Gene Ontology terms associated with a binding site

Binding site
Motif_93
Name
RGATAOS
Description
R-GATA (GATA motif binding factor) binding site; GATA motif is found at -143 to -135 of RTBV promoter; GATA motif is required for phloem-specific gene expression of Rice Tungro Bacilliform Virus (RTBV); See also RNFG1OS, RNFG2OS, and ABFOS
#Associated genes
155
#Associated GO terms
1039
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell83 (53.55%)6823201484216
GO:0044464cell part83 (53.55%)6823201484216
GO:0005622intracellular74 (47.74%)5823181184213
GO:0044424intracellular part71 (45.81%)5823161174213
GO:0043229intracellular organelle64 (41.29%)572315974210
GO:0043226organelle64 (41.29%)572315974210
GO:0043231intracellular membrane-bounded organelle60 (38.71%)57131577429
GO:0043227membrane-bounded organelle60 (38.71%)57131577429
GO:0005634nucleus41 (26.45%)53031244325
GO:0005737cytoplasm39 (25.16%)1811875206
GO:0044444cytoplasmic part33 (21.29%)1711663206
GO:0016020membrane26 (16.77%)1301772104
GO:0044446intracellular organelle part21 (13.55%)0311363112
GO:0044422organelle part21 (13.55%)0311363112
GO:0071944cell periphery14 (9.03%)1101340103
GO:0016021integral to membrane11 (7.10%)0000432002
GO:0031224intrinsic to membrane11 (7.10%)0000432002
GO:0044425membrane part11 (7.10%)0000432002
GO:0005886plasma membrane11 (7.10%)1100240003
GO:0043232intracellular non-membrane-bounded organelle10 (6.45%)0110221111
GO:0043228non-membrane-bounded organelle10 (6.45%)0110221111
GO:0009536plastid10 (6.45%)0201330100
GO:0009507chloroplast9 (5.81%)0101330100
GO:0032991macromolecular complex9 (5.81%)0111022002
GO:0043234protein complex9 (5.81%)0111022002
GO:0005773vacuole9 (5.81%)0201021102
GO:0005829cytosol8 (5.16%)0200120102
GO:0030054cell junction7 (4.52%)1200211000
GO:0005911cell-cell junction7 (4.52%)1200211000
GO:0070013intracellular organelle lumen7 (4.52%)0101200111
GO:0031974membrane-enclosed lumen7 (4.52%)0101200111
GO:0005739mitochondrion7 (4.52%)1101021100
GO:0043233organelle lumen7 (4.52%)0101200111
GO:0009506plasmodesma7 (4.52%)1200211000
GO:0055044symplast7 (4.52%)1200211000
GO:0044430cytoskeletal part6 (3.87%)0110021001
GO:0005856cytoskeleton6 (3.87%)0110021001
GO:0044428nuclear part6 (3.87%)0000211110
GO:0044434chloroplast part5 (3.23%)0001130000
GO:0005783endoplasmic reticulum5 (3.23%)0200010002
GO:0005871kinesin complex5 (3.23%)0110011001
GO:0005875microtubule associated complex5 (3.23%)0110011001
GO:0015630microtubule cytoskeleton5 (3.23%)0110011001
GO:0031090organelle membrane5 (3.23%)0101011100
GO:0044435plastid part5 (3.23%)0001130000
GO:0031981nuclear lumen4 (2.58%)0000200110
GO:0005774vacuolar membrane4 (2.58%)0101010100
GO:0044437vacuolar part4 (2.58%)0101010100
GO:1902494catalytic complex3 (1.94%)0001001001
GO:0009570chloroplast stroma3 (1.94%)0001020000
GO:0031975envelope3 (1.94%)0001200000
GO:0030312external encapsulating structure3 (1.94%)0001100100
GO:0005576extracellular region3 (1.94%)0001110000
GO:0009532plastid stroma3 (1.94%)0001020000
GO:0000151ubiquitin ligase complex3 (1.94%)0001001001
GO:0005794Golgi apparatus2 (1.29%)0010100000
GO:0048046apoplast2 (1.29%)0001010000
GO:0005618cell wall2 (1.29%)0001000100
GO:0009941chloroplast envelope2 (1.29%)0001100000
GO:0000785chromatin2 (1.29%)0000200000
GO:0044427chromosomal part2 (1.29%)0000200000
GO:0005694chromosome2 (1.29%)0000200000
GO:0031461cullin-RING ubiquitin ligase complex2 (1.29%)0001001000
GO:0005788endoplasmic reticulum lumen2 (1.29%)0100000001
GO:0044432endoplasmic reticulum part2 (1.29%)0100000001
GO:0000791euchromatin2 (1.29%)0000200000
GO:0000792heterochromatin2 (1.29%)0000200000
GO:0042579microbody2 (1.29%)0100001000
GO:0000790nuclear chromatin2 (1.29%)0000200000
GO:0000228nuclear chromosome2 (1.29%)0000200000
GO:0044454nuclear chromosome part2 (1.29%)0000200000
GO:0005720nuclear heterochromatin2 (1.29%)0000200000
GO:0005730nucleolus2 (1.29%)0000000110
GO:0031967organelle envelope2 (1.29%)0001100000
GO:0005777peroxisome2 (1.29%)0100001000
GO:0009526plastid envelope2 (1.29%)0001100000
GO:0009579thylakoid2 (1.29%)0001100000
GO:0005802trans-Golgi network2 (1.29%)0010100000
GO:0019005SCF ubiquitin ligase complex1 (0.65%)0001000000
GO:0015629actin cytoskeleton1 (0.65%)0000010000
GO:0005884actin filament1 (0.65%)0000010000
GO:0005680anaphase-promoting complex1 (0.65%)0000001000
GO:0030313cell envelope1 (0.65%)0000100000
GO:0009534chloroplast thylakoid1 (0.65%)0000100000
GO:0009535chloroplast thylakoid membrane1 (0.65%)0000100000
GO:0016023cytoplasmic membrane-bounded vesicle1 (0.65%)0000100000
GO:0031410cytoplasmic vesicle1 (0.65%)0000100000
GO:0044462external encapsulating structure part1 (0.65%)0000100000
GO:0031301integral to organelle membrane1 (0.65%)0000001000
GO:0005779integral to peroxisomal membrane1 (0.65%)0000001000
GO:0031300intrinsic to organelle membrane1 (0.65%)0000001000
GO:0031231intrinsic to peroxisomal membrane1 (0.65%)0000001000
GO:0031988membrane-bounded vesicle1 (0.65%)0000100000
GO:0031903microbody membrane1 (0.65%)0000001000
GO:0044438microbody part1 (0.65%)0000001000
GO:0005759mitochondrial matrix1 (0.65%)0001000000
GO:0044429mitochondrial part1 (0.65%)0001000000
GO:0000152nuclear ubiquitin ligase complex1 (0.65%)0000001000
GO:0031984organelle subcompartment1 (0.65%)0000100000
GO:0030288outer membrane-bounded periplasmic space1 (0.65%)0000100000
GO:0042597periplasmic space1 (0.65%)0000100000
GO:0005778peroxisomal membrane1 (0.65%)0000001000
GO:0044439peroxisomal part1 (0.65%)0000001000
GO:0034357photosynthetic membrane1 (0.65%)0000100000
GO:0031976plastid thylakoid1 (0.65%)0000100000
GO:0055035plastid thylakoid membrane1 (0.65%)0000100000
GO:0010287plastoglobule1 (0.65%)0000010000
GO:0031977thylakoid lumen1 (0.65%)0000100000
GO:0042651thylakoid membrane1 (0.65%)0000100000
GO:0044436thylakoid part1 (0.65%)0000100000
GO:0031982vesicle1 (0.65%)0000100000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding107 (69.03%)312610251975218
GO:0005515protein binding58 (37.42%)393710852110
GO:1901363heterocyclic compound binding56 (36.13%)143419125215
GO:0097159organic cyclic compound binding56 (36.13%)143419125215
GO:0003824catalytic activity49 (31.61%)06401595109
GO:0043167ion binding42 (27.10%)03431473206
GO:0003676nucleic acid binding32 (20.65%)12231063113
GO:0003677DNA binding25 (16.13%)1202942113
GO:0043168anion binding24 (15.48%)02111052102
GO:1901265nucleoside phosphate binding23 (14.84%)02111052101
GO:0000166nucleotide binding23 (14.84%)02111052101
GO:0036094small molecule binding23 (14.84%)02111052101
GO:0097367carbohydrate derivative binding22 (14.19%)02111052001
GO:0001882nucleoside binding22 (14.19%)02111052001
GO:0001883purine nucleoside binding22 (14.19%)02111052001
GO:0017076purine nucleotide binding22 (14.19%)02111052001
GO:0032550purine ribonucleoside binding22 (14.19%)02111052001
GO:0035639purine ribonucleoside triphosphate binding22 (14.19%)02111052001
GO:0032555purine ribonucleotide binding22 (14.19%)02111052001
GO:0032549ribonucleoside binding22 (14.19%)02111052001
GO:0032553ribonucleotide binding22 (14.19%)02111052001
GO:0005524ATP binding21 (13.55%)02111042001
GO:0030554adenyl nucleotide binding21 (13.55%)02111042001
GO:0032559adenyl ribonucleotide binding21 (13.55%)02111042001
GO:0043169cation binding21 (13.55%)0133621104
GO:0016787hydrolase activity21 (13.55%)0430632003
GO:0046872metal ion binding21 (13.55%)0133621104
GO:0016740transferase activity18 (11.61%)0100843002
GO:0001071nucleic acid binding transcription factor activity14 (9.03%)1102322102
GO:0003700sequence-specific DNA binding transcription factor activity14 (9.03%)1102322102
GO:0046914transition metal ion binding14 (9.03%)0121511003
GO:0016773phosphotransferase activity, alcohol group as acceptor13 (8.39%)0000732001
GO:0046983protein dimerization activity13 (8.39%)2102311102
GO:0016772transferase activity, transferring phosphorus-containing groups13 (8.39%)0000732001
GO:0016301kinase activity11 (7.10%)0000731000
GO:0004672protein kinase activity11 (7.10%)0000731000
GO:0008270zinc ion binding11 (7.10%)0021501002
GO:0042802identical protein binding10 (6.45%)1101111112
GO:0016817hydrolase activity, acting on acid anhydrides9 (5.81%)0110321001
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides9 (5.81%)0110321001
GO:0017111nucleoside-triphosphatase activity9 (5.81%)0110321001
GO:0042803protein homodimerization activity9 (5.81%)1101111102
GO:0004674protein serine/threonine kinase activity9 (5.81%)0000531000
GO:0016462pyrophosphatase activity9 (5.81%)0110321001
GO:0043565sequence-specific DNA binding8 (5.16%)0001301003
GO:0003682chromatin binding6 (3.87%)0000140001
GO:0008092cytoskeletal protein binding5 (3.23%)0110011001
GO:0008017microtubule binding5 (3.23%)0110011001
GO:0003777microtubule motor activity5 (3.23%)0110011001
GO:0003774motor activity5 (3.23%)0110011001
GO:0016491oxidoreductase activity5 (3.23%)0100110101
GO:0008233peptidase activity5 (3.23%)0020210000
GO:0070011peptidase activity, acting on L-amino acid peptides5 (3.23%)0020210000
GO:0032403protein complex binding5 (3.23%)0110011001
GO:0015631tubulin binding5 (3.23%)0110011001
GO:0016887ATPase activity4 (2.58%)0000310000
GO:0004175endopeptidase activity4 (2.58%)0020200000
GO:0016798hydrolase activity, acting on glycosyl bonds4 (2.58%)0100001002
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds3 (1.94%)0000001002
GO:0004872receptor activity3 (1.94%)0100100001
GO:0005215transporter activity3 (1.94%)0000200001
GO:0003935GTP cyclohydrolase II activity2 (1.29%)0000200000
GO:0003933GTP cyclohydrolase activity2 (1.29%)0000200000
GO:0003723RNA binding2 (1.29%)0000020000
GO:0004561alpha-N-acetylglucosaminidase activity2 (1.29%)0000001001
GO:0004190aspartic-type endopeptidase activity2 (1.29%)0020000000
GO:0070001aspartic-type peptidase activity2 (1.29%)0020000000
GO:0010011auxin binding2 (1.29%)0100000001
GO:0030246carbohydrate binding2 (1.29%)0100010000
GO:0005507copper ion binding2 (1.29%)0100010000
GO:0019238cyclohydrolase activity2 (1.29%)0000200000
GO:0008144drug binding2 (1.29%)0000001001
GO:0020037heme binding2 (1.29%)0000010001
GO:0015929hexosaminidase activity2 (1.29%)0000001001
GO:0042393histone binding2 (1.29%)0000200000
GO:0042562hormone binding2 (1.29%)0100000001
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2 (1.29%)0000200000
GO:0016814hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines2 (1.29%)0000200000
GO:0016788hydrolase activity, acting on ester bonds2 (1.29%)0100100000
GO:0015075ion transmembrane transporter activity2 (1.29%)0000100001
GO:0016874ligase activity2 (1.29%)0010000001
GO:0008289lipid binding2 (1.29%)0000000002
GO:0004222metalloendopeptidase activity2 (1.29%)0000200000
GO:0008237metallopeptidase activity2 (1.29%)0000200000
GO:0035064methylated histone residue binding2 (1.29%)0000200000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2 (1.29%)0000000101
GO:0046982protein heterodimerization activity2 (1.29%)0000011000
GO:0022891substrate-specific transmembrane transporter activity2 (1.29%)0000100001
GO:0022892substrate-specific transporter activity2 (1.29%)0000100001
GO:0046906tetrapyrrole binding2 (1.29%)0000010001
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups2 (1.29%)0100000001
GO:0022857transmembrane transporter activity2 (1.29%)0000100001
GO:0009824AMP dimethylallyltransferase activity1 (0.65%)0100000000
GO:0008026ATP-dependent helicase activity1 (0.65%)0000100000
GO:0042623ATPase activity, coupled1 (0.65%)0000100000
GO:0005525GTP binding1 (0.65%)0000010000
GO:0003924GTPase activity1 (0.65%)0000010000
GO:0004499N,N-dimethylaniline monooxygenase activity1 (0.65%)0000000100
GO:0050661NADP binding1 (0.65%)0000000100
GO:0035251UDP-glucosyltransferase activity1 (0.65%)0000100000
GO:0008194UDP-glycosyltransferase activity1 (0.65%)0000100000
GO:0016881acid-amino acid ligase activity1 (0.65%)0000000001
GO:0022804active transmembrane transporter activity1 (0.65%)0000000001
GO:0003825alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1 (0.65%)0000100000
GO:0004812aminoacyl-tRNA ligase activity1 (0.65%)0010000000
GO:0008509anion transmembrane transporter activity1 (0.65%)0000000001
GO:0015301anion:anion antiporter activity1 (0.65%)0000000001
GO:0016209antioxidant activity1 (0.65%)0000010000
GO:0015297antiporter activity1 (0.65%)0000000001
GO:0005509calcium ion binding1 (0.65%)0010000000
GO:0019203carbohydrate phosphatase activity1 (0.65%)0000100000
GO:0015267channel activity1 (0.65%)0000100000
GO:0031490chromatin DNA binding1 (0.65%)0000100000
GO:0050662coenzyme binding1 (0.65%)0000000100
GO:0048037cofactor binding1 (0.65%)0000000100
GO:0008234cysteine-type peptidase activity1 (0.65%)0000010000
GO:0032451demethylase activity1 (0.65%)0000100000
GO:0004161dimethylallyltranstransferase activity1 (0.65%)0000000001
GO:0009055electron carrier activity1 (0.65%)0000010000
GO:0030234enzyme regulator activity1 (0.65%)0100000000
GO:0005231excitatory extracellular ligand-gated ion channel activity1 (0.65%)0000100000
GO:0005230extracellular ligand-gated ion channel activity1 (0.65%)0000100000
GO:0005234extracellular-glutamate-gated ion channel activity1 (0.65%)0000100000
GO:0004311farnesyltranstransferase activity1 (0.65%)0000000001
GO:0050660flavin adenine dinucleotide binding1 (0.65%)0000000100
GO:0022836gated channel activity1 (0.65%)0000100000
GO:0004337geranyltranstransferase activity1 (0.65%)0000000001
GO:0046527glucosyltransferase activity1 (0.65%)0000100000
GO:0008066glutamate receptor activity1 (0.65%)0000100000
GO:0019001guanyl nucleotide binding1 (0.65%)0000010000
GO:0032561guanyl ribonucleotide binding1 (0.65%)0000010000
GO:0004386helicase activity1 (0.65%)0000100000
GO:0032452histone demethylase activity1 (0.65%)0000100000
GO:0032454histone demethylase activity (H3-K9 specific)1 (0.65%)0000100000
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds1 (0.65%)0100000000
GO:0005452inorganic anion exchanger activity1 (0.65%)0000000001
GO:0005216ion channel activity1 (0.65%)0000100000
GO:0022839ion gated channel activity1 (0.65%)0000100000
GO:0004970ionotropic glutamate receptor activity1 (0.65%)0000100000
GO:0005506iron ion binding1 (0.65%)0000000001
GO:0022834ligand-gated channel activity1 (0.65%)0000100000
GO:0015276ligand-gated ion channel activity1 (0.65%)0000100000
GO:0016876ligase activity, forming aminoacyl-tRNA and related compounds1 (0.65%)0010000000
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (0.65%)0000000001
GO:0016875ligase activity, forming carbon-oxygen bonds1 (0.65%)0010000000
GO:0008168methyltransferase activity1 (0.65%)0000010000
GO:0060089molecular transducer activity1 (0.65%)0000100000
GO:0004497monooxygenase activity1 (0.65%)0000000100
GO:0016614oxidoreductase activity, acting on CH-OH group of donors1 (0.65%)0000100000
GO:0016709oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1 (0.65%)0000000100
GO:0016684oxidoreductase activity, acting on peroxide as acceptor1 (0.65%)0000010000
GO:0016645oxidoreductase activity, acting on the CH-NH group of donors1 (0.65%)0100000000
GO:0016647oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor1 (0.65%)0100000000
GO:0022803passive transmembrane transporter activity1 (0.65%)0000100000
GO:0004601peroxidase activity1 (0.65%)0000010000
GO:0016791phosphatase activity1 (0.65%)0000100000
GO:0005543phospholipid binding1 (0.65%)0000000001
GO:0042578phosphoric ester hydrolase activity1 (0.65%)0000100000
GO:0046592polyamine oxidase activity1 (0.65%)0100000000
GO:0004659prenyltransferase activity1 (0.65%)0000000001
GO:0070035purine NTP-dependent helicase activity1 (0.65%)0000100000
GO:0015291secondary active transmembrane transporter activity1 (0.65%)0000000001
GO:0004871signal transducer activity1 (0.65%)0000100000
GO:0038023signaling receptor activity1 (0.65%)0000100000
GO:0019787small conjugating protein ligase activity1 (0.65%)0000000001
GO:0043566structure-specific DNA binding1 (0.65%)0000100000
GO:0022838substrate-specific channel activity1 (0.65%)0000100000
GO:0016746transferase activity, transferring acyl groups1 (0.65%)0000001000
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (0.65%)0000001000
GO:0016757transferase activity, transferring glycosyl groups1 (0.65%)0000100000
GO:0016758transferase activity, transferring hexosyl groups1 (0.65%)0000100000
GO:0016741transferase activity, transferring one-carbon groups1 (0.65%)0000010000
GO:0008135translation factor activity, nucleic acid binding1 (0.65%)0000010000
GO:0003747translation release factor activity1 (0.65%)0000010000
GO:0016149translation release factor activity, codon specific1 (0.65%)0000010000
GO:0008079translation termination factor activity1 (0.65%)0000010000
GO:0004888transmembrane signaling receptor activity1 (0.65%)0000100000
GO:0004805trehalose-phosphatase activity1 (0.65%)0000100000
GO:0004842ubiquitin-protein ligase activity1 (0.65%)0000000001
GO:0051082unfolded protein binding1 (0.65%)0001000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process74 (47.74%)3112520964212
GO:0008152metabolic process71 (45.81%)11135211053210
GO:0071704organic substance metabolic process65 (41.94%)110352084329
GO:0044237cellular metabolic process62 (40.00%)111151975328
GO:0044238primary metabolic process61 (39.35%)18252084229
GO:0044699single-organism process56 (36.13%)372410954210
GO:0043170macromolecule metabolic process54 (34.84%)16351974117
GO:0044260cellular macromolecule metabolic process50 (32.26%)16151864117
GO:0065007biological regulation45 (29.03%)37151263305
GO:0050789regulation of biological process43 (27.74%)35151263305
GO:0044763single-organism cellular process43 (27.74%)2612775427
GO:0009058biosynthetic process38 (24.52%)17031133316
GO:0044249cellular biosynthetic process38 (24.52%)17031133316
GO:0050794regulation of cellular process38 (24.52%)33041253305
GO:0006807nitrogen compound metabolic process36 (23.23%)18031033215
GO:1901576organic substance biosynthetic process36 (23.23%)15031133316
GO:0050896response to stimulus36 (23.23%)11059103313
GO:0034641cellular nitrogen compound metabolic process34 (21.94%)16031033215
GO:0048856anatomical structure development33 (21.29%)3312743325
GO:0006725cellular aromatic compound metabolic process33 (21.29%)15031033215
GO:0032502developmental process33 (21.29%)3312743325
GO:0046483heterocycle metabolic process33 (21.29%)15031033215
GO:0044767single-organism developmental process33 (21.29%)3312743325
GO:1901360organic cyclic compound metabolic process32 (20.65%)14031033215
GO:0007275multicellular organismal development31 (20.00%)3212743324
GO:0032501multicellular organismal process31 (20.00%)3212743324
GO:0006139nucleobase-containing compound metabolic process31 (20.00%)14031033115
GO:0044707single-multicellular organism process31 (20.00%)3212743324
GO:0034645cellular macromolecule biosynthetic process30 (19.35%)14031033105
GO:0009059macromolecule biosynthetic process30 (19.35%)14031033105
GO:0090304nucleic acid metabolic process30 (19.35%)14031023115
GO:0019222regulation of metabolic process29 (18.71%)14031123104
GO:0044271cellular nitrogen compound biosynthetic process28 (18.06%)13031023204
GO:0010467gene expression28 (18.06%)13031033104
GO:0031323regulation of cellular metabolic process28 (18.06%)13031123104
GO:0048731system development28 (18.06%)3212732314
GO:0016070RNA metabolic process27 (17.42%)13031023104
GO:0019438aromatic compound biosynthetic process27 (17.42%)12031023204
GO:0018130heterocycle biosynthetic process27 (17.42%)12031023204
GO:1901362organic cyclic compound biosynthetic process27 (17.42%)12031023204
GO:0009889regulation of biosynthetic process27 (17.42%)13031023104
GO:0031326regulation of cellular biosynthetic process27 (17.42%)13031023104
GO:2000112regulation of cellular macromolecule biosynthetic process27 (17.42%)13031023104
GO:0010556regulation of macromolecule biosynthetic process27 (17.42%)13031023104
GO:0060255regulation of macromolecule metabolic process27 (17.42%)13031023104
GO:0051171regulation of nitrogen compound metabolic process27 (17.42%)13031023104
GO:0019219regulation of nucleobase-containing compound metabolic process27 (17.42%)13031023104
GO:0080090regulation of primary metabolic process27 (17.42%)13031023104
GO:0032774RNA biosynthetic process26 (16.77%)12031023104
GO:0034654nucleobase-containing compound biosynthetic process26 (16.77%)12031023104
GO:0006351transcription, DNA-templated26 (16.77%)12031023104
GO:2001141regulation of RNA biosynthetic process25 (16.13%)12031023103
GO:0051252regulation of RNA metabolic process25 (16.13%)12031023103
GO:0010468regulation of gene expression25 (16.13%)12031023103
GO:0006355regulation of transcription, DNA-dependent25 (16.13%)12031023103
GO:0019538protein metabolic process23 (14.84%)01221051002
GO:0000003reproduction22 (14.19%)1101731323
GO:0009628response to abiotic stimulus22 (14.19%)1103641213
GO:0044710single-organism metabolic process22 (14.19%)0700421323
GO:0003006developmental process involved in reproduction21 (13.55%)1101731313
GO:0022414reproductive process21 (13.55%)1101731313
GO:0048608reproductive structure development21 (13.55%)1101731313
GO:0061458reproductive system development21 (13.55%)1101731313
GO:0044702single organism reproductive process21 (13.55%)1101731313
GO:0009791post-embryonic development20 (12.90%)1101731204
GO:0044267cellular protein metabolic process19 (12.26%)0102941002
GO:0042221response to chemical17 (10.97%)0103353200
GO:0048367shoot system development16 (10.32%)1201511104
GO:0010033response to organic substance15 (9.68%)0102343200
GO:0009314response to radiation15 (9.68%)1001521113
GO:0016043cellular component organization14 (9.03%)1100522111
GO:0071840cellular component organization or biogenesis14 (9.03%)1100522111
GO:0009908flower development14 (9.03%)1101511103
GO:0006796phosphate-containing compound metabolic process14 (9.03%)0100741001
GO:0006793phosphorus metabolic process14 (9.03%)0100741001
GO:0009416response to light stimulus14 (9.03%)1001521103
GO:0006464cellular protein modification process13 (8.39%)0000831001
GO:0043412macromolecule modification13 (8.39%)0000831001
GO:0048513organ development13 (8.39%)2012222002
GO:0036211protein modification process13 (8.39%)0000831001
GO:0050793regulation of developmental process13 (8.39%)1110412102
GO:0051716cellular response to stimulus12 (7.74%)1001212311
GO:2000026regulation of multicellular organismal development12 (7.74%)1110412101
GO:0051239regulation of multicellular organismal process12 (7.74%)1110412101
GO:0009719response to endogenous stimulus12 (7.74%)0102233100
GO:0009725response to hormone12 (7.74%)0102233100
GO:0016310phosphorylation11 (7.10%)0000731000
GO:0048518positive regulation of biological process11 (7.10%)2101220102
GO:0006468protein phosphorylation11 (7.10%)0000731000
GO:0006950response to stress11 (7.10%)0102330110
GO:0009653anatomical structure morphogenesis10 (6.45%)1210201003
GO:0048519negative regulation of biological process10 (6.45%)0001511101
GO:0009648photoperiodism10 (6.45%)1001410102
GO:0048831regulation of shoot system development10 (6.45%)1100411101
GO:0007154cell communication9 (5.81%)1001112201
GO:0048523negative regulation of cellular process9 (5.81%)0001501101
GO:0006996organelle organization9 (5.81%)1000512000
GO:0009909regulation of flower development9 (5.81%)1000411101
GO:0048580regulation of post-embryonic development9 (5.81%)1000411101
GO:2000241regulation of reproductive process9 (5.81%)1000411101
GO:0007165signal transduction9 (5.81%)1001112201
GO:0023052signaling9 (5.81%)1001112201
GO:0044700single organism signaling9 (5.81%)1001112201
GO:0048869cellular developmental process8 (5.16%)1100003003
GO:0010154fruit development8 (5.16%)0100220210
GO:0051179localization8 (5.16%)0112210001
GO:0055114oxidation-reduction process8 (5.16%)0200211101
GO:0048573photoperiodism, flowering8 (5.16%)1000410101
GO:0048364root development8 (5.16%)1010221001
GO:0022622root system development8 (5.16%)1010221001
GO:0044711single-organism biosynthetic process8 (5.16%)0200100212
GO:0009888tissue development8 (5.16%)1010022002
GO:0010228vegetative to reproductive phase transition of meristem8 (5.16%)1000410101
GO:0009056catabolic process7 (4.52%)0211110001
GO:0051234establishment of localization7 (4.52%)0102210001
GO:0040007growth7 (4.52%)0210201001
GO:1901564organonitrogen compound metabolic process7 (4.52%)0500010100
GO:0006508proteolysis7 (4.52%)0021210001
GO:0065008regulation of biological quality7 (4.52%)1300010101
GO:0009733response to auxin7 (4.52%)0001231000
GO:1901700response to oxygen-containing compound7 (4.52%)0101022100
GO:0006810transport7 (4.52%)0102210001
GO:0030154cell differentiation6 (3.87%)1000003002
GO:0044248cellular catabolic process6 (3.87%)0111110001
GO:0070887cellular response to chemical stimulus6 (3.87%)0001102200
GO:0071310cellular response to organic substance6 (3.87%)0001102200
GO:0048229gametophyte development6 (3.87%)0000311010
GO:0051704multi-organism process6 (3.87%)0101021100
GO:0031324negative regulation of cellular metabolic process6 (3.87%)0000500100
GO:0009892negative regulation of metabolic process6 (3.87%)0000500100
GO:1901575organic substance catabolic process6 (3.87%)0201110001
GO:0009639response to red or far red light6 (3.87%)1000111101
GO:0009266response to temperature stimulus6 (3.87%)0102300000
GO:0048511rhythmic process6 (3.87%)1001100102
GO:0048316seed development6 (3.87%)0100220100
GO:0016049cell growth5 (3.23%)0200200001
GO:0006928cellular component movement5 (3.23%)0110011001
GO:0007623circadian rhythm5 (3.23%)1001100101
GO:0007018microtubule-based movement5 (3.23%)0110011001
GO:0007017microtubule-based process5 (3.23%)0110011001
GO:0051253negative regulation of RNA metabolic process5 (3.23%)0000400100
GO:0009890negative regulation of biosynthetic process5 (3.23%)00004