PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_458
Name: MGP;AT1G14580;AtIDD7;AtIDD5;AtIDD4;AtIDD12;JKD;AT5G66730
Description: N/A

#Associated genes: 593
#Associated MapMan terms: 200

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	99 (16.69%)	3	6	9	42	15	7	8	9
27.3	RNA.regulation of transcription	93 (15.68%)	3	5	9	40	14	7	7	8
29	protein	73 (12.31%)	9	7	5	18	12	6	6	10
29.4	protein.postranslational modification	42 (7.08%)	6	5	2	10	7	4	2	6
30	signalling	29 (4.89%)	1	1	5	5	6	3	1	7
31	cell	24 (4.05%)	4	3	0	4	6	0	4	3
34	transport	17 (2.87%)	1	0	3	4	3	1	0	5
33	development	13 (2.19%)	1	1	2	3	2	2	1	1
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	12 (2.02%)	0	1	2	3	3	0	1	2
29.2	protein.synthesis	12 (2.02%)	0	0	1	4	3	1	1	2
33.99	development.unspecified	12 (2.02%)	1	0	2	3	2	2	1	1
20	stress	11 (1.85%)	0	0	0	4	5	0	1	1
23	nucleotide metabolism	11 (1.85%)	0	1	0	3	3	1	1	2
27.3.99	RNA.regulation of transcription.unclassified	11 (1.85%)	1	3	0	4	0	1	2	0
28	DNA	11 (1.85%)	2	1	2	1	2	0	0	3
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	11 (1.85%)	2	0	1	4	3	0	0	1
30.5	signalling.G-proteins	11 (1.85%)	1	1	2	1	2	1	0	3
31.1	cell.organisation	11 (1.85%)	2	2	0	1	4	0	1	1
11	lipid metabolism	9 (1.52%)	0	2	1	2	3	0	0	1
26	misc	9 (1.52%)	1	1	0	0	4	1	1	1
29.3	protein.targeting	9 (1.52%)	2	0	1	3	0	0	2	1
29.5	protein.degradation	9 (1.52%)	1	2	0	1	2	1	1	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	8 (1.35%)	0	1	0	2	2	3	0	0
30.2	signalling.receptor kinases	8 (1.35%)	0	0	3	1	1	2	0	1
23.4	nucleotide metabolism.phosphotransfer and pyrophosphatases	7 (1.18%)	0	0	0	2	1	1	1	2
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	7 (1.18%)	0	0	1	2	3	1	0	0
17	hormone metabolism	6 (1.01%)	0	1	0	1	2	1	1	0
20.2	stress.abiotic	6 (1.01%)	0	0	0	1	3	0	1	1
27.1	RNA.processing	6 (1.01%)	0	1	0	2	1	0	1	1
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	6 (1.01%)	0	1	1	2	0	1	0	1
28.1	DNA.synthesis/chromatin structure	6 (1.01%)	1	1	1	1	1	0	0	1
29.2.3	protein.synthesis.initiation	6 (1.01%)	0	0	1	2	2	0	1	0
29.3.4	protein.targeting.secretory pathway	6 (1.01%)	1	0	1	2	0	0	1	1
29.4.1	protein.postranslational modification.kinase	6 (1.01%)	0	1	1	0	2	1	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	6 (1.01%)	0	1	1	0	2	1	0	1
10	cell wall	5 (0.84%)	0	2	0	2	1	0	0	0
11.1	lipid metabolism.FA synthesis and FA elongation	5 (0.84%)	0	1	0	1	3	0	0	0
17.2	hormone metabolism.auxin	5 (0.84%)	0	1	0	1	2	0	1	0
20.1	stress.biotic	5 (0.84%)	0	0	0	3	2	0	0	0
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	5 (0.84%)	0	0	0	5	0	0	0	0
28.2	DNA.repair	5 (0.84%)	1	0	1	0	1	0	0	2
31.3	cell.cycle	5 (0.84%)	2	0	0	1	0	0	1	1
1	PS	4 (0.67%)	0	0	0	0	1	0	1	2
4	glycolysis	4 (0.67%)	0	1	0	0	3	0	0	0
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	4 (0.67%)	0	0	0	1	2	0	1	0
20.2.1	stress.abiotic.heat	4 (0.67%)	0	0	0	1	2	0	0	1
23.4.3	nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase	4 (0.67%)	0	0	0	2	1	1	0	0
27.1.19	RNA.processing.ribonucleases	4 (0.67%)	0	0	0	2	1	0	1	0
27.3.23	RNA.regulation of transcription.HSF,Heat-shock transcription factor family	4 (0.67%)	0	0	3	0	0	0	0	1
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	4 (0.67%)	0	0	0	2	0	1	0	1
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	4 (0.67%)	0	0	1	0	1	1	1	0
27.3.35	RNA.regulation of transcription.bZIP transcription factor family	4 (0.67%)	0	0	1	1	1	0	1	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	4 (0.67%)	0	0	0	3	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	4 (0.67%)	0	0	0	3	0	0	1	0
29.2.99	protein.synthesis.misc	4 (0.67%)	0	0	0	1	1	1	0	1
29.5.11	protein.degradation.ubiquitin	4 (0.67%)	1	0	0	0	1	1	0	1
30.2.11	signalling.receptor kinases.leucine rich repeat XI	4 (0.67%)	0	0	0	1	1	2	0	0
30.3	signalling.calcium	4 (0.67%)	0	0	0	3	0	0	0	1
31.2	cell.division	4 (0.67%)	0	0	0	0	2	0	1	1
31.3.1	cell.cycle.peptidylprolyl isomerase	4 (0.67%)	1	0	0	1	0	0	1	1
34.2	transport.sugars	4 (0.67%)	0	0	1	1	1	0	0	1
20.1.7	stress.biotic.PR-proteins	3 (0.51%)	0	0	0	2	1	0	0	0
23.2	nucleotide metabolism.degradation	3 (0.51%)	0	1	0	1	1	0	0	0
26.10	misc.cytochrome P450	3 (0.51%)	1	0	0	0	1	0	1	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	3 (0.51%)	1	0	0	1	0	1	0	0
27.3.5	RNA.regulation of transcription.ARR	3 (0.51%)	1	0	0	1	1	0	0	0
29.3.1	protein.targeting.nucleus	3 (0.51%)	1	0	0	1	0	0	1	0
29.3.4.3	protein.targeting.secretory pathway.vacuole	3 (0.51%)	1	0	1	0	0	0	0	1
4.2	glycolysis.plastid branch	3 (0.51%)	0	1	0	0	2	0	0	0
30.11	signalling.light	3 (0.51%)	0	0	0	0	0	0	1	2
30.2.17	signalling.receptor kinases.DUF 26	3 (0.51%)	0	0	2	0	0	0	0	1
31.4	cell.vesicle transport	3 (0.51%)	0	1	0	2	0	0	0	0
4.2.14	glycolysis.plastid branch.pyruvate kinase (PK)	3 (0.51%)	0	1	0	0	2	0	0	0
1.1	PS.lightreaction	2 (0.34%)	0	0	0	0	1	0	1	0
1.3	PS.calvin cycle	2 (0.34%)	0	0	0	0	0	0	0	2
10.2	cell wall.cellulose synthesis	2 (0.34%)	0	0	0	2	0	0	0	0
10.2.1	cell wall.cellulose synthesis.cellulose synthase	2 (0.34%)	0	0	0	2	0	0	0	0
10.6	cell wall.degradation	2 (0.34%)	0	1	0	0	1	0	0	0
11.1.7	lipid metabolism.FA synthesis and FA elongation.ACP thioesterase	2 (0.34%)	0	0	0	0	2	0	0	0
11.9	lipid metabolism.lipid degradation	2 (0.34%)	0	0	1	0	0	0	0	1
13	amino acid metabolism	2 (0.34%)	0	0	0	2	0	0	0	0
13.1	amino acid metabolism.synthesis	2 (0.34%)	0	0	0	2	0	0	0	0
20.1.7.6	stress.biotic.PR-proteins.proteinase inhibitors	2 (0.34%)	0	0	0	2	0	0	0	0
20.1.7.6.1	stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor	2 (0.34%)	0	0	0	2	0	0	0	0
23.4.10	nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase	2 (0.34%)	0	0	0	0	0	0	1	1
27.3.21	RNA.regulation of transcription.GRAS transcription factor family	2 (0.34%)	0	0	0	0	1	0	0	1
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	2 (0.34%)	0	0	0	2	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.34%)	0	0	0	2	0	0	0	0
27.3.40	RNA.regulation of transcription.Aux/IAA family	2 (0.34%)	0	1	0	0	0	0	0	1
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	2 (0.34%)	0	0	0	1	0	0	1	0
27.3.64	RNA.regulation of transcription.PHOR1	2 (0.34%)	0	0	0	2	0	0	0	0
27.3.69	RNA.regulation of transcription.SET-domain transcriptional regulator family	2 (0.34%)	0	0	0	2	0	0	0	0
29.3.4.2	protein.targeting.secretory pathway.golgi	2 (0.34%)	0	0	0	1	0	0	1	0
29.5.3	protein.degradation.cysteine protease	2 (0.34%)	0	1	0	1	0	0	0	0
29.5.5	protein.degradation.serine protease	2 (0.34%)	0	0	0	0	1	0	1	0
30.10	signalling.phosphorelay	2 (0.34%)	0	0	0	0	2	0	0	0
34.16	transport.ABC transporters and multidrug resistance systems	2 (0.34%)	0	0	1	0	0	0	0	1
34.4	transport.nitrate	2 (0.34%)	0	0	0	2	0	0	0	0
34.8	transport.metabolite transporters at the envelope membrane	2 (0.34%)	0	0	0	0	0	0	0	2
34.9	transport.metabolite transporters at the mitochondrial membrane	2 (0.34%)	0	0	0	1	0	1	0	0
1.1.2	PS.lightreaction.photosystem I	1 (0.17%)	0	0	0	0	1	0	0	0
1.1.2.2	PS.lightreaction.photosystem I.PSI polypeptide subunits	1 (0.17%)	0	0	0	0	1	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.17%)	0	0	0	0	0	0	1	0
1.3.13	PS.calvin cycle.rubisco interacting	1 (0.17%)	0	0	0	0	0	0	0	1
1.3.6	PS.calvin cycle.aldolase	1 (0.17%)	0	0	0	0	0	0	0	1
2	major CHO metabolism	1 (0.17%)	0	0	0	0	0	0	1	0
3	minor CHO metabolism	1 (0.17%)	0	0	0	0	0	0	0	1
8	TCA / org transformation	1 (0.17%)	0	0	1	0	0	0	0	0
9	mitochondrial electron transport / ATP synthesis	1 (0.17%)	0	0	0	0	0	0	1	0
10.1	cell wall.precursor synthesis	1 (0.17%)	0	1	0	0	0	0	0	0
10.1.1	cell wall.precursor synthesis.NDP sugar pyrophosphorylase	1 (0.17%)	0	1	0	0	0	0	0	0
10.1.1.20	cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars	1 (0.17%)	0	1	0	0	0	0	0	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	1 (0.17%)	0	1	0	0	0	0	0	0
11.1.13	lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein	1 (0.17%)	0	1	0	0	0	0	0	0
11.1.3	lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase	1 (0.17%)	0	0	0	0	1	0	0	0
11.1.31	lipid metabolism.FA synthesis and FA elongation.pyruvate DH	1 (0.17%)	0	0	0	1	0	0	0	0
11.3	lipid metabolism.Phospholipid synthesis	1 (0.17%)	0	1	0	0	0	0	0	0
11.3.5	lipid metabolism.Phospholipid synthesis.diacylglycerol kinase	1 (0.17%)	0	1	0	0	0	0	0	0
11.6	lipid metabolism.lipid transfer proteins etc	1 (0.17%)	0	0	0	1	0	0	0	0
11.9.2	lipid metabolism.lipid degradation.lipases	1 (0.17%)	0	0	0	0	0	0	0	1
11.9.2.1	lipid metabolism.lipid degradation.lipases.triacylglycerol lipase	1 (0.17%)	0	0	0	0	0	0	0	1
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.17%)	0	0	1	0	0	0	0	0
11.9.3.1	lipid metabolism.lipid degradation.lysophospholipases.phospholipase D	1 (0.17%)	0	0	1	0	0	0	0	0
12	N-metabolism	1 (0.17%)	0	0	0	0	0	0	0	1
12.1	N-metabolism.nitrate metabolism	1 (0.17%)	0	0	0	0	0	0	0	1
12.1.1	N-metabolism.nitrate metabolism.NR	1 (0.17%)	0	0	0	0	0	0	0	1
13.1.1	amino acid metabolism.synthesis.central amino acid metabolism	1 (0.17%)	0	0	0	1	0	0	0	0
13.1.1.2	amino acid metabolism.synthesis.central amino acid metabolism.aspartate	1 (0.17%)	0	0	0	1	0	0	0	0
13.1.1.2.1	amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase	1 (0.17%)	0	0	0	1	0	0	0	0
13.1.5	amino acid metabolism.synthesis.serine-glycine-cysteine group	1 (0.17%)	0	0	0	1	0	0	0	0
13.1.5.3	amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine	1 (0.17%)	0	0	0	1	0	0	0	0
13.1.5.3.2	amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT	1 (0.17%)	0	0	0	1	0	0	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.17%)	0	1	0	0	0	0	0	0
2.2	major CHO metabolism.degradation	1 (0.17%)	0	0	0	0	0	0	1	0
17.3	hormone metabolism.brassinosteroid	1 (0.17%)	0	0	0	0	0	1	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	1 (0.17%)	0	0	0	0	0	1	0	0
17.3.2.2	hormone metabolism.brassinosteroid.signal transduction.BZR	1 (0.17%)	0	0	0	0	0	1	0	0
2.2.1	major CHO metabolism.degradation.sucrose	1 (0.17%)	0	0	0	0	0	0	1	0
2.2.1.3	major CHO metabolism.degradation.sucrose.invertases	1 (0.17%)	0	0	0	0	0	0	1	0
2.2.1.3.1	major CHO metabolism.degradation.sucrose.invertases.neutral	1 (0.17%)	0	0	0	0	0	0	1	0
20.1.3	stress.biotic.signalling	1 (0.17%)	0	0	0	1	0	0	0	0
20.1.3.1	stress.biotic.signalling.MLO-like	1 (0.17%)	0	0	0	1	0	0	0	0
20.2.4	stress.abiotic.touch/wounding	1 (0.17%)	0	0	0	0	0	0	1	0
20.2.99	stress.abiotic.unspecified	1 (0.17%)	0	0	0	0	1	0	0	0
21	redox	1 (0.17%)	0	0	0	0	1	0	0	0
21.1	redox.thioredoxin	1 (0.17%)	0	0	0	0	1	0	0	0
23.3	nucleotide metabolism.salvage	1 (0.17%)	0	0	0	0	1	0	0	0
23.3.1	nucleotide metabolism.salvage.phosphoribosyltransferases	1 (0.17%)	0	0	0	0	1	0	0	0
23.3.1.1	nucleotide metabolism.salvage.phosphoribosyltransferases.aprt	1 (0.17%)	0	0	0	0	1	0	0	0
23.4.99	nucleotide metabolism.phosphotransfer and pyrophosphatases.misc	1 (0.17%)	0	0	0	0	0	0	0	1
24	Biodegradation of Xenobiotics	1 (0.17%)	0	0	0	0	0	0	1	0
24.2	Biodegradation of Xenobiotics.lactoylglutathione lyase	1 (0.17%)	0	0	0	0	0	0	1	0
26.23	misc.rhodanese	1 (0.17%)	0	0	0	0	0	0	0	1
26.28	misc.GDSL-motif lipase	1 (0.17%)	0	0	0	0	1	0	0	0
26.3	misc.gluco-, galacto- and mannosidases	1 (0.17%)	0	0	0	0	0	1	0	0
26.4	misc.beta 1,3 glucan hydrolases	1 (0.17%)	0	0	0	0	1	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.17%)	0	1	0	0	0	0	0	0
26.8	misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases	1 (0.17%)	0	0	0	0	1	0	0	0
27.3.32	RNA.regulation of transcription.WRKY domain transcription factor family	1 (0.17%)	0	0	0	0	1	0	0	0
27.3.42	RNA.regulation of transcription.Bromodomain proteins	1 (0.17%)	0	0	0	0	0	0	0	1
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.17%)	0	0	0	1	0	0	0	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	1 (0.17%)	0	0	0	1	0	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.17%)	0	0	0	0	0	1	0	0
29.2.1.1.1.1.12	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S12	1 (0.17%)	0	0	0	0	1	0	0	0
29.2.1.1.1.2.19	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19	1 (0.17%)	0	0	0	0	1	0	0	0
29.2.1.1.3.2.1712	protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L7/L12	1 (0.17%)	0	0	0	0	1	0	0	0
29.2.1.2.2.18	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18	1 (0.17%)	0	0	0	0	1	0	0	0
29.2.1.2.2.22	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22	1 (0.17%)	0	0	0	1	0	0	0	0
29.2.1.2.2.3	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3	1 (0.17%)	0	0	0	1	0	0	0	0
29.2.1.2.2.527	protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A	1 (0.17%)	0	1	0	0	0	0	0	0
29.2.2	protein.synthesis.ribosome biogenesis	1 (0.17%)	0	0	0	1	0	0	0	0
29.2.2.1	protein.synthesis.ribosome biogenesis.export from nucleus	1 (0.17%)	0	0	0	1	0	0	0	0
29.2.2.3.99	protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc	1 (0.17%)	0	0	0	1	0	0	0	0
29.2.4	protein.synthesis.elongation	1 (0.17%)	0	0	0	0	0	0	0	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	1 (0.17%)	0	0	0	1	0	0	0	0
29.5.11.1	protein.degradation.ubiquitin.ubiquitin	1 (0.17%)	0	0	0	0	1	0	0	0
29.5.11.2	protein.degradation.ubiquitin.E1	1 (0.17%)	0	0	0	0	0	0	0	1
29.5.11.3	protein.degradation.ubiquitin.E2	1 (0.17%)	0	0	0	0	0	1	0	0
3.2	minor CHO metabolism.trehalose	1 (0.17%)	0	0	0	0	0	0	0	1
29.8	protein.assembly and cofactor ligation	1 (0.17%)	0	0	1	0	0	0	0	0
3.2.1	minor CHO metabolism.trehalose.TPS	1 (0.17%)	0	0	0	0	0	0	0	1
3.2.3	minor CHO metabolism.trehalose.potential TPS/TPP	1 (0.17%)	0	0	0	0	0	0	0	1
30.2.3	signalling.receptor kinases.leucine rich repeat III	1 (0.17%)	0	0	1	0	0	0	0	0
30.4	signalling.phosphinositides	1 (0.17%)	0	0	0	0	1	0	0	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.17%)	0	0	0	0	1	0	0	0
31.5	cell.cell death	1 (0.17%)	0	0	0	0	0	0	1	0
33.30	development.multitarget	1 (0.17%)	0	1	0	0	0	0	0	0
33.30.1	development.multitarget.target of rapamycin	1 (0.17%)	0	1	0	0	0	0	0	0
4.1	glycolysis.cytosolic branch	1 (0.17%)	0	0	0	0	1	0	0	0
8.1	TCA / org transformation.TCA	1 (0.17%)	0	0	1	0	0	0	0	0
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	1 (0.17%)	0	0	0	0	0	0	1	0
34.10	transport.nucleotides	1 (0.17%)	0	0	0	0	1	0	0	0
34.1	transport.p- and v-ATPases	1 (0.17%)	0	0	1	0	0	0	0	0
34.21	transport.calcium	1 (0.17%)	1	0	0	0	0	0	0	0
34.3	transport.amino acids	1 (0.17%)	0	0	0	0	0	0	0	1
34.98	transport.membrane system unknown	1 (0.17%)	0	0	0	0	1	0	0	0
4.1.13	glycolysis.cytosolic branch.enolase	1 (0.17%)	0	0	0	0	1	0	0	0
8.1.1	TCA / org transformation.TCA.pyruvate DH	1 (0.17%)	0	0	1	0	0	0	0	0
8.1.1.3	TCA / org transformation.TCA.pyruvate DH.E3	1 (0.17%)	0	0	1	0	0	0	0	0
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	1 (0.17%)	0	0	0	0	0	0	1	0