PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_500
Name: WRKY43
Description: N/A

#Associated genes: 905
#Associated MapMan terms: 200

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	157 (17.35%)	14	11	14	47	31	11	15	14
27.3	RNA.regulation of transcription	147 (16.24%)	14	11	14	43	27	11	15	12
29	protein	110 (12.15%)	9	7	16	27	22	6	11	12
29.4	protein.postranslational modification	86 (9.50%)	6	5	16	19	16	6	7	11
30	signalling	64 (7.07%)	7	4	5	20	17	5	2	4
34	transport	50 (5.52%)	5	8	5	9	13	4	4	2
31	cell	49 (5.41%)	6	8	5	11	11	5	2	1
26	misc	47 (5.19%)	3	1	6	10	15	3	4	5
29.4.1	protein.postranslational modification.kinase	41 (4.53%)	2	1	12	8	4	4	3	7
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	40 (4.42%)	1	1	12	8	4	4	3	7
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	36 (3.98%)	3	3	5	11	4	3	3	4
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	30 (3.31%)	3	1	2	10	5	3	2	4
33	development	30 (3.31%)	4	0	3	8	6	3	4	2
20	stress	26 (2.87%)	4	3	5	3	7	1	2	1
27.3.99	RNA.regulation of transcription.unclassified	25 (2.76%)	1	2	4	7	6	1	2	2
30.2	signalling.receptor kinases	25 (2.76%)	2	3	4	8	5	2	0	1
33.99	development.unspecified	25 (2.76%)	4	0	3	5	6	2	4	1
31.4	cell.vesicle transport	23 (2.54%)	4	5	1	3	5	3	1	1
31.1	cell.organisation	22 (2.43%)	1	3	4	8	4	1	1	0
17	hormone metabolism	17 (1.88%)	2	1	1	5	4	1	2	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	16 (1.77%)	3	2	0	6	1	1	2	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	16 (1.77%)	2	2	2	5	1	1	3	0
20.2	stress.abiotic	14 (1.55%)	1	2	4	2	3	1	1	0
30.2.11	signalling.receptor kinases.leucine rich repeat XI	14 (1.55%)	1	1	1	5	4	1	0	1
17.5	hormone metabolism.ethylene	12 (1.33%)	1	0	1	4	3	0	2	1
20.1	stress.biotic	12 (1.33%)	3	1	1	1	4	0	1	1
26.10	misc.cytochrome P450	12 (1.33%)	0	0	1	4	5	0	2	0
29.5	protein.degradation	10 (1.10%)	1	0	0	5	2	0	2	0
30.2.17	signalling.receptor kinases.DUF 26	10 (1.10%)	1	2	3	3	1	0	0	0
34.4	transport.nitrate	10 (1.10%)	0	5	1	2	1	0	1	0
11	lipid metabolism	9 (0.99%)	2	3	2	0	0	1	0	1
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	9 (0.99%)	0	0	2	2	3	1	0	1
30.3	signalling.calcium	9 (0.99%)	1	0	0	3	3	0	1	1
26.2	misc.UDP glucosyl and glucoronyl transferases	8 (0.88%)	1	0	0	4	1	0	1	1
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	8 (0.88%)	1	0	2	0	3	0	0	2
29.3	protein.targeting	8 (0.88%)	2	0	0	2	3	0	0	1
30.5	signalling.G-proteins	8 (0.88%)	2	0	0	3	2	0	1	0
30.7	signalling.14-3-3 proteins	8 (0.88%)	2	1	0	2	2	1	0	0
34.16	transport.ABC transporters and multidrug resistance systems	8 (0.88%)	1	0	1	1	1	2	0	2
10	cell wall	7 (0.77%)	3	0	1	1	1	1	0	0
17.5.2	hormone metabolism.ethylene.signal transduction	7 (0.77%)	1	0	1	3	1	0	1	0
26.28	misc.GDSL-motif lipase	7 (0.77%)	0	0	0	1	3	1	1	1
27.3.29	RNA.regulation of transcription.TCP transcription factor family	7 (0.77%)	1	2	0	2	1	0	0	1
20.2.1	stress.abiotic.heat	6 (0.66%)	0	0	2	1	2	0	1	0
27.1	RNA.processing	6 (0.66%)	0	0	0	4	2	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	6 (0.66%)	1	0	1	1	1	0	2	0
1	PS	5 (0.55%)	0	0	1	0	0	1	2	1
11.9	lipid metabolism.lipid degradation	5 (0.55%)	1	1	2	0	0	1	0	0
17.5.1	hormone metabolism.ethylene.synthesis-degradation	5 (0.55%)	0	0	0	1	2	0	1	1
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	5 (0.55%)	1	1	1	0	0	1	0	1
27.3.64	RNA.regulation of transcription.PHOR1	5 (0.55%)	0	0	2	1	0	1	1	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	5 (0.55%)	0	1	2	0	1	0	1	0
30.11	signalling.light	5 (0.55%)	0	0	1	0	2	1	0	1
30.4	signalling.phosphinositides	5 (0.55%)	0	0	0	1	3	1	0	0
33.2	development.late embryogenesis abundant	5 (0.55%)	0	0	0	3	0	1	0	1
34.1	transport.p- and v-ATPases	5 (0.55%)	0	0	1	2	1	1	0	0
34.3	transport.amino acids	5 (0.55%)	0	1	0	0	4	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	4 (0.44%)	0	1	2	0	0	1	0	0
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase	4 (0.44%)	0	1	2	0	0	1	0	0
16	secondary metabolism	4 (0.44%)	0	0	0	1	2	1	0	0
17.2	hormone metabolism.auxin	4 (0.44%)	0	1	0	1	1	1	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	4 (0.44%)	0	1	0	1	1	1	0	0
20.2.3	stress.abiotic.drought/salt	4 (0.44%)	1	1	0	1	1	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	4 (0.44%)	1	0	0	1	1	0	1	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	4 (0.44%)	0	0	0	1	2	1	0	0
29.5.11	protein.degradation.ubiquitin	4 (0.44%)	1	0	0	1	1	0	1	0
30.4.3	signalling.phosphinositides.bis(5-nucleosyl)-tetraphosphatase	4 (0.44%)	0	0	0	1	2	1	0	0
34.22	transport.cyclic nucleotide or calcium regulated channels	4 (0.44%)	1	0	0	0	1	0	2	0
34.8	transport.metabolite transporters at the envelope membrane	4 (0.44%)	0	1	0	2	1	0	0	0
1.3	PS.calvin cycle	3 (0.33%)	0	0	1	0	0	1	0	1
1.3.8	PS.calvin cycle.transketolase	3 (0.33%)	0	0	1	0	0	1	0	1
3	minor CHO metabolism	3 (0.33%)	1	0	0	1	0	1	0	0
10.6	cell wall.degradation	3 (0.33%)	1	0	1	0	0	1	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	3 (0.33%)	1	2	0	0	0	0	0	0
20.1.3	stress.biotic.signalling	3 (0.33%)	1	0	0	1	1	0	0	0
20.1.3.1	stress.biotic.signalling.MLO-like	3 (0.33%)	1	0	0	1	1	0	0	0
21	redox	3 (0.33%)	0	0	0	2	0	0	0	1
21.2	redox.ascorbate and glutathione	3 (0.33%)	0	0	0	2	0	0	0	1
26.13	misc.acid and other phosphatases	3 (0.33%)	1	0	0	1	1	0	0	0
27.1.1	RNA.processing.splicing	3 (0.33%)	0	0	0	3	0	0	0	0
27.3.5	RNA.regulation of transcription.ARR	3 (0.33%)	0	0	0	2	0	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	3 (0.33%)	0	0	0	1	1	0	1	0
27.4	RNA.RNA binding	3 (0.33%)	0	0	0	0	2	0	0	1
29.2	protein.synthesis	3 (0.33%)	0	1	0	0	0	0	2	0
29.3.3	protein.targeting.chloroplast	3 (0.33%)	0	0	0	2	0	0	0	1
29.3.4	protein.targeting.secretory pathway	3 (0.33%)	1	0	0	0	2	0	0	0
29.3.4.99	protein.targeting.secretory pathway.unspecified	3 (0.33%)	1	0	0	0	2	0	0	0
3.5	minor CHO metabolism.others	3 (0.33%)	1	0	0	1	0	1	0	0
30.1	signalling.in sugar and nutrient physiology	3 (0.33%)	0	0	0	2	0	0	0	1
30.2.3	signalling.receptor kinases.leucine rich repeat III	3 (0.33%)	0	0	0	2	0	1	0	0
31.3	cell.cycle	3 (0.33%)	1	0	0	0	1	1	0	0
34.12	transport.metal	3 (0.33%)	2	0	0	0	0	0	1	0
1.1	PS.lightreaction	2 (0.22%)	0	0	0	0	0	0	2	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	2 (0.22%)	0	0	0	0	0	0	2	0
4	glycolysis	2 (0.22%)	0	1	0	1	0	0	0	0
10.2	cell wall.cellulose synthesis	2 (0.22%)	0	0	0	1	1	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	2 (0.22%)	1	0	0	0	0	1	0	0
11.8.4	lipid metabolism.exotics (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase	2 (0.22%)	1	1	0	0	0	0	0	0
16.8	secondary metabolism.flavonoids	2 (0.22%)	0	0	0	0	1	1	0	0
20.2.2	stress.abiotic.cold	2 (0.22%)	0	1	0	0	0	1	0	0
20.2.99	stress.abiotic.unspecified	2 (0.22%)	0	0	2	0	0	0	0	0
21.2.1	redox.ascorbate and glutathione.ascorbate	2 (0.22%)	0	0	0	2	0	0	0	0
23	nucleotide metabolism	2 (0.22%)	1	1	0	0	0	0	0	0
23.3	nucleotide metabolism.salvage	2 (0.22%)	1	1	0	0	0	0	0	0
26.19	misc.plastocyanin-like	2 (0.22%)	0	0	0	0	1	1	0	0
27.1.2	RNA.processing.RNA helicase	2 (0.22%)	0	0	0	0	2	0	0	0
27.3.12	RNA.regulation of transcription.C3H zinc finger family	2 (0.22%)	0	0	0	2	0	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	2 (0.22%)	0	0	0	0	2	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.22%)	1	0	0	0	1	0	0	0
28	DNA	2 (0.22%)	0	1	0	0	0	0	1	0
29.1	protein.aa activation	2 (0.22%)	0	1	0	0	1	0	0	0
29.2.4	protein.synthesis.elongation	2 (0.22%)	0	1	0	0	0	0	1	0
29.3.5	protein.targeting.peroxisomes	2 (0.22%)	1	0	0	0	1	0	0	0
29.5.1	protein.degradation.subtilases	2 (0.22%)	0	0	0	1	1	0	0	0
29.5.2	protein.degradation.autophagy	2 (0.22%)	0	0	0	1	0	0	1	0
4.2	glycolysis.plastid branch	2 (0.22%)	0	1	0	1	0	0	0	0
34.11	transport.NDP-sugars at the ER	2 (0.22%)	1	0	1	0	0	0	0	0
34.19	transport.Major Intrinsic Proteins	2 (0.22%)	0	0	0	0	2	0	0	0
34.2	transport.sugars	2 (0.22%)	0	0	0	1	1	0	0	0
34.7	transport.phosphate	2 (0.22%)	0	1	0	1	0	0	0	0
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (0.22%)	0	0	0	0	1	1	0	0
4.2.4	glycolysis.plastid branch.phosphofructokinase (PFK)	2 (0.22%)	0	1	0	1	0	0	0	0
7	OPP	1 (0.11%)	1	0	0	0	0	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.11%)	1	0	0	0	0	0	0	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	1 (0.11%)	0	0	0	0	1	0	0	0
10.2.2	cell wall.cellulose synthesis.COBRA	1 (0.11%)	0	0	0	1	0	0	0	0
10.3	cell wall.hemicellulose synthesis	1 (0.11%)	1	0	0	0	0	0	0	0
10.3.2	cell wall.hemicellulose synthesis.glucuronoxylan	1 (0.11%)	1	0	0	0	0	0	0	0
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases	1 (0.11%)	0	0	1	0	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.11%)	1	0	0	0	0	0	0	0
10.8.99	cell wall.pectin*esterases.misc	1 (0.11%)	1	0	0	0	0	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	1 (0.11%)	0	0	0	0	0	0	0	1
11.3.5	lipid metabolism.Phospholipid synthesis.diacylglycerol kinase	1 (0.11%)	0	0	0	0	0	0	0	1
11.8.8	lipid metabolism.exotics (steroids, squalene etc).squalene synthase	1 (0.11%)	0	1	0	0	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.11%)	1	0	0	0	0	0	0	0
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.11%)	1	0	0	0	0	0	0	0
13	amino acid metabolism	1 (0.11%)	0	0	0	0	1	0	0	0
13.1	amino acid metabolism.synthesis	1 (0.11%)	0	0	0	0	1	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.11%)	0	0	0	0	1	0	0	0
13.1.6.3	amino acid metabolism.synthesis.aromatic aa.phenylalanine	1 (0.11%)	0	0	0	0	1	0	0	0
16.1	secondary metabolism.isoprenoids	1 (0.11%)	0	0	0	0	1	0	0	0
16.10	secondary metabolism.simple phenols	1 (0.11%)	0	0	0	1	0	0	0	0
16.8.3	secondary metabolism.flavonoids.dihydroflavonols	1 (0.11%)	0	0	0	0	1	0	0	0
16.8.3.1	secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase	1 (0.11%)	0	0	0	0	1	0	0	0
16.8.5	secondary metabolism.flavonoids.isoflavones	1 (0.11%)	0	0	0	0	0	1	0	0
16.8.5.1	secondary metabolism.flavonoids.isoflavones.isoflavone reductase	1 (0.11%)	0	0	0	0	0	1	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.11%)	1	0	0	0	0	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	1 (0.11%)	1	0	0	0	0	0	0	0
17.3.2.99	hormone metabolism.brassinosteroid.signal transduction.other	1 (0.11%)	1	0	0	0	0	0	0	0
18	Co-factor and vitamine metabolism	1 (0.11%)	0	0	0	0	1	0	0	0
18.7	Co-factor and vitamine metabolism.iron-sulphur clusters	1 (0.11%)	0	0	0	0	1	0	0	0
23.2	nucleotide metabolism.degradation	1 (0.11%)	1	0	0	0	0	0	0	0
23.2.2	nucleotide metabolism.degradation.purine	1 (0.11%)	1	0	0	0	0	0	0	0
25	C1-metabolism	1 (0.11%)	0	0	0	0	1	0	0	0
25.7	C1-metabolism.GTP cyclohydrolase I	1 (0.11%)	0	0	0	0	1	0	0	0
26.11	misc.alcohol dehydrogenases	1 (0.11%)	0	0	0	0	0	1	0	0
26.12	misc.peroxidases	1 (0.11%)	0	0	0	0	0	0	0	1
26.21	misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	1 (0.11%)	0	0	0	0	1	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.11%)	0	0	1	0	0	0	0	0
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase	1 (0.11%)	0	0	1	0	0	0	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.11%)	0	1	0	0	0	0	0	0
26.4.1	misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase	1 (0.11%)	0	1	0	0	0	0	0	0
26.6	misc.O-methyl transferases	1 (0.11%)	0	0	1	0	0	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.11%)	0	0	1	0	0	0	0	0
27.1.19	RNA.processing.ribonucleases	1 (0.11%)	0	0	0	1	0	0	0	0
27.2	RNA.transcription	1 (0.11%)	0	0	0	0	0	0	0	1
27.3.1	RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family	1 (0.11%)	0	0	0	0	0	0	0	1
27.3.13	RNA.regulation of transcription.CCAAT box binding factor family, DR1	1 (0.11%)	0	0	0	0	0	0	0	1
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.11%)	0	0	0	1	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.11%)	0	0	0	0	0	0	1	0
27.3.4	RNA.regulation of transcription.ARF, Auxin Response Factor family	1 (0.11%)	0	0	0	1	0	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	1 (0.11%)	0	0	0	0	1	0	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.11%)	0	0	0	0	1	0	0	0
27.3.9	RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family	1 (0.11%)	0	1	0	0	0	0	0	0
28.1	DNA.synthesis/chromatin structure	1 (0.11%)	0	1	0	0	0	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	1 (0.11%)	0	1	0	0	0	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.11%)	0	1	0	0	0	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.11%)	0	1	0	0	0	0	0	0
28.99	DNA.unspecified	1 (0.11%)	0	0	0	0	0	0	1	0
29.1.1	protein.aa activation.tyrosine-tRNA ligase	1 (0.11%)	0	1	0	0	0	0	0	0
29.1.30	protein.aa activation.pseudouridylate synthase	1 (0.11%)	0	0	0	0	1	0	0	0
29.2.1.2.1.8	protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8	1 (0.11%)	0	0	0	0	1	0	0	0
29.2.1.2.2.57	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A	1 (0.11%)	0	0	0	0	0	1	0	0
29.2.3	protein.synthesis.initiation	1 (0.11%)	0	0	0	0	0	0	1	0
29.4.1.52	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II	1 (0.11%)	1	0	0	0	0	0	0	0
29.5.11.1	protein.degradation.ubiquitin.ubiquitin	1 (0.11%)	0	0	0	0	0	0	1	0
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.11%)	1	0	0	0	0	0	0	0
29.5.11.5	protein.degradation.ubiquitin.ubiquitin protease	1 (0.11%)	0	0	0	1	0	0	0	0
29.5.4	protein.degradation.aspartate protease	1 (0.11%)	0	0	0	1	0	0	0	0
30.4.5	signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase	1 (0.11%)	0	0	0	0	1	0	0	0
31.5.1	cell.cell death.plants	1 (0.11%)	0	0	0	0	1	0	0	0
34.19.2	transport.Major Intrinsic Proteins.TIP	1 (0.11%)	0	0	0	0	1	0	0	0
34.19.3	transport.Major Intrinsic Proteins.NIP	1 (0.11%)	0	0	0	0	1	0	0	0
7.2	OPP.non-reductive PP	1 (0.11%)	1	0	0	0	0	0	0	0
9.7	mitochondrial electron transport / ATP synthesis.cytochrome c oxidase	1 (0.11%)	1	0	0	0	0	0	0	0
29.7	protein.glycosylation	1 (0.11%)	0	0	0	1	0	0	0	0
30.99	signalling.unspecified	1 (0.11%)	0	0	0	1	0	0	0	0
31.5	cell.cell death	1 (0.11%)	0	0	0	0	1	0	0	0
34.13	transport.peptides and oligopeptides	1 (0.11%)	0	0	1	0	0	0	0	0
7.2.3	OPP.non-reductive PP.ribulose-phosphate 3-epimerase	1 (0.11%)	1	0	0	0	0	0	0	0