PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Matrix_341
Name: HMGA
Description: N/A

#Associated genes: 131
#Associated MapMan terms: 78

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MapMan	Description	#Associated genes	ath	bra	egr	gma	ppe	sly	vvi
27	RNA	23 (17.56%)	0	0	0	12	7	4	0
27.3	RNA.regulation of transcription	23 (17.56%)	0	0	0	12	7	4	0
28	DNA	16 (12.21%)	2	0	0	9	0	4	1
28.1	DNA.synthesis/chromatin structure	14 (10.69%)	1	0	0	8	0	4	1
33	development	11 (8.40%)	0	0	0	5	1	5	0
33.99	development.unspecified	10 (7.63%)	0	0	0	5	0	5	0
30	signalling	7 (5.34%)	1	1	0	4	0	1	0
26	misc	6 (4.58%)	0	3	0	2	0	1	0
31	cell	6 (4.58%)	0	0	0	2	2	1	1
34	transport	6 (4.58%)	0	0	1	1	1	1	2
29	protein	5 (3.82%)	0	0	0	4	1	0	0
23	nucleotide metabolism	4 (3.05%)	0	0	0	2	0	2	0
26.2	misc.UDP glucosyl and glucoronyl transferases	4 (3.05%)	0	2	0	2	0	0	0
27.3.44	RNA.regulation of transcription.Chromatin Remodeling Factors	4 (3.05%)	0	0	0	2	0	2	0
27.3.62	RNA.regulation of transcription.Nucleosome/chromatin assembly factor group	4 (3.05%)	0	0	0	3	1	0	0
16	secondary metabolism	3 (2.29%)	0	0	0	2	0	1	0
23.5	nucleotide metabolism.deoxynucleotide metabolism	3 (2.29%)	0	0	0	1	0	2	0
27.3.25	RNA.regulation of transcription.MYB domain transcription factor family	3 (2.29%)	0	0	0	2	1	0	0
29.5	protein.degradation	3 (2.29%)	0	0	0	3	0	0	0
30.5	signalling.G-proteins	3 (2.29%)	1	0	0	1	0	1	0
31.1	cell.organisation	3 (2.29%)	0	0	0	1	0	1	1
34.13	transport.peptides and oligopeptides	3 (2.29%)	0	0	1	0	0	0	2
11	lipid metabolism	2 (1.53%)	1	0	0	0	1	0	0
16.10	secondary metabolism.simple phenols	2 (1.53%)	0	0	0	2	0	0	0
17	hormone metabolism	2 (1.53%)	0	0	0	0	1	0	1
23.5.4	nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase	2 (1.53%)	0	0	0	1	0	1	0
27.3.18	RNA.regulation of transcription.E2F/DP transcription factor family	2 (1.53%)	0	0	0	2	0	0	0
28.1.3	DNA.synthesis/chromatin structure.histone	2 (1.53%)	0	0	0	1	0	1	0
28.2	DNA.repair	2 (1.53%)	1	0	0	1	0	0	0
29.4	protein.postranslational modification	2 (1.53%)	0	0	0	1	1	0	0
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	2 (1.53%)	0	0	0	0	1	1	0
29.5.2	protein.degradation.autophagy	2 (1.53%)	0	0	0	2	0	0	0
30.2	signalling.receptor kinases	2 (1.53%)	0	0	0	2	0	0	0
30.2.3	signalling.receptor kinases.leucine rich repeat III	2 (1.53%)	0	0	0	2	0	0	0
30.3	signalling.calcium	2 (1.53%)	0	1	0	1	0	0	0
31.2	cell.division	2 (1.53%)	0	0	0	1	1	0	0
4	glycolysis	1 (0.76%)	0	0	0	0	0	1	0
11.8	lipid metabolism.exotics(steroids, squalene etc)	1 (0.76%)	0	0	0	0	1	0	0
11.8.4	lipid metabolism.exotics (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase	1 (0.76%)	0	0	0	0	1	0	0
11.9	lipid metabolism.lipid degradation	1 (0.76%)	1	0	0	0	0	0	0
11.9.3	lipid metabolism.lipid degradation.lysophospholipases	1 (0.76%)	1	0	0	0	0	0	0
11.9.3.3	lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase	1 (0.76%)	1	0	0	0	0	0	0
16.1	secondary metabolism.isoprenoids	1 (0.76%)	0	0	0	0	0	1	0
16.1.5	secondary metabolism.isoprenoids.terpenoids	1 (0.76%)	0	0	0	0	0	1	0
17.2	hormone metabolism.auxin	1 (0.76%)	0	0	0	0	1	0	0
17.2.2	hormone metabolism.auxin.signal transduction	1 (0.76%)	0	0	0	0	1	0	0
17.4	hormone metabolism.cytokinin	1 (0.76%)	0	0	0	0	0	0	1
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (0.76%)	0	0	0	0	0	0	1
21	redox	1 (0.76%)	0	0	0	0	1	0	0
21.4	redox.glutaredoxins	1 (0.76%)	0	0	0	0	1	0	0
23.2	nucleotide metabolism.degradation	1 (0.76%)	0	0	0	1	0	0	0
23.5.5	nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase	1 (0.76%)	0	0	0	0	0	1	0
25	C1-metabolism	1 (0.76%)	0	0	0	0	1	0	0
25.1	C1-metabolism.glycine hydroxymethyltransferase	1 (0.76%)	0	0	0	0	1	0	0
26.28	misc.GDSL-motif lipase	1 (0.76%)	0	1	0	0	0	0	0
26.7	misc.oxidases - copper, flavone etc	1 (0.76%)	0	0	0	0	0	1	0
27.3.11	RNA.regulation of transcription.C2H2 zinc finger family	1 (0.76%)	0	0	0	0	0	1	0
27.3.20	RNA.regulation of transcription.G2-like transcription factor family, GARP	1 (0.76%)	0	0	0	1	0	0	0
27.3.24	RNA.regulation of transcription.MADS box transcription factor family	1 (0.76%)	0	0	0	0	1	0	0
27.3.29	RNA.regulation of transcription.TCP transcription factor family	1 (0.76%)	0	0	0	0	1	0	0
27.3.46	RNA.regulation of transcription.DNA methyltransferases	1 (0.76%)	0	0	0	0	1	0	0
27.3.52	RNA.regulation of transcription.Global transcription factor group	1 (0.76%)	0	0	0	1	0	0	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (0.76%)	0	0	0	1	0	0	0
27.3.67	RNA.regulation of transcription.putative transcription regulator	1 (0.76%)	0	0	0	0	1	0	0
27.3.7	RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family	1 (0.76%)	0	0	0	0	1	0	0
27.3.73	RNA.regulation of transcription.Zn-finger(CCHC)	1 (0.76%)	0	0	0	0	0	1	0
27.3.99	RNA.regulation of transcription.unclassified	1 (0.76%)	0	0	0	0	0	1	0
28.1.3.2	DNA.synthesis/chromatin structure.histone.core	1 (0.76%)	0	0	0	1	0	0	0
28.1.3.2.3	DNA.synthesis/chromatin structure.histone.core.H3	1 (0.76%)	0	0	0	1	0	0	0
29.5.11.4.3.2	protein.degradation.ubiquitin.E3.SCF.FBOX	1 (0.76%)	0	0	0	0	0	1	0
29.5.9	protein.degradation.AAA type	1 (0.76%)	0	0	0	1	0	0	0
4.3	glycolysis.unclear/dually targeted	1 (0.76%)	0	0	0	0	0	1	0
31.3	cell.cycle	1 (0.76%)	0	0	0	0	1	0	0
33.3	development.squamosa promoter binding like (SPL)	1 (0.76%)	0	0	0	0	1	0	0
34.1	transport.p- and v-ATPases	1 (0.76%)	0	0	0	0	1	0	0
34.12	transport.metal	1 (0.76%)	0	0	0	1	0	0	0
34.22	transport.cyclic nucleotide or calcium regulated channels	1 (0.76%)	0	0	0	0	0	1	0
4.3.6	glycolysis.unclear/dually targeted.fructose-2,6-bisphosphatase (Fru2,6BisPase)	1 (0.76%)	0	0	0	0	0	1	0