PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_350
Name: ARR14
Description: N/A

#Associated genes: 410
#Associated MapMan terms: 161

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ptr	ppe	sly	vvi
27	RNA	64 (15.61%)	3	5	6	24	10	4	4	8
27.3	RNA.regulation of transcription	56 (13.66%)	3	4	5	20	9	4	4	7
29	protein	46 (11.22%)	2	6	4	15	4	4	2	9
29.4	protein.postranslational modification	32 (7.80%)	2	5	2	11	3	3	1	5
26	misc	23 (5.61%)	2	7	1	8	1	3	0	1
28	DNA	23 (5.61%)	0	2	5	8	4	1	2	1
31	cell	23 (5.61%)	1	2	2	8	4	0	5	1
28.1	DNA.synthesis/chromatin structure	20 (4.88%)	0	1	5	6	4	1	2	1
30	signalling	19 (4.63%)	1	2	2	7	3	0	2	2
34	transport	15 (3.66%)	1	1	1	6	3	0	0	3
27.3.99	RNA.regulation of transcription.unclassified	13 (3.17%)	3	0	2	4	2	1	0	1
10	cell wall	10 (2.44%)	2	2	2	1	0	0	1	2
17	hormone metabolism	9 (2.20%)	1	2	0	2	2	1	0	1
31.1	cell.organisation	9 (2.20%)	0	1	0	3	1	0	4	0
17.2	hormone metabolism.auxin	8 (1.95%)	1	2	0	1	2	1	0	1
26.7	misc.oxidases - copper, flavone etc	8 (1.95%)	1	2	0	3	1	1	0	0
27.1	RNA.processing	8 (1.95%)	0	1	1	4	1	0	0	1
31.4	cell.vesicle transport	8 (1.95%)	1	1	1	2	1	0	1	1
33	development	8 (1.95%)	1	0	2	2	1	1	0	1
28.1.3	DNA.synthesis/chromatin structure.histone	7 (1.71%)	0	1	3	2	1	0	0	0
29.3	protein.targeting	7 (1.71%)	0	1	1	3	0	0	1	1
29.5	protein.degradation	7 (1.71%)	0	0	1	1	1	1	0	3
33.99	development.unspecified	7 (1.71%)	1	0	2	2	0	1	0	1
10.6	cell wall.degradation	6 (1.46%)	1	2	2	0	0	0	1	0
10.6.3	cell wall.degradation.pectate lyases and polygalacturonases	6 (1.46%)	1	2	2	0	0	0	1	0
27.1.2	RNA.processing.RNA helicase	6 (1.46%)	0	1	0	4	1	0	0	0
27.3.8	RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family	6 (1.46%)	0	3	0	3	0	0	0	0
30.3	signalling.calcium	6 (1.46%)	0	1	1	4	0	0	0	0
34.99	transport.misc	6 (1.46%)	1	0	0	2	2	0	0	1
17.2.3	hormone metabolism.auxin.induced-regulated-responsive-activated	5 (1.22%)	1	2	0	0	2	0	0	0
23	nucleotide metabolism	5 (1.22%)	0	3	0	1	1	0	0	0
26.2	misc.UDP glucosyl and glucoronyl transferases	5 (1.22%)	0	2	1	1	0	1	0	0
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	5 (1.22%)	0	0	0	2	0	1	1	1
29.3.4	protein.targeting.secretory pathway	5 (1.22%)	0	1	1	1	0	0	1	1
29.3.4.99	protein.targeting.secretory pathway.unspecified	5 (1.22%)	0	1	1	1	0	0	1	1
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	5 (1.22%)	0	0	0	2	2	0	0	1
30.5	signalling.G-proteins	5 (1.22%)	1	0	1	0	2	0	1	0
1	PS	4 (0.98%)	0	0	1	1	1	0	0	1
11	lipid metabolism	4 (0.98%)	1	0	0	0	2	0	0	1
13	amino acid metabolism	4 (0.98%)	0	0	0	2	2	0	0	0
20	stress	4 (0.98%)	0	0	0	0	1	0	0	3
26.5	misc.acyl transferases	4 (0.98%)	1	1	0	2	0	0	0	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	4 (0.98%)	0	0	1	1	1	0	1	0
27.3.6	RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family	4 (0.98%)	0	0	1	0	2	0	0	1
28.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase	4 (0.98%)	0	0	0	1	2	0	1	0
28.1.1.4	DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase	4 (0.98%)	0	0	0	1	2	0	1	0
29.5.11	protein.degradation.ubiquitin	4 (0.98%)	0	0	1	0	0	0	0	3
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	4 (0.98%)	0	1	0	2	0	0	0	1
30.11	signalling.light	4 (0.98%)	0	0	0	3	1	0	0	0
2	major CHO metabolism	3 (0.73%)	1	1	0	0	0	0	0	1
9	mitochondrial electron transport / ATP synthesis	3 (0.73%)	0	0	0	2	0	0	0	1
17.2.2	hormone metabolism.auxin.signal transduction	3 (0.73%)	0	0	0	1	0	1	0	1
2.2	major CHO metabolism.degradation	3 (0.73%)	1	1	0	0	0	0	0	1
29.5.11.3	protein.degradation.ubiquitin.E2	3 (0.73%)	0	0	1	0	0	0	0	2
9.1	mitochondrial electron transport / ATP synthesis.NADH-DH	3 (0.73%)	0	0	0	2	0	0	0	1
23.2	nucleotide metabolism.degradation	3 (0.73%)	0	2	0	1	0	0	0	0
28.2	DNA.repair	3 (0.73%)	0	1	0	2	0	0	0	0
31.2	cell.division	3 (0.73%)	0	0	0	3	0	0	0	0
31.3	cell.cycle	3 (0.73%)	0	0	1	0	2	0	0	0
34.15	transport.potassium	3 (0.73%)	0	0	0	2	0	0	0	1
34.8	transport.metabolite transporters at the envelope membrane	3 (0.73%)	0	0	0	2	0	0	0	1
9.1.2	mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear	3 (0.73%)	0	0	0	2	0	0	0	1
1.1	PS.lightreaction	2 (0.49%)	0	0	0	1	0	0	0	1
1.3	PS.calvin cycle	2 (0.49%)	0	0	1	0	1	0	0	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	2 (0.49%)	0	0	0	0	1	0	0	1
13.1	amino acid metabolism.synthesis	2 (0.49%)	0	0	0	0	2	0	0	0
13.2	amino acid metabolism.degradation	2 (0.49%)	0	0	0	2	0	0	0	0
13.2.5	amino acid metabolism.degradation.serine-glycine-cysteine group	2 (0.49%)	0	0	0	2	0	0	0	0
13.2.5.2	amino acid metabolism.degradation.serine-glycine-cysteine group.glycine	2 (0.49%)	0	0	0	2	0	0	0	0
15.2	metal handling.binding, chelation and storage	2 (0.49%)	0	0	0	1	1	0	0	0
2.2.1	major CHO metabolism.degradation.sucrose	2 (0.49%)	0	1	0	0	0	0	0	1
8	TCA / org transformation	2 (0.49%)	0	0	0	1	0	0	1	0
15	metal handling	2 (0.49%)	0	0	0	1	1	0	0	0
20.1	stress.biotic	2 (0.49%)	0	0	0	0	0	0	0	2
20.2	stress.abiotic	2 (0.49%)	0	0	0	0	1	0	0	1
21	redox	2 (0.49%)	0	1	0	1	0	0	0	0
21.1	redox.thioredoxin	2 (0.49%)	0	1	0	1	0	0	0	0
23.3	nucleotide metabolism.salvage	2 (0.49%)	0	1	0	0	1	0	0	0
23.3.3	nucleotide metabolism.salvage.NUDIX hydrolases	2 (0.49%)	0	1	0	0	1	0	0	0
26.13	misc.acid and other phosphatases	2 (0.49%)	0	1	0	0	0	0	0	1
26.3	misc.gluco-, galacto- and mannosidases	2 (0.49%)	0	0	0	2	0	0	0	0
26.3.2	misc.gluco-, galacto- and mannosidases.beta-galactosidase	2 (0.49%)	0	0	0	2	0	0	0	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	2 (0.49%)	0	0	1	0	1	0	0	0
27.3.22	RNA.regulation of transcription.HB,Homeobox transcription factor family	2 (0.49%)	0	0	0	2	0	0	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	2 (0.49%)	0	0	0	2	0	0	0	0
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family	2 (0.49%)	0	0	0	2	0	0	0	0
27.3.5	RNA.regulation of transcription.ARR	2 (0.49%)	0	0	0	2	0	0	0	0
27.3.63	RNA.regulation of transcription.PHD finger transcription factor	2 (0.49%)	0	0	0	1	0	0	0	1
29.3.1	protein.targeting.nucleus	2 (0.49%)	0	0	0	2	0	0	0	0
30.2	signalling.receptor kinases	2 (0.49%)	0	1	0	0	0	0	1	0
30.4	signalling.phosphinositides	2 (0.49%)	0	0	0	0	0	0	0	2
34.1	transport.p- and v-ATPases	2 (0.49%)	0	0	1	0	1	0	0	0
1.1.1	PS.lightreaction.photosystem II	1 (0.24%)	0	0	0	1	0	0	0	0
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (0.24%)	0	0	0	1	0	0	0	0
1.1.40	PS.lightreaction.cyclic electron flow-chlororespiration	1 (0.24%)	0	0	0	0	0	0	0	1
1.3.2	PS.calvin cycle.rubisco small subunit	1 (0.24%)	0	0	1	0	0	0	0	0
1.3.6	PS.calvin cycle.aldolase	1 (0.24%)	0	0	0	0	1	0	0	0
10.3	cell wall.hemicellulose synthesis	1 (0.24%)	0	0	0	1	0	0	0	0
10.4	cell wall.pectin synthesis	1 (0.24%)	0	0	0	0	0	0	0	1
10.4.3	cell wall.pectin synthesis.rhamnogalacturonan II	1 (0.24%)	0	0	0	0	0	0	0	1
10.4.3.6	cell wall.pectin synthesis.rhamnogalacturonan II.Xylose Transferase with Fucose Acceptor	1 (0.24%)	0	0	0	0	0	0	0	1
10.5	cell wall.cell wall proteins	1 (0.24%)	1	0	0	0	0	0	0	0
10.5.1	cell wall.cell wall proteins.AGPs	1 (0.24%)	1	0	0	0	0	0	0	0
10.5.1.2	cell wall.cell wall proteins.AGPs.AGP Fucosyltransferase	1 (0.24%)	1	0	0	0	0	0	0	0
10.8	cell wall.pectin*esterases	1 (0.24%)	0	0	0	0	0	0	0	1
10.8.1	cell wall.pectin*esterases.PME	1 (0.24%)	0	0	0	0	0	0	0	1
11.10	lipid metabolism.glycolipid synthesis	1 (0.24%)	1	0	0	0	0	0	0	0
11.10.1	lipid metabolism.glycolipid synthesis.MGDG synthase	1 (0.24%)	1	0	0	0	0	0	0	0
11.6	lipid metabolism.lipid transfer proteins etc	1 (0.24%)	0	0	0	0	1	0	0	0
11.8.1	lipid metabolism.exotics (steroids, squalene etc).sphingolipids	1 (0.24%)	0	0	0	0	1	0	0	0
11.8.3	lipid metabolism.exotics (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase	1 (0.24%)	0	0	0	0	0	0	0	1
13.1.3	amino acid metabolism.synthesis.aspartate family	1 (0.24%)	0	0	0	0	1	0	0	0
13.1.3.5	amino acid metabolism.synthesis.aspartate family.lysine	1 (0.24%)	0	0	0	0	1	0	0	0
13.1.6	amino acid metabolism.synthesis.aromatic aa	1 (0.24%)	0	0	0	0	1	0	0	0
13.1.6.1	amino acid metabolism.synthesis.aromatic aa.chorismate	1 (0.24%)	0	0	0	0	1	0	0	0
13.1.6.1.2	amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate synthase	1 (0.24%)	0	0	0	0	1	0	0	0
17.3	hormone metabolism.brassinosteroid	1 (0.24%)	0	0	0	1	0	0	0	0
17.3.2	hormone metabolism.brassinosteroid.signal transduction	1 (0.24%)	0	0	0	1	0	0	0	0
17.3.2.2	hormone metabolism.brassinosteroid.signal transduction.BZR	1 (0.24%)	0	0	0	1	0	0	0	0
2.2.1.3	major CHO metabolism.degradation.sucrose.invertases	1 (0.24%)	0	1	0	0	0	0	0	0
2.2.1.3.2	major CHO metabolism.degradation.sucrose.invertases.cell wall	1 (0.24%)	0	1	0	0	0	0	0	0
2.2.1.4	major CHO metabolism.degradation.sucrose.hexokinase	1 (0.24%)	0	0	0	0	0	0	0	1
2.2.2	major CHO metabolism.degradation.starch	1 (0.24%)	1	0	0	0	0	0	0	0
2.2.2.1	major CHO metabolism.degradation.starch.starch cleavage	1 (0.24%)	1	0	0	0	0	0	0	0
2.2.2.1.2	major CHO metabolism.degradation.starch.starch cleavage.beta amylase	1 (0.24%)	1	0	0	0	0	0	0	0
20.1.3	stress.biotic.signalling	1 (0.24%)	0	0	0	0	0	0	0	1
20.1.3.1	stress.biotic.signalling.MLO-like	1 (0.24%)	0	0	0	0	0	0	0	1
20.2.1	stress.abiotic.heat	1 (0.24%)	0	0	0	0	1	0	0	0
20.2.3	stress.abiotic.drought/salt	1 (0.24%)	0	0	0	0	0	0	0	1
26.10	misc.cytochrome P450	1 (0.24%)	0	0	0	0	0	1	0	0
26.24	misc.GCN5-related N-acetyltransferase	1 (0.24%)	0	1	0	0	0	0	0	0
27.1.1	RNA.processing.splicing	1 (0.24%)	0	0	1	0	0	0	0	0
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	1 (0.24%)	0	0	0	0	0	1	0	0
27.3.26	RNA.regulation of transcription.MYB-related transcription factor family	1 (0.24%)	0	0	0	1	0	0	0	0
27.3.30	RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family	1 (0.24%)	0	0	0	0	0	0	0	1
27.3.36	RNA.regulation of transcription.Argonaute	1 (0.24%)	0	0	0	0	0	0	0	1
27.3.37	RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family	1 (0.24%)	0	0	0	0	0	0	1	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	1 (0.24%)	0	0	0	0	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.24%)	0	1	0	0	0	0	0	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.24%)	0	0	0	1	0	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.24%)	0	0	0	1	0	0	0	0
29.2.1.1.1.1.2	protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S2	1 (0.24%)	0	0	0	0	0	0	1	0
29.2.1.1.2.1.3	protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3	1 (0.24%)	0	0	0	0	0	0	1	0
29.2.1.99.99	protein.synthesis.ribosomal protein.unknown.unknown	1 (0.24%)	0	0	1	0	0	0	0	0
29.4.1	protein.postranslational modification.kinase	1 (0.24%)	0	0	0	1	0	0	0	0
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (0.24%)	0	0	0	1	0	0	0	0
29.5.11.4.1	protein.degradation.ubiquitin.E3.HECT	1 (0.24%)	0	0	0	0	0	1	0	0
29.5.11.4.5	protein.degradation.ubiquitin.E3.BTB/POZ Cullin3	1 (0.24%)	1	0	0	0	0	0	0	0
29.5.5	protein.degradation.serine protease	1 (0.24%)	0	0	0	0	0	1	0	0
30.2.17	signalling.receptor kinases.DUF 26	1 (0.24%)	0	1	0	0	0	0	0	0
30.2.99	signalling.receptor kinases.misc	1 (0.24%)	0	0	0	0	0	0	1	0
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase	1 (0.24%)	0	0	0	0	0	0	0	1
30.4.4	signalling.phosphinositides.phosphoinositide phospholipase C	1 (0.24%)	0	0	0	0	0	0	0	1
31.3.1	cell.cycle.peptidylprolyl isomerase	1 (0.24%)	0	0	0	0	1	0	0	0
34.1.1	transport.p- and v-ATPases.H+-transporting two-sector ATPase	1 (0.24%)	0	0	1	0	0	0	0	0
8.1	TCA / org transformation.TCA	1 (0.24%)	0	0	0	1	0	0	0	0
33.1	development.storage proteins	1 (0.24%)	0	0	0	0	1	0	0	0
34.21	transport.calcium	1 (0.24%)	0	1	0	0	0	0	0	0
8.1.3	TCA / org transformation.TCA.aconitase	1 (0.24%)	0	0	0	1	0	0	0	0
8.2	TCA / org transformation.other organic acid transformations	1 (0.24%)	0	0	0	0	0	0	1	0
8.2.11	TCA / org transformation.other organic acid transformatons.atp-citrate lyase	1 (0.24%)	0	0	0	0	0	0	1	0