PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_132
Name: PIATGAPB
Description: PI found in the Arabidopsis thaliana GAPB gene promoter; Located between -157 and -150; Mutations in the PI resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana

#Associated genes: 106
#Associated MapMan terms: 85

Show species without binding site experiments

Click table-header(s) to enable sorting

MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	24 (22.64%)	1	2	1	6	11	1	0	2
27.3	RNA.regulation of transcription	18 (16.98%)	0	1	1	4	9	1	0	2
27.4	RNA.RNA binding	6 (5.66%)	1	1	0	2	2	0	0	0
17	hormone metabolism	5 (4.72%)	1	1	0	0	1	1	0	1
26	misc	5 (4.72%)	1	0	0	0	1	1	0	2
29	protein	5 (4.72%)	1	1	0	0	1	1	0	1
29.4	protein.postranslational modification	5 (4.72%)	1	1	0	0	1	1	0	1
30	signalling	5 (4.72%)	1	1	0	0	0	0	1	2
33	development	5 (4.72%)	0	0	0	3	0	2	0	0
33.99	development.unspecified	5 (4.72%)	0	0	0	3	0	2	0	0
34	transport	5 (4.72%)	0	0	0	2	1	1	0	1
17.2	hormone metabolism.auxin	3 (2.83%)	0	1	0	0	1	0	0	1
20	stress	3 (2.83%)	1	0	0	1	0	0	0	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	3 (2.83%)	0	0	0	2	1	0	0	0
29.4.1	protein.postranslational modification.kinase	3 (2.83%)	1	1	0	0	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	3 (2.83%)	1	1	0	0	0	0	0	1
2	major CHO metabolism	2 (1.89%)	0	0	0	0	1	0	0	1
2.1	major CHO metabolism.synthesis	2 (1.89%)	0	0	0	0	1	0	0	1
2.1.2	major CHO metabolism.synthesis.starch	2 (1.89%)	0	0	0	0	1	0	0	1
2.1.2.1	major CHO metabolism.synthesis.starch.AGPase	2 (1.89%)	0	0	0	0	1	0	0	1
10	cell wall	2 (1.89%)	0	0	0	1	1	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	2 (1.89%)	0	1	0	0	1	0	0	0
20.2	stress.abiotic	2 (1.89%)	1	0	0	0	0	0	0	1
26.2	misc.UDP glucosyl and glucoronyl transferases	2 (1.89%)	0	0	0	0	0	1	0	1
26.3	misc.gluco-, galacto- and mannosidases	2 (1.89%)	1	0	0	0	0	0	0	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	2 (1.89%)	0	0	0	0	2	0	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	2 (1.89%)	0	0	0	1	1	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	2 (1.89%)	0	0	0	1	1	0	0	0
27.3.59	RNA.regulation of transcription.Methyl binding domain proteins	2 (1.89%)	0	0	0	0	2	0	0	0
30.3	signalling.calcium	2 (1.89%)	0	1	0	0	0	0	0	1
30.5	signalling.G-proteins	2 (1.89%)	0	0	0	0	0	0	1	1
31	cell	2 (1.89%)	0	0	0	1	0	1	0	0
34.7	transport.phosphate	2 (1.89%)	0	0	0	1	1	0	0	0
1	PS	1 (0.94%)	0	0	0	0	0	1	0	0
1.3	PS.calvin cycle	1 (0.94%)	0	0	0	0	0	1	0	0
1.3.6	PS.calvin cycle.aldolase	1 (0.94%)	0	0	0	0	0	1	0	0
3	minor CHO metabolism	1 (0.94%)	0	0	0	0	1	0	0	0
10.6	cell wall.degradation	1 (0.94%)	0	0	0	0	1	0	0	0
10.6.2	cell wall.degradation.mannan-xylose-arabinose-fucose	1 (0.94%)	0	0	0	0	1	0	0	0
3.2	minor CHO metabolism.trehalose	1 (0.94%)	0	0	0	0	1	0	0	0
10.7	cell wall.modification	1 (0.94%)	0	0	0	1	0	0	0	0
12	N-metabolism	1 (0.94%)	0	0	0	0	1	0	0	0
12.2	N-metabolism.ammonia metabolism	1 (0.94%)	0	0	0	0	1	0	0	0
12.2.1	N-metabolism.ammonia metabolism.glutamate synthase	1 (0.94%)	0	0	0	0	1	0	0	0
13	amino acid metabolism	1 (0.94%)	0	0	0	1	0	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.94%)	0	0	0	1	0	0	0	0
13.1.3	amino acid metabolism.synthesis.aspartate family	1 (0.94%)	0	0	0	1	0	0	0	0
13.1.3.5	amino acid metabolism.synthesis.aspartate family.lysine	1 (0.94%)	0	0	0	1	0	0	0	0
13.1.3.5.2	amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase	1 (0.94%)	0	0	0	1	0	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.94%)	0	0	0	0	0	0	0	1
17.5	hormone metabolism.ethylene	1 (0.94%)	1	0	0	0	0	0	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	1 (0.94%)	1	0	0	0	0	0	0	0
17.5.1.2	hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase	1 (0.94%)	1	0	0	0	0	0	0	0
17.8	hormone metabolism.salicylic acid	1 (0.94%)	0	0	0	0	0	1	0	0
17.8.1	hormone metabolism.salicylic acid.synthesis-degradation	1 (0.94%)	0	0	0	0	0	1	0	0
20.1	stress.biotic	1 (0.94%)	0	0	0	1	0	0	0	0
20.2.1	stress.abiotic.heat	1 (0.94%)	0	0	0	0	0	0	0	1
20.2.99	stress.abiotic.unspecified	1 (0.94%)	1	0	0	0	0	0	0	0
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	1 (0.94%)	0	0	0	0	1	0	0	0
22	polyamine metabolism	1 (0.94%)	0	0	0	0	1	0	0	0
22.1	polyamine metabolism.synthesis	1 (0.94%)	0	0	0	0	1	0	0	0
22.1.2	polyamine metabolism.synthesis.SAM decarboxylase	1 (0.94%)	0	0	0	0	1	0	0	0
23	nucleotide metabolism	1 (0.94%)	0	0	0	0	0	1	0	0
23.3	nucleotide metabolism.salvage	1 (0.94%)	0	0	0	0	0	1	0	0
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.94%)	0	0	0	0	0	1	0	0
23.3.1.3	nucleotide metabolism.salvage.phosphoribosyltransferases.upp	1 (0.94%)	0	0	0	0	0	1	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	1 (0.94%)	0	0	0	0	0	0	0	1
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.94%)	1	0	0	0	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.94%)	0	0	0	0	1	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.94%)	0	0	0	0	1	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	1 (0.94%)	0	0	0	0	0	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	1 (0.94%)	0	0	1	0	0	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.94%)	0	0	0	0	0	0	0	1
27.3.34	RNA.regulation of transcription.Orphan family	1 (0.94%)	0	1	0	0	0	0	0	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	1 (0.94%)	0	0	0	0	1	0	0	0
27.3.99	RNA.regulation of transcription.unclassified	1 (0.94%)	0	0	0	0	0	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	1 (0.94%)	0	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.94%)	0	0	0	0	0	1	0	0
30.2	signalling.receptor kinases	1 (0.94%)	1	0	0	0	0	0	0	0
30.2.5	signalling.receptor kinases.leucine rich repeat V	1 (0.94%)	1	0	0	0	0	0	0	0
31.1	cell.organisation	1 (0.94%)	0	0	0	0	0	1	0	0
31.3	cell.cycle	1 (0.94%)	0	0	0	1	0	0	0	0
34.12	transport.metal	1 (0.94%)	0	0	0	0	0	0	0	1
34.16	transport.ABC transporters and multidrug resistance systems	1 (0.94%)	0	0	0	0	0	1	0	0
34.99	transport.misc	1 (0.94%)	0	0	0	1	0	0	0	0