IGR sequence:igr3289#chr5#x1=16380038#l=5991
Mature miRNA sequence:UCGGACCAGGCUUCAUUCCCCUCAA
encoded miRNA:MIR70a
Precursor location:3653 - 3795 (negative strand)
precursor length:143 (47 basepairs)
MIR position:119 - 143 (3653 - 3677)
MIR length:25 (20 paired bases)
miRNA location TIGR v3:chr5:16383690<16383832
miRNA location TIGR v5:chr5:16792748<16792890
Folding energy:-49.30
BLAST hit against RFAM Atha miRNAs:ath-MIR166e
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UUGAGGGGAA UGUUGUCUGG CACGAGGCCC UUAACUUAGA UCUAUAUUUG AUUAUAUAUA    60
:((((((((( ((--(((((( --(((-(-(- ((((((,<<< <-<<<<<___ _______>>> 

                                                               ** 
UAUGUCUCUU CUUUAUUCAU UAGUCUAUAC AUGAAUGAUC AUUUUACGGU UAAUGACGUC   120
>>->>>>,,, ,,<<<<<<<< <<_____>>- >>>>>>>>,, ,,,,,,,))) )))-)-)-)) 

********** ********** ***
GGACCAGGCU UCAUUCCCCU CAA  143
)--))))))- -))))))))) )):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs