_ORD_ID|3474_82136+82289_1-24
- gnl|BL_ORD_ID|3474_82136-82289_131-154
- gnl|BL_ORD_ID|3453_35119-35269_128-151
- gnl|BL_ORD_ID|3453_35119+35269_1-24
- gnl|BL_ORD_ID|3408_48927-49078_129-152
- gnl|BL_ORD_ID|3408_48927+49078_1-24
- gnl|BL_ORD_ID|3379_58501+58654_1-24
- gnl|BL_ORD_ID|3379_58501-58654_131-154
- gnl|BL_ORD_ID|3349_73470-73623_131-154
- gnl|BL_ORD_ID|3349_73470+73623_1-24
- gnl|BL_ORD_ID|3319_74583+74740_1-24
- gnl|BL_ORD_ID|3319_74583-74740_135-158
- gnl|BL_ORD_ID|3242_63872-64049_155-178
- gnl|BL_ORD_ID|3224_110155+110308_1-24
- gnl|BL_ORD_ID|3224_110155-110308_131-154
- gnl|BL_ORD_ID|3196_76040+76183_1-24
- gnl|BL_ORD_ID|3196_76040-76183_121-144
- gnl|BL_ORD_ID|3104_49296-49448_130-153
- gnl|BL_ORD_ID|3097_53755-53867_90-113
- gnl|BL_ORD_ID|3097_53755+53867_1-24
- gnl|BL_ORD_ID|3084_165823-165907_62-85
- gnl|BL_ORD_ID|3084_165823+165907_1-24
- gnl|BL_ORD_ID|3023_1789+1939_1-24
- gnl|BL_ORD_ID|3023_1789-1939_128-151
- gnl|BL_ORD_ID|3008_36404+36557_1-24
- gnl|BL_ORD_ID|3008_36404-36557_131-154
- gnl|BL_ORD_ID|2997_10623+10750_1-24
- gnl|BL_ORD_ID|2997_10623-10750_105-128
- gnl|BL_ORD_ID|2891_107986-108137_129-152
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- gnl|BL_ORD_ID|2836_99458+99610_1-24
- gnl|BL_ORD_ID|2810_23068+23221_1-24
- gnl|BL_ORD_ID|2810_23068-23221_131-154
- gnl|BL_ORD_ID|2773_42284+42437_1-24
- gnl|BL_ORD_ID|2773_42284-42437_131-154
- gnl|BL_ORD_ID|2744_67557+67699_1-24
- gnl|BL_ORD_ID|2744_67557-67699_120-143
- gnl|BL_ORD_ID|2691_11208-11361_131-154
- gnl|BL_ORD_ID|2691_11208+11361_1-24
- gnl|BL_ORD_ID|2629_149254-149379_103-126
- gnl|BL_ORD_ID|2629_149254+149379_1-24
- gnl|BL_ORD_ID|2562_55004+55157_1-24
- gnl|BL_ORD_ID|2562_55004-55157_131-154
- gnl|BL_ORD_ID|2531_32550-32703_131-154
- gnl|BL_ORD_ID|2531_32550+32703_1-24
- gnl|BL_ORD_ID|2511_100930+101061_1-24
- gnl|BL_ORD_ID|2511_100930-101061_109-132
- gnl|BL_ORD_ID|2472_80256-80409_131-154
- gnl|BL_ORD_ID|2472_80256+80409_1-24
- gnl|BL_ORD_ID|2457_48424+48577_1-24
- gnl|BL_ORD_ID|2457_48424-48577_131-154
- gnl|BL_ORD_ID|2434_43786+43923_1-24
- gnl|BL_ORD_ID|2434_43786-43923_115-138
- gnl|BL_ORD_ID|2415_44046-44199_131-154
- gnl|BL_ORD_ID|2415_44046+44199_1-24
- gnl|BL_ORD_ID|2382_110632-110759_105-128
- gnl|BL_ORD_ID|2382_110632+110759_1-24
- gnl|BL_ORD_ID|2358_48592+48745_1-24
- gnl|BL_ORD_ID|2358_48592-48745_131-154
- gnl|BL_ORD_ID|2322_113326-113419_71-94
- gnl|BL_ORD_ID|2322_113326+113419_1-24
- gnl|BL_ORD_ID|2257_39263+39416_1-24
- gnl|BL_ORD_ID|2257_39263-39416_131-154
- gnl|BL_ORD_ID|2223_13637-13790_131-154
- gnl|BL_ORD_ID|2220_92634+92787_1-24
- gnl|BL_ORD_ID|2220_92634-92787_131-154
- gnl|BL_ORD_ID|2160_104516-104591_53-76
- gnl|BL_ORD_ID|2119_136501-136622_99-122
- gnl|BL_ORD_ID|2119_136501+136622_1-24
- gnl|BL_ORD_ID|2083_29588-29743_133-156
- gnl|BL_ORD_ID|2083_29588+29743_1-24
- gnl|BL_ORD_ID|2078_59526-59657_109-132
- gnl|BL_ORD_ID|2078_59526+59657_1-24
- gnl|BL_ORD_ID|2070_111379+111546_1-24
- gnl|BL_ORD_ID|2070_111379-111546_145-168
- gnl|BL_ORD_ID|2038_110108+110261_1-24
- gnl|BL_ORD_ID|2038_110108-110261_131-154
- gnl|BL_ORD_ID|2028_117710+117799_1-24
- gnl|BL_ORD_ID|2028_117710-117799_67-90
- gnl|BL_ORD_ID|1986_130790-130941_129-152
- gnl|BL_ORD_ID|1986_130790+130941_1-24
- gnl|BL_ORD_ID|1974_15648+15801_1-24
- gnl|BL_ORD_ID|1974_15648-15801_131-154
- gnl|BL_ORD_ID|1963_4044-4197_131-154
- gnl|BL_ORD_ID|1963_4044+4197_1-24
- gnl|BL_ORD_ID|1960_66865-67018_131-154
- gnl|BL_ORD_ID|1960_66865+67018_1-24
- gnl|BL_ORD_ID|1948_32702-32821_97-120
- gnl|BL_ORD_ID|1948_32702+32821_1-24
- gnl|BL_ORD_ID|1947_3294-3413_97-120
- gnl|BL_ORD_ID|1947_3294+3413_1-24
- gnl|BL_ORD_ID|1944_72087+72204_1-24
- gnl|BL_ORD_ID|1944_72087-72204_95-118
- gnl|BL_ORD_ID|1931_29451-29604_131-154
- gnl|BL_ORD_ID|1931_29451+29604_1-24
- gnl|BL_ORD_ID|1911_34559-34712_131-154
- gnl|BL_ORD_ID|1911_34559+34712_1-24
- gnl|BL_ORD_ID|1904_135863-136015_130-153
- gnl|BL_ORD_ID|1904_135863+136015_1-24
- gnl|BL_ORD_ID|1823_139736-139860_102-125
- gnl|BL_ORD_ID|1823_139736+139860_1-24
- gnl|BL_ORD_ID|1771_14958+15089_1-24
- gnl|BL_ORD_ID|1771_14958-15089_109-132
- gnl|BL_ORD_ID|1741_118026+118179_1-24
- gnl|BL_ORD_ID|1741_118026-118179_131-154
- gnl|BL_ORD_ID|1660_43709+43795_1-24
- gnl|BL_ORD_ID|1660_43709-43795_64-87
- gnl|BL_ORD_ID|1596_34205-34357_130-153
- gnl|BL_ORD_ID|1593_29154+29307_1-24
- gnl|BL_ORD_ID|1593_29154-29307_131-154
- gnl|BL_ORD_ID|1588_134345+134498_1-24
- gnl|BL_ORD_ID|1588_134345-134498_131-154
- gnl|BL_ORD_ID|1509_133069+133220_1-24
- gnl|BL_ORD_ID|1509_133069-133220_129-152
- gnl|BL_ORD_ID|1407_25847-25922_53-76
- gnl|BL_ORD_ID|1396_51731-51884_131-154
- gnl|BL_ORD_ID|1396_51731+51884_1-24
- gnl|BL_ORD_ID|1387_141361-141532_149-172
- gnl|BL_ORD_ID|1387_141361+141532_1-24
- gnl|BL_ORD_ID|1324_44088-44241_131-154
- gnl|BL_ORD_ID|1324_44088+44241_1-24
- gnl|BL_ORD_ID|1206_7797-7950_131-154
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- gnl|BL_ORD_ID|1105_34334+34487_1-24
- gnl|BL_ORD_ID|1105_34334-34487_131-154
- gnl|BL_ORD_ID|1086_96945+97098_1-24
- gnl|BL_ORD_ID|1086_96945-97098_131-154
- gnl|BL_ORD_ID|1068_100213-100368_133-156
- gnl|BL_ORD_ID|1068_100213+100368_1-24
- gnl|BL_ORD_ID|1006_23898+24023_1-24
- gnl|BL_ORD_ID|1006_23898-24023_103-126
- gnl|BL_ORD_ID|989_94435+94588_1-24
- gnl|BL_ORD_ID|989_94435-94588_131-154
- gnl|BL_ORD_ID|975_106312-106465_131-154
- gnl|BL_ORD_ID|975_106312+106465_1-24
- gnl|BL_ORD_ID|933_86930-87083_131-154
- gnl|BL_ORD_ID|933_86930+87083_1-24
- gnl|BL_ORD_ID|904_56849-56976_105-128
- gnl|BL_ORD_ID|904_56849+56976_1-24
- gnl|BL_ORD_ID|856_4849-5002_131-154
- gnl|BL_ORD_ID|856_4849+5002_1-24
- gnl|BL_ORD_ID|826_67816-67912_74-97
- gnl|BL_ORD_ID|826_67816+67913_1-24
- gnl|BL_ORD_ID|815_98990-99143_131-154
- gnl|BL_ORD_ID|815_98990+99143_1-24
- gnl|BL_ORD_ID|732_95854+96007_1-24
- gnl|BL_ORD_ID|732_95854-96007_131-154
- gnl|BL_ORD_ID|634_50557-50710_131-154
- gnl|BL_ORD_ID|634_50557+50710_1-24
- gnl|BL_ORD_ID|622_4024-4148_102-125
- gnl|BL_ORD_ID|622_4024+4148_1-24
- gnl|BL_ORD_ID|558_13354-13507_131-154
- gnl|BL_ORD_ID|558_13354+13507_1-24
- gnl|BL_ORD_ID|515_104617+104754_1-24
- gnl|BL_ORD_ID|515_104617-104754_115-138
- gnl|BL_ORD_ID|483_113050-113200_128-151
- gnl|BL_ORD_ID|483_113050+113200_1-24