IGR sequence:igr3883#chr5#x1=19112826#l=3251
Mature miRNA sequence:UUAUAUUGUGAAACUGAGGGAGUAU
encoded miRNA:MIR32d
Precursor location:1237 - 1457 (negative strand)
precursor length:221 (66 basepairs)
MIR position:197 - 221 (1237 - 1261)
MIR length:25 (24 paired bases)
miRNA location TIGR v3:chr5:19114062<19114282
miRNA location TIGR v5:chr5:19523120<19523340
Folding energy:-49.90
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
GUACUCCUUU UGUUUUACAA UAUAAGUUGU UUUAGCUAAA AACACACAAG UUAAGAAUAU    60
(((((((((( -((((((((( (((((-(((( (((-(((((, ,,,,,,<<<< <<,,[[-[[[ 

                                                                  
UUACUUUUAA AAAGUUUAAC CAAUUAUAAA AGAGACUGCA UUAUAGAAAU AAUCAUAAAA   120
[[-[[----- --[[[[[___ __________ __]]]]]--- ----]]]]]] ]-]],,,,,, 

                                                                  
UAUUAAAAUU AUAUAAUUUG UAUAGAAACU UGAAAACAAC UAAUAUUGUA AAAUAAAAAA   180
,,,,,,,,[[ [[[[_____] ]]]]],>>>> >>,,,[[[[_ _____]]]], ,,,,,,,,,, 

                 **** ********** ********** *
GUUAGUCCAA AACAAAUUAU AUUGUGAAAC UGAGGGAGUA U  221
,)))))--)) )))))-)))) )))))))))) -))))))))) )

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs