IGR sequence:igr3289#chr5#x1=16380038#l=5991
Mature miRNA sequence:UCGGACCAGGCUUCAUUCCCC
encoded miRNA:MIR70e
Precursor location:3657 - 3791 (negative strand)
precursor length:135 (44 basepairs)
MIR position:115 - 135 (3657 - 3677)
MIR length:21 (17 paired bases)
miRNA location TIGR v3:chr5:16383694<16383828
miRNA location TIGR v5:chr5:16792752<16792886
Folding energy:-42.20
BLAST hit against RFAM Atha miRNAs:ath-MIR166e
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
GGGGAAUGUU GUCUGGCACG AGGCCCUUAA CUUAGAUCUA UAUUUGAUUA UAUAUAUAUG    60
((((((((-- ((((((--(( (-(-(-(((( ((,<<<<-<< <<<_______ ___>>>>>-> 

                                                           ****** 
UCUCUUCUUU AUUCAUUAGU CUAUACAUGA AUGAUCAUUU UACGGUUAAU GACGUCGGAC   120
>>>,,,,,<< <<<<<<<<__ ___>>->>>> >>>>,,,,,, ,,,))))))- )-)-)))--) 

********** *****
CAGGCUUCAU UCCCC  135
)))))--))) )))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs