IGR sequence:igr3459#chr5#x1=17123821#l=3126
Mature miRNA sequence:UGAGGGGAAUGAAGCCUGGU
encoded miRNA:MIR70b
Precursor location:731 - 1081 (negative strand)
precursor length:351 (117 basepairs)
MIR position:332 - 351 (731 - 750)
MIR length:20 (19 paired bases)
miRNA location TIGR v3:chr5:17124551<17124901
miRNA location TIGR v5:chr5:17533609<17533959
Folding energy:-101.80
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
ACCAGGCUUC CUUCCCCUCA ACUUUACUCG GUGAUCUGUU ACUCUUAUAU AUAUGCAUGC    60
(((((((((( -((((((((( (((((((,<< <<-<<<<<-- -<<<<--<<, ,[[[[-[[[[ 

                                                                  
AUGUCAAAAG AAAUUUCGAU UAUAUUAUUU CUCUUAAUCA GCAAGGUUUA ACAGAUAUAU   120
,,{{{-{{{_ ___}}}-}}} ,,,,,,,{{{ {{{{{{{{{- {{{,,,,,,, ,((----((( 

                                                                  
UAAGGAAACA AUUUUAAUAG AUAUGCCUAA UGUGUUUUUG AUAUACACCA UAUUAUAUAC   180
((((____)- ---))))))- ---)),,((( (((((---(( ((((_____) )))))-)))) 

                                                                  
AUUGCUGCGG AUUGAUGAUG AAAGACGCAU ACAUACAAAA AAAGAUGAUA UACACGGAUA   240
)))),}}}-} }}}}}-}}-} }}},,,]]]] -]]]](((-- ((((((((-- -(((--(((_ 

                                                                  
CACCAUUUAU GUUCAUCUUU CUUGGCUUAC UAGAGAAUUA GGUGAUCGGC UAACGAUUGG   300
____)))--) )))))))))) -))),,,>>- ->>>>--->> >>>->>>>(( (-----(--( 

                                  ********* ********** *
UCUUGAAGAU UGAGAAGCAA AACGUGUAAG UUGAGGGGAA UGAAGCCUGG U  351
((_____))) --)--))),, ,,,)))-))) )))))))))) -))))))))) )

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs