IGR sequence:igr3268#chr5#x1=16266119#l=7505
Mature miRNA sequence:UGCUUGGACUGAAGGGAGCUCCCU
encoded miRNA:MIR69
Precursor location:2521 - 2692 (negative strand)
precursor length:172 (65 basepairs)
MIR position:149 - 172 (2521 - 2544)
MIR length:24 (19 paired bases)
miRNA location TIGR v3:chr5:16268639<16268810
miRNA location TIGR v5:chr5:16677697<16677868
Folding energy:-80.80
BLAST hit against RFAM Atha miRNAs:ath-MIR319b
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
AGAGAGCUUU CUUCGGUCCA CUCAUGGAGU AAUAUGUGAG AUUUAAUUGA CUCUCGACUC    60
((-(((((-- (((((((((( --(((((((- -----((((( ((((((((-- ((((((--(( 

                                                                  
AUUCAUCCAA AUACCAAAUG AAAGAAUUUG UUCUCAUAUG GUAAAUGAAU GAAUGAUGCG   120
((((((-((- -(((((-((( (--(((____ )))))))-)) )))--))-)) ))))))--)) 

                              ** ********** ********** **
AGAGACAAAU UGAGUCUUCA CUUCUCUAUG CUUGGACUGA AGGGAGCUCC CU  172
))))---))) ))))))-))) )--))))))) --)))))))) ))--)))))- ))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs