IGR sequence:igr3576#chr3#x1=16853469#l=1311
Mature miRNA sequence:UACUCCCUCCUUGUUUUAAUAG
encoded miRNA:MIR3
Precursor location:954 - 1193 (positive strand)
precursor length:240 (80 basepairs)
MIR position:1 - 22 (954 - 975)
MIR length:22 (18 paired bases)
miRNA location TIGR v3:chr3:16854422>16854661
miRNA location TIGR v5:chr3:16857412>16857651
Folding energy:-62.40
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** **                                          
UACUCCCUCC UUGUUUUAAU AGUUGAUGUU UUAGAGAAAA ACGUUUGUUC CAAAUUAUAU    60
((((((((-( ---((((((( (((((((((( ((-((((,<< <<<<<<<<__ ______>>>- 

                                                                  
AAUGUUUCAG UUGUCAAUAC AAUAUUCAUU AAUUUUUAUU GUUUUUGACU AUUUAUCUUC   120
>>>>>>>,,, ,,<<<<<-<< <<<<______ ______>>>> >>-->>>>>, ,,,,,<<<-- 

                                                                  
CGCAGAGUGU UAUAUCAUUG GUUGAAUUGU GUGUAGAUAA UUAAUUAUUG UUAUUUUAGU   180
<<<<,[[[[_ _____]]]], [[[[[[[[[- ----[[[[[[ [________] ]]]]]]---- 

                                                                  
UUGAUUCAAU AAUAUGUGUG AGAAAUCUUA AAACAUCAAU UAUUAAAAAC GUAGGGAGUA   240
-]]]]]]]]] ,,,,>>>>-- >>>,,))))) )))))))))) ))))))))-- )-))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs