IGR sequence:igr3459#chr5#x1=17123821#l=3126
Mature miRNA sequence:UCGGACCAGGCUUCAUUCCCC
encoded miRNA:MIR70e
Precursor location:727 - 1085 (positive strand)
precursor length:359 (115 basepairs)
MIR position:1 - 21 (727 - 747)
MIR length:21 (18 paired bases)
miRNA location TIGR v3:chr5:17124547>17124905
miRNA location TIGR v5:chr5:17533605>17533963
Folding energy:-105.52
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
UCGGACCAGG CUUCAUUCCC CUCAACUUAC ACGUUUUGCU UCUCAAUCUU CAAGACCAAU    60
::(((((((( ((((-((((( (((((((((( ,,<<<<<<__ __________ >>>>>>,,,, 

                                                                  
CGUUAGCCGA UCACCUAAUU CUCUAGUAAG CCAAGAAAGA UGAACAUAAA UGGUGUAUCC   120
,,,,,,,,<< <<-------- <<<<-<<<,, ,,[[[[[[[[ [[[--[[[-[ [[[_____]] 

                                                                  
GUGUAUAUCA UCUUUUUUUG UAUGUAUGCG UCUUUCAUCA UCAAUCCGCA GCAAUGUAUA   180
]]-]]]-]]] ]]]]]]]][[ [[[[[[[[[[ [,,,,,,,,, ,,,,,,,,{{ {{{{-{{--- 

                                                                  
UAAUAUGGUG UAUAUCAAAA ACACAUUAGG CAUAUCUAUU AAAAUUGUUU CCUUAAUAUA   240
{{{{{-{{{{ {{{-----{{ {{{---{{{{ ____}}}}-- -----}}}}} -----}}}}} 

                                                                  
UCUGUUAAAC CUUGCUGAUU AAGAGAAAUA AUAUAAUCGA AAUUUCUUUU GACAUGCAUG   300
}}}}}}}-}} -}}}}}},{{ {{{{{{{{{_ __________ _}}}}}}}}} }},]]]]]]] 

                                                                
CAUAUAUAUA AGAGUAACAG AUCACCGAGU AAAGUUGAGG GGAAGGAAGC CUGGUUUAA  359
]]]]]]>>>- >>>>-----> >>>,,,,,)) -))))))))) ))))-))))) )))))))::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs