Gene Ontology terms associated with a binding site

Binding site
Matrix_199
Name
AT1G69170;SPL9;SPL15;SPL13A;SPL13B
Description
N/A
#Associated genes
360
#Associated GO terms
1350
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding214 (59.44%)17161385936269822
GO:0003824catalytic activity140 (38.89%)1212610271616121415
GO:0005515protein binding111 (30.83%)611553222105510
GO:1901363heterocyclic compound binding107 (29.72%)107852514175511
GO:0097159organic cyclic compound binding107 (29.72%)107852514175511
GO:0043167ion binding80 (22.22%)10443221010359
GO:0003676nucleic acid binding56 (15.56%)4352111010317
GO:1901265nucleoside phosphate binding53 (14.72%)64331366138
GO:0000166nucleotide binding53 (14.72%)64331366138
GO:0036094small molecule binding53 (14.72%)64331366138
GO:0016787hydrolase activity52 (14.44%)5544666646
GO:0043168anion binding46 (12.78%)62221365127
GO:0043169cation binding44 (12.22%)73221146333
GO:0046872metal ion binding44 (12.22%)73221146333
GO:0003677DNA binding43 (11.94%)3342979213
GO:0097367carbohydrate derivative binding39 (10.83%)62221144125
GO:0032553ribonucleotide binding39 (10.83%)62221144125
GO:0001882nucleoside binding38 (10.56%)62221143125
GO:0001883purine nucleoside binding38 (10.56%)62221143125
GO:0017076purine nucleotide binding38 (10.56%)62221143125
GO:0032550purine ribonucleoside binding38 (10.56%)62221143125
GO:0035639purine ribonucleoside triphosphate binding38 (10.56%)62221143125
GO:0032555purine ribonucleotide binding38 (10.56%)62221143125
GO:0032549ribonucleoside binding38 (10.56%)62221143125
GO:0005524ATP binding35 (9.72%)52021143125
GO:0030554adenyl nucleotide binding35 (9.72%)52021143125
GO:0032559adenyl ribonucleotide binding35 (9.72%)52021143125
GO:0016740transferase activity32 (8.89%)33031223132
GO:0016491oxidoreductase activity30 (8.33%)2322534450
GO:0005215transporter activity30 (8.33%)5404513413
GO:0001071nucleic acid binding transcription factor activity27 (7.50%)3130764201
GO:0003700sequence-specific DNA binding transcription factor activity27 (7.50%)3130764201
GO:0016301kinase activity21 (5.83%)22021020021
GO:0016773phosphotransferase activity, alcohol group as acceptor21 (5.83%)22021020021
GO:0004672protein kinase activity21 (5.83%)22021020021
GO:0022892substrate-specific transporter activity21 (5.83%)4403302212
GO:0016772transferase activity, transferring phosphorus-containing groups21 (5.83%)22021020021
GO:0009055electron carrier activity20 (5.56%)2212423220
GO:0008324cation transmembrane transporter activity19 (5.28%)4403102212
GO:0016817hydrolase activity, acting on acid anhydrides19 (5.28%)4221113113
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides19 (5.28%)4221113113
GO:0015075ion transmembrane transporter activity19 (5.28%)4403102212
GO:0017111nucleoside-triphosphatase activity19 (5.28%)4221113113
GO:0004674protein serine/threonine kinase activity19 (5.28%)2202920011
GO:0016462pyrophosphatase activity19 (5.28%)4221113113
GO:0022891substrate-specific transmembrane transporter activity19 (5.28%)4403102212
GO:0022857transmembrane transporter activity19 (5.28%)4403102212
GO:0022804active transmembrane transporter activity17 (4.72%)3303102212
GO:0005516calmodulin binding16 (4.44%)1002361111
GO:0015036disulfide oxidoreductase activity16 (4.44%)2212221220
GO:0016667oxidoreductase activity, acting on a sulfur group of donors16 (4.44%)2212221220
GO:0015035protein disulfide oxidoreductase activity16 (4.44%)2212221220
GO:0016887ATPase activity14 (3.89%)3201112112
GO:0016798hydrolase activity, acting on glycosyl bonds14 (3.89%)0211121222
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds14 (3.89%)0211121222
GO:0022890inorganic cation transmembrane transporter activity14 (3.89%)4302101210
GO:0046873metal ion transmembrane transporter activity13 (3.61%)4302001210
GO:0046914transition metal ion binding13 (3.61%)0010523110
GO:0016788hydrolase activity, acting on ester bonds12 (3.33%)1102321200
GO:0042623ATPase activity, coupled11 (3.06%)2201002112
GO:0043492ATPase activity, coupled to movement of substances11 (3.06%)2201002112
GO:0042625ATPase activity, coupled to transmembrane movement of ions11 (3.06%)2201002112
GO:0042626ATPase activity, coupled to transmembrane movement of substances11 (3.06%)2201002112
GO:0015405P-P-bond-hydrolysis-driven transmembrane transporter activity11 (3.06%)2201002112
GO:0019829cation-transporting ATPase activity11 (3.06%)2201002112
GO:0003682chromatin binding11 (3.06%)0011135000
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances11 (3.06%)2201002112
GO:0016874ligase activity11 (3.06%)0001122122
GO:0016791phosphatase activity11 (3.06%)1101321200
GO:0042578phosphoric ester hydrolase activity11 (3.06%)1101321200
GO:0015399primary active transmembrane transporter activity11 (3.06%)2201002112
GO:0043565sequence-specific DNA binding10 (2.78%)3120021001
GO:0016829lyase activity9 (2.50%)1000220112
GO:0046983protein dimerization activity9 (2.50%)1110121110
GO:0005509calcium ion binding8 (2.22%)1111201001
GO:0016879ligase activity, forming carbon-nitrogen bonds8 (2.22%)0001121120
GO:0003723RNA binding7 (1.94%)1000220101
GO:0015085calcium ion transmembrane transporter activity7 (1.94%)2200001110
GO:0072509divalent inorganic cation transmembrane transporter activity7 (1.94%)2200001110
GO:0004175endopeptidase activity7 (1.94%)0010111111
GO:0020037heme binding7 (1.94%)0010202110
GO:0005506iron ion binding7 (1.94%)0010202110
GO:0015077monovalent inorganic cation transmembrane transporter activity7 (1.94%)2102100100
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen7 (1.94%)0010202110
GO:0008233peptidase activity7 (1.94%)0010111111
GO:0070011peptidase activity, acting on L-amino acid peptides7 (1.94%)0010111111
GO:0004721phosphoprotein phosphatase activity7 (1.94%)1101211000
GO:0046906tetrapyrrole binding7 (1.94%)0010202110
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6 (1.67%)2100001110
GO:0015297antiporter activity6 (1.67%)1102100100
GO:0005388calcium-transporting ATPase activity6 (1.67%)2100001110
GO:0016835carbon-oxygen lyase activity6 (1.67%)1000210002
GO:0016837carbon-oxygen lyase activity, acting on polysaccharides6 (1.67%)1000210002
GO:0048037cofactor binding6 (1.67%)0000122001
GO:0015078hydrogen ion transmembrane transporter activity6 (1.67%)1102100100
GO:0016853isomerase activity6 (1.67%)1000120002
GO:0008168methyltransferase activity6 (1.67%)0100101111
GO:0030570pectate lyase activity6 (1.67%)1000210002
GO:0015291secondary active transmembrane transporter activity6 (1.67%)1102100100
GO:0015298solute:cation antiporter activity6 (1.67%)1102100100
GO:0015299solute:hydrogen antiporter activity6 (1.67%)1102100100
GO:0016741transferase activity, transferring one-carbon groups6 (1.67%)0100101111
GO:0008270zinc ion binding6 (1.67%)0000321000
GO:0016881acid-amino acid ligase activity5 (1.39%)0001111010
GO:0015491cation:cation antiporter activity5 (1.39%)1102000100
GO:0004497monooxygenase activity5 (1.39%)0010200110
GO:0016709oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5 (1.39%)0010200110
GO:0004650polygalacturonase activity5 (1.39%)0200010110
GO:0008395steroid hydroxylase activity5 (1.39%)0010200110
GO:0008289lipid binding4 (1.11%)0000210001
GO:0004222metalloendopeptidase activity4 (1.11%)0000011110
GO:0008237metallopeptidase activity4 (1.11%)0000011110
GO:0060089molecular transducer activity4 (1.11%)1201000000
GO:0035091phosphatidylinositol binding4 (1.11%)0000210001
GO:0005543phospholipid binding4 (1.11%)0000210001
GO:0015079potassium ion transmembrane transporter activity4 (1.11%)2001000100
GO:0004871signal transducer activity4 (1.11%)1201000000
GO:00055451-phosphatidylinositol binding3 (0.83%)0000110001
GO:0005525GTP binding3 (0.83%)1020000000
GO:0003924GTPase activity3 (0.83%)1020000000
GO:0050136NADH dehydrogenase (quinone) activity3 (0.83%)0000000120
GO:0008137NADH dehydrogenase (ubiquinone) activity3 (0.83%)0000000120
GO:0003954NADH dehydrogenase activity3 (0.83%)0000000120
GO:0016880acid-ammonia (or amide) ligase activity3 (0.83%)0000010110
GO:0004559alpha-mannosidase activity3 (0.83%)0010001001
GO:0016211ammonia ligase activity3 (0.83%)0000010110
GO:0016841ammonia-lyase activity3 (0.83%)0000010110
GO:0004190aspartic-type endopeptidase activity3 (0.83%)0010100001
GO:0070001aspartic-type peptidase activity3 (0.83%)0010100001
GO:0016840carbon-nitrogen lyase activity3 (0.83%)0000010110
GO:0030276clathrin binding3 (0.83%)0000110001
GO:0050662coenzyme binding3 (0.83%)0000111000
GO:0008092cytoskeletal protein binding3 (0.83%)0100001001
GO:0019001guanyl nucleotide binding3 (0.83%)1020000000
GO:0032561guanyl ribonucleotide binding3 (0.83%)1020000000
GO:0010279indole-3-acetic acid amido synthetase activity3 (0.83%)0001011000
GO:0015923mannosidase activity3 (0.83%)0010001001
GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity3 (0.83%)0010001001
GO:0015924mannosyl-oligosaccharide mannosidase activity3 (0.83%)0010001001
GO:0005451monovalent cation:hydrogen antiporter activity3 (0.83%)1001000100
GO:0016651oxidoreductase activity, acting on NAD(P)H3 (0.83%)0000000120
GO:0016655oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3 (0.83%)0000000120
GO:0022821potassium ion antiporter activity3 (0.83%)1001000100
GO:0015386potassium:hydrogen antiporter activity3 (0.83%)1001000100
GO:0004722protein serine/threonine phosphatase activity3 (0.83%)1100010000
GO:0030170pyridoxal phosphate binding3 (0.83%)0000011001
GO:0003735structural constituent of ribosome3 (0.83%)0000010101
GO:0005198structural molecule activity3 (0.83%)0000010101
GO:0016757transferase activity, transferring glycosyl groups3 (0.83%)1001100000
GO:00515372 iron, 2 sulfur cluster binding2 (0.56%)2000000000
GO:0004707MAP kinase activity2 (0.56%)1100000000
GO:0052691UDP-arabinopyranose mutase activity2 (0.56%)0000100001
GO:0008194UDP-glycosyltransferase activity2 (0.56%)0001100000
GO:0004812aminoacyl-tRNA ligase activity2 (0.56%)0000000002
GO:0019203carbohydrate phosphatase activity2 (0.56%)0000100100
GO:0005261cation channel activity2 (0.56%)1100000000
GO:0015267channel activity2 (0.56%)1100000000
GO:0042393histone binding2 (0.56%)0000100001
GO:0016860intramolecular oxidoreductase activity2 (0.56%)0000010001
GO:0016861intramolecular oxidoreductase activity, interconverting aldoses and ketoses2 (0.56%)0000010001
GO:0016866intramolecular transferase activity2 (0.56%)0000100001
GO:0005216ion channel activity2 (0.56%)1100000000
GO:0051536iron-sulfur cluster binding2 (0.56%)2000000000
GO:0016876ligase activity, forming aminoacyl-tRNA and related compounds2 (0.56%)0000000002
GO:0016875ligase activity, forming carbon-oxygen bonds2 (0.56%)0000000002
GO:0005319lipid transporter activity2 (0.56%)0000001001
GO:0000287magnesium ion binding2 (0.56%)0000001001
GO:0005384manganese ion transmembrane transporter activity2 (0.56%)0101000000
GO:0010486manganese:hydrogen antiporter activity2 (0.56%)0101000000
GO:0051540metal cluster binding2 (0.56%)2000000000
GO:0051139metal ion:hydrogen antiporter activity2 (0.56%)0101000000
GO:0008017microtubule binding2 (0.56%)0000001001
GO:0003777microtubule motor activity2 (0.56%)0000001001
GO:0003774motor activity2 (0.56%)0000001001
GO:0016614oxidoreductase activity, acting on CH-OH group of donors2 (0.56%)0000110000
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor2 (0.56%)0000110000
GO:0022803passive transmembrane transporter activity2 (0.56%)1100000000
GO:0005548phospholipid transporter activity2 (0.56%)0000001001
GO:0004012phospholipid-translocating ATPase activity2 (0.56%)0000001001
GO:0004647phosphoserine phosphatase activity2 (0.56%)0000010100
GO:0008022protein C-terminus binding2 (0.56%)0001001000
GO:0032403protein complex binding2 (0.56%)0000001001
GO:0046982protein heterodimerization activity2 (0.56%)1100000000
GO:0008565protein transporter activity2 (0.56%)0000200000
GO:0005057receptor signaling protein activity2 (0.56%)1100000000
GO:0004702receptor signaling protein serine/threonine kinase activity2 (0.56%)1100000000
GO:0019787small conjugating protein ligase activity2 (0.56%)0000100010
GO:0022838substrate-specific channel activity2 (0.56%)1100000000
GO:0016758transferase activity, transferring hexosyl groups2 (0.56%)0001100000
GO:0046915transition metal ion transmembrane transporter activity2 (0.56%)0101000000
GO:0004805trehalose-phosphatase activity2 (0.56%)0000100100
GO:0004807triose-phosphate isomerase activity2 (0.56%)0000010001
GO:0015631tubulin binding2 (0.56%)0000001001
GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity1 (0.28%)0000010000
GO:0009824AMP dimethylallyltransferase activity1 (0.28%)0000001000
GO:0010181FMN binding1 (0.28%)0000001000
GO:0004965G-protein coupled GABA receptor activity1 (0.28%)0100000000
GO:0004930G-protein coupled receptor activity1 (0.28%)0100000000
GO:0016917GABA receptor activity1 (0.28%)0100000000
GO:0008080N-acetyltransferase activity1 (0.28%)0000001000
GO:0016410N-acyltransferase activity1 (0.28%)0000001000
GO:0008170N-methyltransferase activity1 (0.28%)0000000100
GO:0051287NAD binding1 (0.28%)0000100000
GO:0008173RNA methyltransferase activity1 (0.28%)0000000100
GO:0008757S-adenosylmethionine-dependent methyltransferase activity1 (0.28%)0000000100
GO:0019789SUMO ligase activity1 (0.28%)0000000010
GO:0035250UDP-galactosyltransferase activity1 (0.28%)0001000000
GO:0035251UDP-glucosyltransferase activity1 (0.28%)0000100000
GO:0050378UDP-glucuronate 4-epimerase activity1 (0.28%)0000010000
GO:0016407acetyltransferase activity1 (0.28%)0000001000
GO:0010309acireductone dioxygenase [iron(II)-requiring] activity1 (0.28%)0100000000
GO:0003779actin binding1 (0.28%)0100000000
GO:0008794arsenate reductase (glutaredoxin) activity1 (0.28%)1000000000
GO:0030611arsenate reductase activity1 (0.28%)1000000000
GO:0005262calcium channel activity1 (0.28%)0100000000
GO:0004683calmodulin-dependent protein kinase activity1 (0.28%)1000000000
GO:0030246carbohydrate binding1 (0.28%)0000100000
GO:0008810cellulase activity1 (0.28%)0000000001
GO:0045430chalcone isomerase activity1 (0.28%)1000000000
GO:0008831dTDP-4-dehydrorhamnose reductase activity1 (0.28%)0000010000
GO:0051213dioxygenase activity1 (0.28%)0100000000
GO:0003725double-stranded RNA binding1 (0.28%)0000010000
GO:0004519endonuclease activity1 (0.28%)0001000000
GO:0016894endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters1 (0.28%)0001000000
GO:0004521endoribonuclease activity1 (0.28%)0001000000
GO:0016892endoribonuclease activity, producing 3'-phosphomonoesters1 (0.28%)0001000000
GO:0005231excitatory extracellular ligand-gated ion channel activity1 (0.28%)0100000000
GO:0005230extracellular ligand-gated ion channel activity1 (0.28%)0100000000
GO:0005234extracellular-glutamate-gated ion channel activity1 (0.28%)0100000000
GO:0015645fatty acid ligase activity1 (0.28%)0000001000
GO:0008378galactosyltransferase activity1 (0.28%)0001000000
GO:0022836gated channel activity1 (0.28%)0100000000
GO:0046527glucosyltransferase activity1 (0.28%)0000100000
GO:0008066glutamate receptor activity1 (0.28%)0100000000
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity1 (0.28%)0000100000
GO:0008466glycogenin glucosyltransferase activity1 (0.28%)0000100000
GO:0047216inositol 3-alpha-galactosyltransferase activity1 (0.28%)0001000000
GO:0016872intramolecular lyase activity1 (0.28%)1000000000
GO:0022839ion gated channel activity1 (0.28%)0100000000
GO:0004970ionotropic glutamate receptor activity1 (0.28%)0100000000
GO:0022834ligand-gated channel activity1 (0.28%)0100000000
GO:0015276ligand-gated ion channel activity1 (0.28%)0100000000
GO:0016877ligase activity, forming carbon-sulfur bonds1 (0.28%)0000001000
GO:0004467long-chain fatty acid-CoA ligase activity1 (0.28%)0000001000
GO:0004824lysine-tRNA ligase activity1 (0.28%)0000000001
GO:0004518nuclease activity1 (0.28%)0001000000
GO:0030613oxidoreductase activity, acting on phosphorus or arsenic in donors1 (0.28%)1000000000
GO:0030614oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor1 (0.28%)1000000000
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen1 (0.28%)0100000000
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1 (0.28%)0100000000
GO:0001871pattern binding1 (0.28%)0000100000
GO:0030247polysaccharide binding1 (0.28%)0000100000
GO:0005267potassium channel activity1 (0.28%)1000000000
GO:0016854racemase and epimerase activity1 (0.28%)0000010000
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives1 (0.28%)0000010000
GO:0004872receptor activity1 (0.28%)0100000000
GO:0000975regulatory region DNA binding1 (0.28%)0100000000
GO:0001067regulatory region nucleic acid binding1 (0.28%)0100000000
GO:0033897ribonuclease T2 activity1 (0.28%)0001000000
GO:0004540ribonuclease activity1 (0.28%)0001000000
GO:0038023signaling receptor activity1 (0.28%)0100000000
GO:0016229steroid dehydrogenase activity1 (0.28%)0000010000
GO:0033764steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1 (0.28%)0000010000
GO:0016423tRNA (guanine) methyltransferase activity1 (0.28%)0000000100
GO:0004809tRNA (guanine-N2-)-methyltransferase activity1 (0.28%)0000000100
GO:0000049tRNA binding1 (0.28%)0000000001
GO:0008175tRNA methyltransferase activity1 (0.28%)0000000100
GO:0044212transcription regulatory region DNA binding1 (0.28%)0100000000
GO:0000976transcription regulatory region sequence-specific DNA binding1 (0.28%)0100000000
GO:0016746transferase activity, transferring acyl groups1 (0.28%)0000001000
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups1 (0.28%)0000001000
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups1 (0.28%)0000001000
GO:0008135translation factor activity, nucleic acid binding1 (0.28%)1000000000
GO:0003743translation initiation factor activity1 (0.28%)1000000000
GO:0004888transmembrane signaling receptor activity1 (0.28%)0100000000
GO:0004842ubiquitin-protein ligase activity1 (0.28%)0000100000
GO:0051082unfolded protein binding1 (0.28%)0000010000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell149 (41.39%)2314792925138516
GO:0044464cell part149 (41.39%)2314792925138516
GO:0005622intracellular125 (34.72%)1810782423108413
GO:0044424intracellular part119 (33.06%)181068222297413
GO:0043229intracellular organelle106 (29.44%)16867192096312
GO:0043226organelle106 (29.44%)16867192096312
GO:0043231intracellular membrane-bounded organelle104 (28.89%)16867192086311
GO:0043227membrane-bounded organelle104 (28.89%)16867192086311
GO:0016020membrane88 (24.44%)13103618985313
GO:0005737cytoplasm76 (21.11%)1484412126439
GO:0044444cytoplasmic part64 (17.78%)964411115329
GO:0005634nucleus57 (15.83%)1033313133315
GO:0071944cell periphery47 (13.06%)9703873217
GO:0005886plasma membrane40 (11.11%)6703763215
GO:0044425membrane part36 (10.00%)6514812225
GO:0044446intracellular organelle part31 (8.61%)5121662305
GO:0044422organelle part31 (8.61%)5121662305
GO:0031224intrinsic to membrane25 (6.94%)5503302223
GO:0016021integral to membrane24 (6.67%)4503302223
GO:0032991macromolecular complex23 (6.39%)2111841104
GO:0030054cell junction19 (5.28%)2200461004
GO:0005911cell-cell junction19 (5.28%)2200461004
GO:0009506plasmodesma19 (5.28%)2200461004
GO:0009536plastid19 (5.28%)4202043103
GO:0055044symplast19 (5.28%)2200461004
GO:0009507chloroplast18 (5.00%)4202042103
GO:0043234protein complex18 (5.00%)2111731002
GO:0005739mitochondrion16 (4.44%)0210062113
GO:0005829cytosol15 (4.17%)2100440004
GO:0005576extracellular region15 (4.17%)4100170002
GO:0005794Golgi apparatus14 (3.89%)1122510002
GO:0005783endoplasmic reticulum14 (3.89%)3120221111
GO:0031090organelle membrane14 (3.89%)3110320103
GO:0070013intracellular organelle lumen13 (3.61%)2110340101
GO:0031974membrane-enclosed lumen13 (3.61%)2110340101
GO:0043233organelle lumen13 (3.61%)2110340101
GO:0043232intracellular non-membrane-bounded organelle11 (3.06%)1100221103
GO:0043228non-membrane-bounded organelle11 (3.06%)1100221103
GO:0031981nuclear lumen11 (3.06%)2110340000
GO:0044428nuclear part11 (3.06%)2110340000
GO:0005618cell wall10 (2.78%)3000130003
GO:0030312external encapsulating structure10 (2.78%)3000130003
GO:1902494catalytic complex7 (1.94%)1010410000
GO:0009941chloroplast envelope7 (1.94%)1001021101
GO:0044434chloroplast part7 (1.94%)1001021101
GO:0012505endomembrane system7 (1.94%)2010200101
GO:0005789endoplasmic reticulum membrane7 (1.94%)2010200101
GO:0044432endoplasmic reticulum part7 (1.94%)2010200101
GO:0031975envelope7 (1.94%)1001021101
GO:0042175nuclear outer membrane-endoplasmic reticulum membrane network7 (1.94%)2010200101
GO:0031967organelle envelope7 (1.94%)1001021101
GO:0009526plastid envelope7 (1.94%)1001021101
GO:0044435plastid part7 (1.94%)1001021101
GO:0005774vacuolar membrane7 (1.94%)1100120002
GO:0044437vacuolar part7 (1.94%)1100120002
GO:0005773vacuole7 (1.94%)1100120002
GO:0005654nucleoplasm6 (1.67%)1010220000
GO:0044451nucleoplasm part6 (1.67%)1010220000
GO:0030118clathrin coat5 (1.39%)0000310001
GO:0048475coated membrane5 (1.39%)0000310001
GO:0005768endosome5 (1.39%)0111110000
GO:0030117membrane coat5 (1.39%)0000310001
GO:0005730nucleolus5 (1.39%)1100120000
GO:0030529ribonucleoprotein complex5 (1.39%)0000110102
GO:0005840ribosome5 (1.39%)0000110102
GO:1990234transferase complex5 (1.39%)1010210000
GO:0043189H4/H2A histone acetyltransferase complex4 (1.11%)0010210000
GO:0035267NuA4 histone acetyltransferase complex4 (1.11%)0010210000
GO:0032777Piccolo NuA4 histone acetyltransferase complex4 (1.11%)0010210000
GO:1902493acetyltransferase complex4 (1.11%)0010210000
GO:0048046apoplast4 (1.11%)1000020001
GO:0000123histone acetyltransferase complex4 (1.11%)0010210000
GO:0009505plant-type cell wall4 (1.11%)2000010001
GO:0009570chloroplast stroma3 (0.83%)0000020001
GO:0044430cytoskeletal part3 (0.83%)1000001001
GO:0005856cytoskeleton3 (0.83%)1000001001
GO:0044445cytosolic part3 (0.83%)0000110001
GO:0022626cytosolic ribosome3 (0.83%)0000110001
GO:0015630microtubule cytoskeleton3 (0.83%)1000001001
GO:0009532plastid stroma3 (0.83%)0000020001
GO:0044391ribosomal subunit3 (0.83%)0000010101
GO:0009579thylakoid3 (0.83%)0100010001
GO:0030119AP-type membrane coat adaptor complex2 (0.56%)0000200000
GO:0044431Golgi apparatus part2 (0.56%)0000100001
GO:0031985Golgi cisterna2 (0.56%)0000100001
GO:0005795Golgi stack2 (0.56%)0000100001
GO:0000138Golgi trans cisterna2 (0.56%)0000100001
GO:0044427chromosomal part2 (0.56%)0100010000
GO:0005694chromosome2 (0.56%)0100010000
GO:0030131clathrin adaptor complex2 (0.56%)0000200000
GO:0019898extrinsic to membrane2 (0.56%)1001000000
GO:0005871kinesin complex2 (0.56%)0000001001
GO:0015934large ribosomal subunit2 (0.56%)0000000101
GO:0005770late endosome2 (0.56%)0101000000
GO:0005875microtubule associated complex2 (0.56%)0000001001
GO:0005762mitochondrial large ribosomal subunit2 (0.56%)0000000101
GO:0005759mitochondrial matrix2 (0.56%)0000000101
GO:0044429mitochondrial part2 (0.56%)0000000101
GO:0005761mitochondrial ribosome2 (0.56%)0000000101
GO:0000315organellar large ribosomal subunit2 (0.56%)0000000101
GO:0000313organellar ribosome2 (0.56%)0000000101
GO:0031984organelle subcompartment2 (0.56%)0000100001
GO:0005802trans-Golgi network2 (0.56%)0010010000
GO:1990104DNA bending complex1 (0.28%)0100000000
GO:0044815DNA packaging complex1 (0.28%)0100000000
GO:0016591DNA-directed RNA polymerase II, holoenzyme1 (0.28%)1000000000
GO:0000428DNA-directed RNA polymerase complex1 (0.28%)1000000000
GO:0030880RNA polymerase complex1 (0.28%)1000000000
GO:0019005SCF ubiquitin ligase complex1 (0.28%)0000100000
GO:0031225anchored to membrane1 (0.28%)1000000000
GO:0031969chloroplast membrane1 (0.28%)1000000000
GO:0000785chromatin1 (0.28%)0100000000
GO:0010369chromocenter1 (0.28%)0000010000
GO:0031461cullin-RING ubiquitin ligase complex1 (0.28%)0000100000
GO:0009898cytoplasmic side of plasma membrane1 (0.28%)0001000000
GO:0022627cytosolic small ribosomal subunit1 (0.28%)0000010000
GO:0031234extrinsic to cytoplasmic side of plasma membrane1 (0.28%)0001000000
GO:0042406extrinsic to endoplasmic reticulum membrane1 (0.28%)1000000000
GO:0031312extrinsic to organelle membrane1 (0.28%)1000000000
GO:0019897extrinsic to plasma membrane1 (0.28%)0001000000
GO:0009331glycerol-3-phosphate dehydrogenase complex1 (0.28%)0000100000
GO:0005834heterotrimeric G-protein complex1 (0.28%)0001000000
GO:0030176integral to endoplasmic reticulum membrane1 (0.28%)0000000100
GO:0031301integral to organelle membrane1 (0.28%)0000000100
GO:0031227intrinsic to endoplasmic reticulum membrane1 (0.28%)0000000100
GO:0031300intrinsic to organelle membrane1 (0.28%)0000000100
GO:0055029nuclear DNA-directed RNA polymerase complex1 (0.28%)1000000000
GO:0044798nuclear transcription factor complex1 (0.28%)1000000000
GO:0000786nucleosome1 (0.28%)0100000000
GO:1990204oxidoreductase complex1 (0.28%)0000100000
GO:0000325plant-type vacuole1 (0.28%)1000000000
GO:0009705plant-type vacuole membrane1 (0.28%)1000000000
GO:0044459plasma membrane part1 (0.28%)0001000000
GO:0042170plastid membrane1 (0.28%)1000000000
GO:0032993protein-DNA complex1 (0.28%)0100000000
GO:0030427site of polarized growth1 (0.28%)1000000000
GO:0015935small ribosomal subunit1 (0.28%)0000010000
GO:0005819spindle1 (0.28%)1000000000
GO:0005669transcription factor TFIID complex1 (0.28%)1000000000
GO:0005667transcription factor complex1 (0.28%)1000000000
GO:0017053transcriptional repressor complex1 (0.28%)0000010000
GO:0000151ubiquitin ligase complex1 (0.28%)0000100000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process199 (55.28%)1916913483118151317
GO:0044699single-organism process156 (43.33%)171571134201711915
GO:0008152metabolic process151 (41.94%)151078322417141113
GO:0071704organic substance metabolic process140 (38.89%)15107832231211913
GO:0044763single-organism cellular process138 (38.33%)161471028171311913
GO:0044238primary metabolic process134 (37.22%)12107732221111913
GO:0044237cellular metabolic process120 (33.33%)138562921118712
GO:0065007biological regulation105 (29.17%)11889201812856
GO:0050789regulation of biological process97 (26.94%)11778181811746
GO:0043170macromolecule metabolic process96 (26.67%)1064425189659
GO:0050794regulation of cellular process94 (26.11%)11778171711745
GO:0044260cellular macromolecule metabolic process90 (25.00%)963425178549
GO:0009058biosynthetic process83 (23.06%)9454161597311
GO:1901576organic substance biosynthetic process79 (21.94%)9454161486211
GO:0050896response to stimulus78 (21.67%)1182713177436
GO:1901360organic cyclic compound metabolic process75 (20.83%)