IGR sequence:igr3494#chr2#x1=16598245#l=6010
Mature miRNA sequence:GAUCAAUGCGAUCCCUUUGGA
encoded miRNA:MIR20a
Precursor location:2332 - 2444 (negative strand)
precursor length:113 (36 basepairs)
MIR position:93 - 113 (2332 - 2352)
MIR length:21 (18 paired bases)
miRNA location TIGR v3:chr2:16600576<16600688
miRNA location TIGR v5:chr2:16659189<16659301
Folding energy:-33.80
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UCCAAAGAGA UAGCAUGAUC CAAAACCAAG CAAAUUUUUG UGAUUUAUUU GCCAAUUAUA    60
(((((((-(( (-(((((((( (,,,,,,,,, ,,,,<<<<<< <<<<<_____ ___>>>>>>> 

                                   ******** ********** ***
AAGAAAAUAU GGGGAGAAUU CACCUUAAUU AGGAUCAAUG CGAUCCCUUU GGA  113
>>>>,,,,,< <<<<-<____ >->>>>>,,, ,)))))-))) )-)))-)))) )))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs