IGR sequence:igr3768#chr5#x1=18615936#l=2646
Mature miRNA sequence:GUGGCAUACAGGGAGCCAGGCAUA
encoded miRNA:MIR40a
Precursor location:1331 - 1414 (positive strand)
precursor length:84 (32 basepairs)
MIR position:61 - 84 (1391 - 1414)
MIR length:24 (21 paired bases)
miRNA location TIGR v3:chr5:18617266>18617349
miRNA location TIGR v5:chr5:19026324>19026407
Folding energy:-44.00
BLAST hit against RFAM Atha miRNAs:ath-MIR160c
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
AUGCUUGACU CCUUGUACGC CACCGGCAGC CGAUUUUAAA ACCAAAAUCG GUAUCCACUC    60
(((((((-(( (((((((-(( (((-((--(( (((((((___ ___))))))) ))--))---- 

********** ********** ****
GUGGCAUACA GGGAGCCAGG CAUA   84
)))))-)))) )))))-)))) ))):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs