Gene Ontology terms associated with a binding site

Binding site
Motif_512
Name
GLMHVCHORD
Description
GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter
#Associated genes
229
#Associated GO terms
1095
 
Biological Process
Molecular Function
Cellular Component






Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell78 (34.06%)17464121111247
GO:0044464cell part78 (34.06%)17464121111247
GO:0005622intracellular68 (29.69%)17354101010225
GO:0044424intracellular part67 (29.26%)17354101010224
GO:0043226organelle65 (28.38%)1735311810224
GO:0043229intracellular organelle64 (27.95%)1735310810224
GO:0043227membrane-bounded organelle63 (27.51%)173539810224
GO:0043231intracellular membrane-bounded organelle62 (27.07%)173538810224
GO:0005737cytoplasm51 (22.27%)11354975124
GO:0044444cytoplasmic part46 (20.09%)10342965124
GO:0016020membrane34 (14.85%)2150734237
GO:0005634nucleus25 (10.92%)7021355101
GO:0071944cell periphery18 (7.86%)1221312024
GO:0005886plasma membrane16 (6.99%)1120312024
GO:0044422organelle part13 (5.68%)2120313001
GO:0009536plastid13 (5.68%)6000112003
GO:0009507chloroplast12 (5.24%)6000112002
GO:0044446intracellular organelle part12 (5.24%)2120213001
GO:0044425membrane part12 (5.24%)1120320210
GO:0005783endoplasmic reticulum9 (3.93%)1311200001
GO:0016021integral to membrane9 (3.93%)1120220100
GO:0031224intrinsic to membrane9 (3.93%)1120220100
GO:0031090organelle membrane8 (3.49%)1120112000
GO:0005773vacuole8 (3.49%)2111101001
GO:0005829cytosol7 (3.06%)0010230001
GO:0032991macromolecular complex7 (3.06%)1000400110
GO:0030054cell junction6 (2.62%)1100300001
GO:0005911cell-cell junction6 (2.62%)1100300001
GO:0005739mitochondrion6 (2.62%)3000012000
GO:0009506plasmodesma6 (2.62%)1100300001
GO:0055044symplast6 (2.62%)1100300001
GO:0005794Golgi apparatus5 (2.18%)1010020001
GO:0012505endomembrane system5 (2.18%)0110100110
GO:0005576extracellular region5 (2.18%)1010030000
GO:0031975envelope4 (1.75%)0000012001
GO:0043232intracellular non-membrane-bounded organelle4 (1.75%)1000300000
GO:0043228non-membrane-bounded organelle4 (1.75%)1000300000
GO:0031967organelle envelope4 (1.75%)0000012001
GO:0030529ribonucleoprotein complex4 (1.75%)1000300000
GO:0005840ribosome4 (1.75%)1000300000
GO:0005618cell wall3 (1.31%)0101000001
GO:0044434chloroplast part3 (1.31%)0000101001
GO:0044432endoplasmic reticulum part3 (1.31%)1110000000
GO:0005768endosome3 (1.31%)0000100110
GO:0030312external encapsulating structure3 (1.31%)0101000001
GO:0031301integral to organelle membrane3 (1.31%)0110010000
GO:0031300intrinsic to organelle membrane3 (1.31%)0110010000
GO:0005770late endosome3 (1.31%)0000100110
GO:0031988membrane-bounded vesicle3 (1.31%)0010101000
GO:0005771multivesicular body3 (1.31%)0000100110
GO:0009505plant-type cell wall3 (1.31%)0101000001
GO:0044435plastid part3 (1.31%)0000101001
GO:0043234protein complex3 (1.31%)0000100110
GO:0030904retromer complex3 (1.31%)0000100110
GO:0031982vesicle3 (1.31%)0010101000
GO:0048046apoplast2 (0.87%)0010010000
GO:0009941chloroplast envelope2 (0.87%)0000001001
GO:0009570chloroplast stroma2 (0.87%)0000001001
GO:0009534chloroplast thylakoid2 (0.87%)0000100001
GO:0009535chloroplast thylakoid membrane2 (0.87%)0000100001
GO:0016023cytoplasmic membrane-bounded vesicle2 (0.87%)0010001000
GO:0031410cytoplasmic vesicle2 (0.87%)0010001000
GO:0005789endoplasmic reticulum membrane2 (0.87%)0110000000
GO:0030176integral to endoplasmic reticulum membrane2 (0.87%)0110000000
GO:0070013intracellular organelle lumen2 (0.87%)1000100000
GO:0031227intrinsic to endoplasmic reticulum membrane2 (0.87%)0110000000
GO:0015934large ribosomal subunit2 (0.87%)1000100000
GO:0031974membrane-enclosed lumen2 (0.87%)1000100000
GO:0042579microbody2 (0.87%)0010000010
GO:0005740mitochondrial envelope2 (0.87%)0000011000
GO:0031966mitochondrial membrane2 (0.87%)0000011000
GO:0005741mitochondrial outer membrane2 (0.87%)0000011000
GO:0044429mitochondrial part2 (0.87%)0000011000
GO:0042175nuclear outer membrane-endoplasmic reticulum membrane network2 (0.87%)0110000000
GO:0043233organelle lumen2 (0.87%)1000100000
GO:0031968organelle outer membrane2 (0.87%)0000011000
GO:0031984organelle subcompartment2 (0.87%)0000100001
GO:0019867outer membrane2 (0.87%)0000011000
GO:0005777peroxisome2 (0.87%)0010000010
GO:0034357photosynthetic membrane2 (0.87%)0000100001
GO:0009526plastid envelope2 (0.87%)0000001001
GO:0009532plastid stroma2 (0.87%)0000001001
GO:0031976plastid thylakoid2 (0.87%)0000100001
GO:0055035plastid thylakoid membrane2 (0.87%)0000100001
GO:0044391ribosomal subunit2 (0.87%)1000100000
GO:0009579thylakoid2 (0.87%)0000100001
GO:0042651thylakoid membrane2 (0.87%)0000100001
GO:0044436thylakoid part2 (0.87%)0000100001
GO:0005774vacuolar membrane2 (0.87%)1000001000
GO:0044437vacuolar part2 (0.87%)1000001000
GO:0012506vesicle membrane2 (0.87%)0010100000
GO:0044431Golgi apparatus part1 (0.44%)0010000000
GO:0000139Golgi membrane1 (0.44%)0010000000
GO:0042995cell projection1 (0.44%)0010000000
GO:0044463cell projection part1 (0.44%)0010000000
GO:0030659cytoplasmic vesicle membrane1 (0.44%)0010000000
GO:0044433cytoplasmic vesicle part1 (0.44%)0010000000
GO:0022625cytosolic large ribosomal subunit1 (0.44%)0000100000
GO:0044445cytosolic part1 (0.44%)0000100000
GO:0022626cytosolic ribosome1 (0.44%)0000100000
GO:0005788endoplasmic reticulum lumen1 (0.44%)1000000000
GO:0071782endoplasmic reticulum tubular network1 (0.44%)0100000000
GO:0030173integral to Golgi membrane1 (0.44%)0010000000
GO:0071458integral to cytosolic side of endoplasmic reticulum membrane1 (0.44%)0100000000
GO:0032592integral to mitochondrial membrane1 (0.44%)0000010000
GO:0031307integral to mitochondrial outer membrane1 (0.44%)0000010000
GO:0031228intrinsic to Golgi membrane1 (0.44%)0010000000
GO:0031306intrinsic to mitochondrial outer membrane1 (0.44%)0000010000
GO:0044455mitochondrial membrane part1 (0.44%)0000010000
GO:0031981nuclear lumen1 (0.44%)0000100000
GO:0044428nuclear part1 (0.44%)0000100000
GO:0005730nucleolus1 (0.44%)0000100000
GO:0035618root hair1 (0.44%)0010000000
GO:0035619root hair tip1 (0.44%)0010000000

Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding106 (46.29%)82851529164415
GO:1901363heterocyclic compound binding56 (24.45%)524291510315
GO:0097159organic cyclic compound binding56 (24.45%)524291510315
GO:0005515protein binding55 (24.02%)40538175229
GO:0003824catalytic activity47 (20.52%)31356665210
GO:0003676nucleic acid binding43 (18.78%)51317148202
GO:0003677DNA binding37 (16.16%)31306147102
GO:0001071nucleic acid binding transcription factor activity31 (13.54%)3041895100
GO:0003700sequence-specific DNA binding transcription factor activity31 (13.54%)3041895100
GO:0043167ion binding28 (12.23%)1112454127
GO:0016787hydrolase activity20 (8.73%)2012414015
GO:0043565sequence-specific DNA binding20 (8.73%)2020573100
GO:0016740transferase activity19 (8.30%)0121231414
GO:0036094small molecule binding18 (7.86%)0112414113
GO:1901265nucleoside phosphate binding16 (6.99%)0112313113
GO:0000166nucleotide binding16 (6.99%)0112313113
GO:0043168anion binding15 (6.55%)0111313113
GO:0097367carbohydrate derivative binding13 (5.68%)0111212113
GO:0043169cation binding13 (5.68%)1001141014
GO:0046872metal ion binding13 (5.68%)1001141014
GO:0001882nucleoside binding13 (5.68%)0111212113
GO:0001883purine nucleoside binding13 (5.68%)0111212113
GO:0017076purine nucleotide binding13 (5.68%)0111212113
GO:0032550purine ribonucleoside binding13 (5.68%)0111212113
GO:0035639purine ribonucleoside triphosphate binding13 (5.68%)0111212113
GO:0032555purine ribonucleotide binding13 (5.68%)0111212113
GO:0032549ribonucleoside binding13 (5.68%)0111212113
GO:0032553ribonucleotide binding13 (5.68%)0111212113
GO:0016772transferase activity, transferring phosphorus-containing groups13 (5.68%)0121111213
GO:0005524ATP binding12 (5.24%)0111211113
GO:0030554adenyl nucleotide binding12 (5.24%)0111211113
GO:0032559adenyl ribonucleotide binding12 (5.24%)0111211113
GO:0016301kinase activity12 (5.24%)0121111113
GO:0016773phosphotransferase activity, alcohol group as acceptor12 (5.24%)0121111113
GO:0046983protein dimerization activity11 (4.80%)2000252000
GO:0003682chromatin binding10 (4.37%)1100042002
GO:0046914transition metal ion binding10 (4.37%)0001131013
GO:0004672protein kinase activity9 (3.93%)0111110112
GO:0005215transporter activity9 (3.93%)0020411010
GO:0016491oxidoreductase activity8 (3.49%)1002011102
GO:0022892substrate-specific transporter activity8 (3.49%)0020311010
GO:0004674protein serine/threonine kinase activity7 (3.06%)0111100102
GO:0008270zinc ion binding7 (3.06%)0000130012
GO:0022891substrate-specific transmembrane transporter activity6 (2.62%)0020301000
GO:0022857transmembrane transporter activity6 (2.62%)0020301000
GO:0016788hydrolase activity, acting on ester bonds5 (2.18%)1000101002
GO:0016798hydrolase activity, acting on glycosyl bonds5 (2.18%)0012000011
GO:0060089molecular transducer activity5 (2.18%)0010020101
GO:0004871signal transducer activity5 (2.18%)0010020101
GO:0051213dioxygenase activity4 (1.75%)0002001001
GO:0016817hydrolase activity, acting on acid anhydrides4 (1.75%)0000201001
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides4 (1.75%)0000201001
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds4 (1.75%)0012000010
GO:0015075ion transmembrane transporter activity4 (1.75%)0010201000
GO:0003735structural constituent of ribosome4 (1.75%)1000300000
GO:0005198structural molecule activity4 (1.75%)1000300000
GO:0003723RNA binding3 (1.31%)0001001100
GO:0008509anion transmembrane transporter activity3 (1.31%)0010101000
GO:1901505carbohydrate derivative transporter activity3 (1.31%)0020100000
GO:0015036disulfide oxidoreductase activity3 (1.31%)1000010001
GO:0019899enzyme binding3 (1.31%)0010020000
GO:0004857enzyme inhibitor activity3 (1.31%)0001011000
GO:0030234enzyme regulator activity3 (1.31%)0001011000
GO:0005506iron ion binding3 (1.31%)0001001001
GO:0008289lipid binding3 (1.31%)0000021000
GO:0015932nucleobase-containing compound transmembrane transporter activity3 (1.31%)0020100000
GO:0017111nucleoside-triphosphatase activity3 (1.31%)0000101001
GO:0016667oxidoreductase activity, acting on a sulfur group of donors3 (1.31%)1000010001
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3 (1.31%)0002001000
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3 (1.31%)0002001000
GO:0008233peptidase activity3 (1.31%)0000002001
GO:0070011peptidase activity, acting on L-amino acid peptides3 (1.31%)0000002001
GO:0042578phosphoric ester hydrolase activity3 (1.31%)0000100002
GO:0004650polygalacturonase activity3 (1.31%)0011000010
GO:0015035protein disulfide oxidoreductase activity3 (1.31%)1000010001
GO:0016462pyrophosphatase activity3 (1.31%)0000101001
GO:0016757transferase activity, transferring glycosyl groups3 (1.31%)0000100101
GO:0016758transferase activity, transferring hexosyl groups3 (1.31%)0000100101
GO:0051020GTPase binding2 (0.87%)0010010000
GO:0017016Ras GTPase binding2 (0.87%)0010010000
GO:0005460UDP-glucose transmembrane transporter activity2 (0.87%)0010100000
GO:0035251UDP-glucosyltransferase activity2 (0.87%)0000000101
GO:0008194UDP-glycosyltransferase activity2 (0.87%)0000000101
GO:0016597amino acid binding2 (0.87%)0000101000
GO:0005516calmodulin binding2 (0.87%)1000000010
GO:0031406carboxylic acid binding2 (0.87%)0000101000
GO:0052689carboxylic ester hydrolase activity2 (0.87%)1000001000
GO:0015267channel activity2 (0.87%)0000101000
GO:0030332cyclin binding2 (0.87%)0001010000
GO:0004861cyclin-dependent protein serine/threonine kinase inhibitor activity2 (0.87%)0001010000
GO:0016538cyclin-dependent protein serine/threonine kinase regulator activity2 (0.87%)0001010000
GO:0046527glucosyltransferase activity2 (0.87%)0000000101
GO:0016853isomerase activity2 (0.87%)1000000001
GO:0019900kinase binding2 (0.87%)0010010000
GO:0019210kinase inhibitor activity2 (0.87%)0001010000
GO:0019207kinase regulator activity2 (0.87%)0001010000
GO:0016874ligase activity2 (0.87%)0000010001
GO:0008168methyltransferase activity2 (0.87%)0000020000
GO:0019205nucleobase-containing compound kinase activity2 (0.87%)0000001001
GO:0015215nucleotide transmembrane transporter activity2 (0.87%)0010100000
GO:0005338nucleotide-sugar transmembrane transporter activity2 (0.87%)0010100000
GO:0043177organic acid binding2 (0.87%)0000101000
GO:0008514organic anion transmembrane transporter activity2 (0.87%)0010100000
GO:0015605organophosphate ester transmembrane transporter activity2 (0.87%)0010100000
GO:0022803passive transmembrane transporter activity2 (0.87%)0000101000
GO:0016791phosphatase activity2 (0.87%)0000100001
GO:1901677phosphate transmembrane transporter activity2 (0.87%)0010100000
GO:0051219phosphoprotein binding2 (0.87%)0000001001
GO:0019904protein domain specific binding2 (0.87%)0000001001
GO:0043424protein histidine kinase binding2 (0.87%)0010010000
GO:0019901protein kinase binding2 (0.87%)0010010000
GO:0004860protein kinase inhibitor activity2 (0.87%)0001010000
GO:0019887protein kinase regulator activity2 (0.87%)0001010000
GO:0045309protein phosphorylated amino acid binding2 (0.87%)0000001001
GO:0030291protein serine/threonine kinase inhibitor activity2 (0.87%)0001010000
GO:0015165pyrimidine nucleotide-sugar transmembrane transporter activity2 (0.87%)0010100000
GO:0017171serine hydrolase activity2 (0.87%)0000001001
GO:0008236serine-type peptidase activity2 (0.87%)0000001001
GO:0031267small GTPase binding2 (0.87%)0010010000
GO:0022838substrate-specific channel activity2 (0.87%)0000101000
GO:0016741transferase activity, transferring one-carbon groups2 (0.87%)0000020000
GO:00044301-phosphatidylinositol 4-kinase activity1 (0.44%)0010000000
GO:00002851-phosphatidylinositol-3-phosphate 5-kinase activity1 (0.44%)0000000001
GO:00041132',3'-cyclic-nucleotide 3'-phosphodiesterase activity1 (0.44%)0000000001
GO:0003876AMP deaminase activity1 (0.44%)0000010000
GO:0016887ATPase activity1 (0.44%)0000000001
GO:0003678DNA helicase activity1 (0.44%)0000100000
GO:0034061DNA polymerase activity1 (0.44%)0000000100
GO:0019003GDP binding1 (0.44%)0000001000
GO:0005525GTP binding1 (0.44%)0000001000
GO:0003924GTPase activity1 (0.44%)0000001000
GO:0004707MAP kinase activity1 (0.44%)0010000000
GO:0050136NADH dehydrogenase (quinone) activity1 (0.44%)0000000100
GO:0008137NADH dehydrogenase (ubiquinone) activity1 (0.44%)0000000100
GO:0003954NADH dehydrogenase activity1 (0.44%)0000000100
GO:0003972RNA ligase (ATP) activity1 (0.44%)0000000001
GO:0008452RNA ligase activity1 (0.44%)0000000001
GO:0003964RNA-directed DNA polymerase activity1 (0.44%)0000000100
GO:0017137Rab GTPase binding1 (0.44%)0010000000
GO:0008536Ran GTPase binding1 (0.44%)0000010000
GO:0005459UDP-galactose transmembrane transporter activity1 (0.44%)0010000000
GO:0080002UDP-glucose:4-aminobenzoate acylglucosyltransferase activity1 (0.44%)0000000100
GO:0090440abscisic acid transporter activity1 (0.44%)0000000010
GO:0003993acid phosphatase activity1 (0.44%)0000000001
GO:0016881acid-amino acid ligase activity1 (0.44%)0000010000
GO:0047623adenosine-phosphate deaminase activity1 (0.44%)0000010000
GO:0046556alpha-N-arabinofuranosidase activity1 (0.44%)0001000000
GO:0033218amide binding1 (0.44%)0000100000
GO:0005253anion channel activity1 (0.44%)0000001000
GO:0004190aspartic-type endopeptidase activity1 (0.44%)0000001000
GO:0070001aspartic-type peptidase activity1 (0.44%)0000001000
GO:0005509calcium ion binding1 (0.44%)1000000000
GO:0004180carboxypeptidase activity1 (0.44%)0000000001
GO:0008324cation transmembrane transporter activity1 (0.44%)0000100000
GO:0016760cellulose synthase (UDP-forming) activity1 (0.44%)0000000001
GO:0016759cellulose synthase activity1 (0.44%)0000000001
GO:0005507copper ion binding1 (0.44%)0000000001
GO:0005375copper ion transmembrane transporter activity1 (0.44%)0000100000
GO:0004112cyclic-nucleotide phosphodiesterase activity1 (0.44%)0000000001
GO:0019239deaminase activity1 (0.44%)0000010000
GO:0019136deoxynucleoside kinase activity1 (0.44%)0000001000
GO:0009055electron carrier activity1 (0.44%)0000010000
GO:0004175endopeptidase activity1 (0.44%)0000001000
GO:0008238exopeptidase activity1 (0.44%)0000000001
GO:0008199ferric iron binding1 (0.44%)0000001000
GO:0022836gated channel activity1 (0.44%)0000001000
GO:0019001guanyl nucleotide binding1 (0.44%)0000001000
GO:0032561guanyl ribonucleotide binding1 (0.44%)0000001000
GO:0004386helicase activity1 (0.44%)0000100000
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1 (0.44%)0000010000
GO:0016814hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines1 (0.44%)0000010000
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds1 (0.44%)0000000001
GO:0022890inorganic cation transmembrane transporter activity1 (0.44%)0000100000
GO:0016860intramolecular oxidoreductase activity1 (0.44%)1000000000
GO:0016864intramolecular oxidoreductase activity, transposing S-S bonds1 (0.44%)1000000000
GO:0005216ion channel activity1 (0.44%)0000001000
GO:0022839ion gated channel activity1 (0.44%)0000001000
GO:0016879ligase activity, forming carbon-nitrogen bonds1 (0.44%)0000010000
GO:0016886ligase activity, forming phosphoric ester bonds1 (0.44%)0000000001
GO:0016165linoleate 13S-lipoxygenase activity1 (0.44%)0000000001
GO:1990136linoleate 9S-lipoxygenase activity1 (0.44%)0000000001
GO:0016298lipase activity1 (0.44%)1000000000
GO:0005319lipid transporter activity1 (0.44%)0000000010
GO:0004474malate synthase activity1 (0.44%)0000000100
GO:0046873metal ion transmembrane transporter activity1 (0.44%)0000100000
GO:0072341modified amino acid binding1 (0.44%)0000100000
GO:0019206nucleoside kinase activity1 (0.44%)0000001000
GO:0005337nucleoside transmembrane transporter activity1 (0.44%)0010000000
GO:0016779nucleotidyltransferase activity1 (0.44%)0000000100
GO:0016651oxidoreductase activity, acting on NAD(P)H1 (0.44%)0000000100
GO:0016655oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1 (0.44%)0000000100
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen1 (0.44%)0000000001
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1 (0.44%)0000000001
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors1 (0.44%)0000000001
GO:0030599pectinesterase activity1 (0.44%)0000001000
GO:0070300phosphatidic acid binding1 (0.44%)0000001000
GO:0052742phosphatidylinositol kinase activity1 (0.44%)0010000000
GO:0016307phosphatidylinositol phosphate kinase activity1 (0.44%)0000000001
GO:0004623phospholipase A2 activity1 (0.44%)1000000000
GO:0004620phospholipase activity1 (0.44%)1000000000
GO:0005543phospholipid binding1 (0.44%)0000001000
GO:0031177phosphopantetheine binding1 (0.44%)0000100000
GO:0008081phosphoric diester hydrolase activity1 (0.44%)0000000001
GO:0016166phytoene dehydrogenase activity1 (0.44%)0000000001
GO:0051731polynucleotide 5'-hydroxyl-kinase activity1 (0.44%)0000000001
GO:0003756protein disulfide isomerase activity1 (0.44%)1000000000
GO:0008565protein transporter activity1 (0.44%)0000010000
GO:0004872receptor activity1 (0.44%)0000000100
GO:0005057receptor signaling protein activity1 (0.44%)0010000000
GO:0004702receptor signaling protein serine/threonine kinase activity1 (0.44%)0010000000
GO:0004185serine-type carboxypeptidase activity1 (0.44%)0000000001
GO:0070008serine-type exopeptidase activity1 (0.44%)0000000001
GO:0038023signaling receptor activity1 (0.44%)0000000100
GO:0032182small conjugating protein binding1 (0.44%)0000010000
GO:0019787small conjugating protein ligase activity1 (0.44%)0000010000
GO:0016746transferase activity, transferring acyl groups1 (0.44%)0000000100
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer1 (0.44%)0000000100
GO:0046915transition metal ion transmembrane transporter activity1 (0.44%)0000100000
GO:0019199transmembrane receptor protein kinase activity1 (0.44%)0000000100
GO:0004675transmembrane receptor protein serine/threonine kinase activity1 (0.44%)0000000100
GO:0004888transmembrane signaling receptor activity1 (0.44%)0000000100
GO:0043130ubiquitin binding1 (0.44%)0000010000
GO:0004842ubiquitin-protein ligase activity1 (0.44%)0000010000
GO:0019842vitamin binding1 (0.44%)0000100000
GO:0008308voltage-gated anion channel activity1 (0.44%)0000001000
GO:0022832voltage-gated channel activity1 (0.44%)0000001000
GO:0005244voltage-gated ion channel activity1 (0.44%)0000001000
GO:0015250water channel activity1 (0.44%)0000100000
GO:0005372water transmembrane transporter activity1 (0.44%)0000100000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process90 (39.30%)73841718136410
GO:0008152metabolic process87 (37.99%)71771416166211
GO:0071704organic substance metabolic process76 (33.19%)71751314124211
GO:0044238primary metabolic process74 (32.31%)7175131412429
GO:0044237cellular metabolic process70 (30.57%)7163131411519
GO:0065007biological regulation63 (27.51%)507391711128
GO:0043170macromolecule metabolic process63 (27.51%)6153121311318
GO:0050789regulation of biological process61 (26.64%)507381710128
GO:0044699single-organism process61 (26.64%)52767155437
GO:0044260cellular macromolecule metabolic process60 (26.20%)615312139317
GO:0050794regulation of cellular process52 (22.71%)50737138126
GO:0009058biosynthetic process50 (21.83%)506111127206
GO:0044249cellular biosynthetic process50 (21.83%)506111127206
GO:1901576organic substance biosynthetic process49 (21.40%)506111127205
GO:0006725cellular aromatic compound metabolic process48 (20.96%)50518129206
GO:0046483heterocycle metabolic process48 (20.96%)50518129206
GO:0006807nitrogen compound metabolic process48 (20.96%)50518129206
GO:0034641cellular nitrogen compound metabolic process47 (20.52%)50518129205
GO:1901360organic cyclic compound metabolic process47 (20.52%)50518129205
GO:0006139nucleobase-containing compound metabolic process46 (20.09%)50418129205
GO:0010467gene expression45 (19.65%)504110118204
GO:0034645cellular macromolecule biosynthetic process44 (19.21%)504110117204
GO:0009059macromolecule biosynthetic process44 (19.21%)504110117204
GO:0090304nucleic acid metabolic process44 (19.21%)50418118205
GO:0044763single-organism cellular process43 (18.78%)5263664335
GO:0016070RNA metabolic process42 (18.34%)50417118204
GO:0019222regulation of metabolic process42 (18.34%)40527118104
GO:0019438aromatic compound biosynthetic process41 (17.90%)50517127103
GO:0044271cellular nitrogen compound biosynthetic process41 (17.90%)50517127103
GO:0018130heterocycle biosynthetic process41 (17.90%)50517127103
GO:1901362organic cyclic compound biosynthetic process41 (17.90%)50517127103
GO:0031323regulation of cellular metabolic process41 (17.90%)40527117104
GO:0060255regulation of macromolecule metabolic process41 (17.90%)40527117104
GO:0080090regulation of primary metabolic process41 (17.90%)40527117104
GO:0034654nucleobase-containing compound biosynthetic process40 (17.47%)50417127103
GO:0032774RNA biosynthetic process39 (17.03%)50417117103
GO:0006351transcription, DNA-templated39 (17.03%)50417117103
GO:0051171regulation of nitrogen compound metabolic process38 (16.59%)40417107104
GO:0019219regulation of nucleobase-containing compound metabolic process38 (16.59%)40417107104
GO:0050896response to stimulus38 (16.59%)4151397026
GO:2001141regulation of RNA biosynthetic process37 (16.16%)40417107103
GO:0051252regulation of RNA metabolic process37 (16.16%)40417107103
GO:0009889regulation of biosynthetic process37 (16.16%)40417107103
GO:0031326regulation of cellular biosynthetic process37 (16.16%)40417107103
GO:2000112regulation of cellular macromolecule biosynthetic process37 (16.16%)40417107103
GO:0010468regulation of gene expression37 (16.16%)40417107103
GO:0010556regulation of macromolecule biosynthetic process37 (16.16%)40417107103
GO:0006355regulation of transcription, DNA-dependent37 (16.16%)40417107103
GO:0042221response to chemical24 (10.48%)4131273012
GO:0032502developmental process22 (9.61%)2141152105
GO:0044767single-organism developmental process22 (9.61%)2141152105
GO:0032501multicellular organismal process21 (9.17%)1041162105
GO:0019538protein metabolic process21 (9.17%)3112423113
GO:0010033response to organic substance21 (9.17%)3131163012
GO:0044707single-multicellular organism process20 (8.73%)1041162104
GO:0051234establishment of localization19 (8.30%)1020562120
GO:0051179localization19 (8.30%)1020562120
GO:0044267cellular protein metabolic process18 (7.86%)3112421112
GO:0007275multicellular organismal development18 (7.86%)1031152104
GO:0009719response to endogenous stimulus18 (7.86%)2120163012
GO:0009725response to hormone18 (7.86%)2120163012
GO:0044710single-organism metabolic process18 (7.86%)3023211204
GO:0006810transport18 (7.86%)1020462120
GO:0048856anatomical structure development17 (7.42%)1031142104
GO:1901700response to oxygen-containing compound17 (7.42%)3121053002
GO:0048731system development16 (6.99%)1021142104
GO:0006796phosphate-containing compound metabolic process15 (6.55%)1122130212
GO:0006793phosphorus metabolic process15 (6.55%)1122130212
GO:0051716cellular response to stimulus14 (6.11%)2041121012
GO:0006950response to stress14 (6.11%)2031121004
GO:0016310phosphorylation13 (5.68%)0122120212
GO:0000003reproduction13 (5.68%)1020132004
GO:0009628response to abiotic stimulus13 (5.68%)1030042003
GO:0033993response to lipid13 (5.68%)1110053002
GO:0006464cellular protein modification process12 (5.24%)1112120112
GO:0043412macromolecule modification12 (5.24%)1112120112
GO:0048513organ development12 (5.24%)1021031103
GO:0036211protein modification process12 (5.24%)1112120112
GO:0022414reproductive process12 (5.24%)1020132003
GO:0009737response to abscisic acid12 (5.24%)1110052002
GO:0097305response to alcohol12 (5.24%)1110052002
GO:0044765single-organism transport12 (5.24%)1010252010
GO:0003006developmental process involved in reproduction11 (4.80%)1020122003
GO:0009791post-embryonic development11 (4.80%)1010132003
GO:0006468protein phosphorylation11 (4.80%)0112120112
GO:0044702single organism reproductive process11 (4.80%)1020132002
GO:0048519negative regulation of biological process10 (4.37%)2012021002
GO:0071702organic substance transport10 (4.37%)0010150120
GO:0048608reproductive structure development10 (4.37%)1010122003
GO:0061458reproductive system development10 (4.37%)1010122003
GO:0009314response to radiation10 (4.37%)1020031003
GO:0048367shoot system development10 (4.37%)1010112103
GO:0009653anatomical structure morphogenesis9 (3.93%)1011031101
GO:0007154cell communication9 (3.93%)1041011010
GO:0016043cellular component organization9 (3.93%)