PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Matrix_126
Name: RBE
Description: N/A

#Associated genes: 193
#Associated InterPro terms: 250

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InterPro	Description	#Associated genes	gma
IPR027417	P-loop containing nucleoside triphosphate hydrolase	13 (6.74%)	13
IPR013083	Zinc finger, RING/FYVE/PHD-type	8 (4.15%)	8
IPR000719	Protein kinase domain	7 (3.63%)	7
IPR011009	Protein kinase-like domain	7 (3.63%)	7
IPR007087	Zinc finger, C2H2	7 (3.63%)	7
IPR017441	Protein kinase, ATP binding site	6 (3.11%)	6
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	6 (3.11%)	6
IPR011989	Armadillo-like helical	5 (2.59%)	5
IPR016024	Armadillo-type fold	5 (2.59%)	5
IPR016177	DNA-binding domain	5 (2.59%)	5
IPR012677	Nucleotide-binding, alpha-beta plait	5 (2.59%)	5
IPR004320	Protein of unknown function DUF241, plant	5 (2.59%)	5
IPR000504	RNA recognition motif domain	5 (2.59%)	5
IPR003593	AAA+ ATPase domain	4 (2.07%)	4
IPR001471	AP2/ERF domain	4 (2.07%)	4
IPR001251	CRAL-TRIO domain	4 (2.07%)	4
IPR011074	CRAL/TRIO, N-terminal domain	4 (2.07%)	4
IPR000095	CRIB domain	4 (2.07%)	4
IPR010255	Haem peroxidase	4 (2.07%)	4
IPR002016	Haem peroxidase, plant/fungal/bacterial	4 (2.07%)	4
IPR009057	Homeodomain-like	4 (2.07%)	4
IPR003441	NAC domain	4 (2.07%)	4
IPR019793	Peroxidases heam-ligand binding site	4 (2.07%)	4
IPR000823	Plant peroxidase	4 (2.07%)	4
IPR008936	Rho GTPase activation protein	4 (2.07%)	4
IPR000198	Rho GTPase-activating protein domain	4 (2.07%)	4
IPR008271	Serine/threonine-protein kinase, active site	4 (2.07%)	4
IPR011990	Tetratricopeptide-like helical	4 (2.07%)	4
IPR015880	Zinc finger, C2H2-like	4 (2.07%)	4
IPR011011	Zinc finger, FYVE/PHD-type	4 (2.07%)	4
IPR003959	ATPase, AAA-type, core	3 (1.55%)	3
IPR003103	BAG domain	3 (1.55%)	3
IPR010402	CCT domain	3 (1.55%)	3
IPR011257	DNA glycosylase	3 (1.55%)	3
IPR000306	FYVE zinc finger	3 (1.55%)	3
IPR023214	HAD-like domain	3 (1.55%)	3
IPR001752	Kinesin, motor domain	3 (1.55%)	3
IPR027640	Kinesin-like protein	3 (1.55%)	3
IPR005019	Methyladenine glycosylase	3 (1.55%)	3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	3 (1.55%)	3
IPR016040	NAD(P)-binding domain	3 (1.55%)	3
IPR018790	Protein of unknown function DUF2358	3 (1.55%)	3
IPR005225	Small GTP-binding protein domain	3 (1.55%)	3
IPR001806	Small GTPase superfamily	3 (1.55%)	3
IPR003579	Small GTPase superfamily, Rab type	3 (1.55%)	3
IPR020849	Small GTPase superfamily, Ras type	3 (1.55%)	3
IPR003578	Small GTPase superfamily, Rho type	3 (1.55%)	3
IPR008545	WEB family	3 (1.55%)	3
IPR017455	Zinc finger, FYVE-related	3 (1.55%)	3
IPR001841	Zinc finger, RING-type	3 (1.55%)	3
IPR003960	ATPase, AAA-type, conserved site	2 (1.04%)	2
IPR002110	Ankyrin repeat	2 (1.04%)	2
IPR020683	Ankyrin repeat-containing domain	2 (1.04%)	2
IPR003340	B3 DNA binding domain	2 (1.04%)	2
IPR001071	Cellular retinaldehyde binding/alpha-tocopherol transport	2 (1.04%)	2
IPR002423	Chaperonin Cpn60/TCP-1	2 (1.04%)	2
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	2 (1.04%)	2
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	2 (1.04%)	2
IPR012763	DNA polymerase III, subunit gamma/ tau	2 (1.04%)	2
IPR015300	DNA-binding pseudobarrel domain	2 (1.04%)	2
IPR004314	Domain of unknown function DUF239	2 (1.04%)	2
IPR025521	Domain of unknown function DUF4409	2 (1.04%)	2
IPR019378	GDP-fucose protein O-fucosyltransferase	2 (1.04%)	2
IPR008979	Galactose-binding domain-like	2 (1.04%)	2
IPR027409	GroEL-like apical domain	2 (1.04%)	2
IPR001356	Homeobox domain	2 (1.04%)	2
IPR009768	Microtubule-associated protein 70	2 (1.04%)	2
IPR003527	Mitogen-activated protein (MAP) kinase, conserved site	2 (1.04%)	2
IPR002885	Pentatricopeptide repeat	2 (1.04%)	2
IPR000642	Peptidase M41	2 (1.04%)	2
IPR011546	Peptidase M41, FtsH extracellular	2 (1.04%)	2
IPR005936	Peptidase, FtsH	2 (1.04%)	2
IPR019794	Peroxidase, active site	2 (1.04%)	2
IPR027483	Phosphatidylinositol-4-phosphate 5-kinase, C-terminal	2 (1.04%)	2
IPR027484	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain	2 (1.04%)	2
IPR002498	Phosphatidylinositol-4-phosphate 5-kinase, core	2 (1.04%)	2
IPR016034	Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup	2 (1.04%)	2
IPR011993	Pleckstrin homology-like domain	2 (1.04%)	2
IPR012876	Protein of unknown function DUF1677, plant	2 (1.04%)	2
IPR007855	RNA-dependent RNA polymerase, eukaryotic-type	2 (1.04%)	2
IPR012337	Ribonuclease H-like domain	2 (1.04%)	2
IPR001440	Tetratricopeptide TPR1	2 (1.04%)	2
IPR019734	Tetratricopeptide repeat	2 (1.04%)	2
IPR013026	Tetratricopeptide repeat-containing domain	2 (1.04%)	2
IPR013766	Thioredoxin domain	2 (1.04%)	2
IPR012336	Thioredoxin-like fold	2 (1.04%)	2
IPR002487	Transcription factor, K-box	2 (1.04%)	2
IPR002100	Transcription factor, MADS-box	2 (1.04%)	2
IPR000626	Ubiquitin domain	2 (1.04%)	2
IPR012946	X8	2 (1.04%)	2
IPR007656	Zein-binding domain	2 (1.04%)	2
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	2 (1.04%)	2
IPR001876	Zinc finger, RanBP2-type	2 (1.04%)	2
IPR005519	Acid phosphatase (Class B)	1 (0.52%)	1
IPR010028	Acid phosphatase, plant	1 (0.52%)	1
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	1 (0.52%)	1
IPR000043	Adenosylhomocysteinase	1 (0.52%)	1
IPR001837	Adenylate cyclase-associated CAP	1 (0.52%)	1
IPR013912	Adenylate cyclase-associated CAP, C-terminal	1 (0.52%)	1
IPR013992	Adenylate cyclase-associated CAP, N-terminal	1 (0.52%)	1
IPR000850	Adenylate kinase/UMP-CMP kinase	1 (0.52%)	1
IPR013785	Aldolase-type TIM barrel	1 (0.52%)	1
IPR000225	Armadillo	1 (0.52%)	1
IPR003042	Aromatic-ring hydroxylase-like	1 (0.52%)	1
IPR010525	Auxin response factor	1 (0.52%)	1
IPR014733	Barwin-like endoglucanase	1 (0.52%)	1
IPR004827	Basic-leucine zipper domain	1 (0.52%)	1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	1 (0.52%)	1
IPR013591	Brevis radix (BRX) domain	1 (0.52%)	1
IPR017901	C-CAP/cofactor C-like domain	1 (0.52%)	1
IPR000008	C2 domain	1 (0.52%)	1
IPR025687	C4-type zinc-finger of DNA polymerase delta	1 (0.52%)	1
IPR018106	CAP, conserved site, N-terminal	1 (0.52%)	1
IPR006599	CARP motif	1 (0.52%)	1
IPR024395	CLASP N-terminal domain	1 (0.52%)	1
IPR014877	CRM1 C-terminal domain	1 (0.52%)	1
IPR001757	Cation-transporting P-type ATPase	1 (0.52%)	1
IPR006544	Cation-transporting P-type ATPase, subfamily V	1 (0.52%)	1
IPR011006	CheY-like superfamily	1 (0.52%)	1
IPR022796	Chlorophyll A-B binding protein	1 (0.52%)	1
IPR001344	Chlorophyll A-B binding protein, plant	1 (0.52%)	1
IPR023329	Chlorophyll a/b binding protein domain	1 (0.52%)	1
IPR003672	CobN/magnesium chelatase	1 (0.52%)	1
IPR008972	Cupredoxin	1 (0.52%)	1
IPR016098	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	1 (0.52%)	1
IPR014876	DEK, C-terminal	1 (0.52%)	1
IPR007694	DNA helicase, DnaB-like, C-terminal	1 (0.52%)	1
IPR023211	DNA polymerase, palm domain	1 (0.52%)	1
IPR006172	DNA-directed DNA polymerase, family B	1 (0.52%)	1
IPR017964	DNA-directed DNA polymerase, family B, conserved site	1 (0.52%)	1
IPR006133	DNA-directed DNA polymerase, family B, exonuclease domain	1 (0.52%)	1
IPR006134	DNA-directed DNA polymerase, family B, multifunctional domain	1 (0.52%)	1
IPR004578	DNA-directed DNA polymerase, family B, pol2	1 (0.52%)	1
IPR002220	DapA-like	1 (0.52%)	1
IPR005263	Dihydrodipicolinate synthase (4-hydroxy-tetrahydrodipicolinate synthase), DapA	1 (0.52%)	1
IPR020625	Dihydrodipicolinate synthetase, active site	1 (0.52%)	1
IPR020624	Dihydrodipicolinate synthetase, conserved site	1 (0.52%)	1
IPR001623	DnaJ domain	1 (0.52%)	1
IPR013899	Domain of unknown function DUF1771	1 (0.52%)	1
IPR025640	Domain of unknown function DUF4339	1 (0.52%)	1
IPR006887	Domain of unknown function DUF625	1 (0.52%)	1
IPR006936	Domain of unknown function DUF640	1 (0.52%)	1
IPR000620	Drug/metabolite transporter	1 (0.52%)	1
IPR011948	Dullard phosphatase domain, eukaryotic	1 (0.52%)	1
IPR007286	EAP30	1 (0.52%)	1
IPR002963	Expansin	1 (0.52%)	1
IPR007117	Expansin, cellulose-binding-like domain	1 (0.52%)	1
IPR007118	Expansin/Lol pI	1 (0.52%)	1
IPR007112	Expansin/pollen allergen, DPBB domain	1 (0.52%)	1
IPR013598	Exportin-1/Importin-beta-like	1 (0.52%)	1
IPR019771	F-actin capping protein, beta subunit, conserved site	1 (0.52%)	1
IPR001698	F-actin-capping protein subunit beta	1 (0.52%)	1
IPR001810	F-box domain	1 (0.52%)	1
IPR003169	GYF	1 (0.52%)	1
IPR011777	Geranylgeranyl reductase family	1 (0.52%)	1
IPR011774	Geranylgeranyl reductase, plant/cyanobacteria	1 (0.52%)	1
IPR010253	Geranylgeranyl reductase, plant/prokaryotic	1 (0.52%)	1
IPR002347	Glucose/ribitol dehydrogenase	1 (0.52%)	1
IPR014978	Glutamine-Leucine-Glutamine, QLQ	1 (0.52%)	1
IPR013781	Glycoside hydrolase, catalytic domain	1 (0.52%)	1
IPR000490	Glycoside hydrolase, family 17	1 (0.52%)	1
IPR017853	Glycoside hydrolase, superfamily	1 (0.52%)	1
IPR000357	HEAT	1 (0.52%)	1
IPR021133	HEAT, type 2	1 (0.52%)	1
IPR001312	Hexokinase	1 (0.52%)	1
IPR022673	Hexokinase, C-terminal	1 (0.52%)	1
IPR022672	Hexokinase, N-terminal	1 (0.52%)	1
IPR019807	Hexokinase, conserved site	1 (0.52%)	1
IPR009071	High mobility group box domain	1 (0.52%)	1
IPR025776	Histone-lysine N-methyltransferase SUVR1/2/4	1 (0.52%)	1
IPR008422	Homeobox KN domain	1 (0.52%)	1
IPR001494	Importin-beta, N-terminal domain	1 (0.52%)	1
IPR003855	K+ potassium transporter	1 (0.52%)	1
IPR015915	Kelch-type beta propeller	1 (0.52%)	1
IPR019821	Kinesin, motor region, conserved site	1 (0.52%)	1
IPR004864	Late embryogenesis abundant protein, LEA-14	1 (0.52%)	1
IPR006511	Lateral Root Primordium type 1, C-terminal	1 (0.52%)	1
IPR025875	Leucine rich repeat 4	1 (0.52%)	1
IPR001611	Leucine-rich repeat	1 (0.52%)	1
IPR003591	Leucine-rich repeat, typical subtype	1 (0.52%)	1
IPR013210	Leucine-rich repeat-containing N-terminal, type 2	1 (0.52%)	1
IPR022571	Magnesium chelatase, subunit H, N-terminal	1 (0.52%)	1
IPR011771	Magnesium-chelatase, subunit H	1 (0.52%)	1
IPR001739	Methyl-CpG DNA binding	1 (0.52%)	1
IPR001117	Multicopper oxidase, type 1	1 (0.52%)	1
IPR011706	Multicopper oxidase, type 2	1 (0.52%)	1
IPR011707	Multicopper oxidase, type 3	1 (0.52%)	1
IPR017930	Myb domain	1 (0.52%)	1
IPR002587	Myo-inositol-1-phosphate synthase	1 (0.52%)	1
IPR013021	Myo-inositol-1-phosphate synthase, GAPDH-like	1 (0.52%)	1
IPR004274	NLI interacting factor	1 (0.52%)	1
IPR008250	P-type ATPase, A domain	1 (0.52%)	1
IPR023299	P-type ATPase, cytoplasmic domain N	1 (0.52%)	1
IPR018303	P-type ATPase, phosphorylation site	1 (0.52%)	1
IPR000014	PAS domain	1 (0.52%)	1
IPR006563	POX domain	1 (0.52%)	1
IPR002641	Patatin/Phospholipase A2-related	1 (0.52%)	1
IPR001646	Pentapeptide repeat	1 (0.52%)	1
IPR001096	Peptidase C13, legumain	1 (0.52%)	1
IPR000528	Plant lipid transfer protein/Par allergen	1 (0.52%)	1
IPR001849	Pleckstrin homology domain	1 (0.52%)	1
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4	1 (0.52%)	1
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	1 (0.52%)	1
IPR019587	Polyketide cyclase/dehydrase	1 (0.52%)	1
IPR007728	Pre-SET domain	1 (0.52%)	1
IPR003606	Pre-SET zinc-binding sub-group	1 (0.52%)	1
IPR008511	Protein BYPASS-related	1 (0.52%)	1
IPR006946	Protein of unknown function DUF642	1 (0.52%)	1
IPR007818	Protein of unknown function DUF702	1 (0.52%)	1
IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain	1 (0.52%)	1
IPR003954	RNA recognition motif domain, eukaryote	1 (0.52%)	1
IPR002041	Ran GTPase	1 (0.52%)	1
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	1 (0.52%)	1
IPR000408	Regulator of chromosome condensation, RCC1	1 (0.52%)	1
IPR003388	Reticulon	1 (0.52%)	1
IPR002906	Ribosomal protein S27a	1 (0.52%)	1
IPR021036	Ribosomal protein S35, mitochondrial	1 (0.52%)	1
IPR009009	RlpA-like double-psi beta-barrel domain	1 (0.52%)	1
IPR001005	SANT/Myb domain	1 (0.52%)	1
IPR001214	SET domain	1 (0.52%)	1
IPR023393	START-like domain	1 (0.52%)	1
IPR012919	Sad1/UNC-like, C-terminal	1 (0.52%)	1
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	1 (0.52%)	1
IPR002198	Short-chain dehydrogenase/reductase SDR	1 (0.52%)	1
IPR020904	Short-chain dehydrogenase/reductase, conserved site	1 (0.52%)	1
IPR001789	Signal transduction response regulator, receiver domain	1 (0.52%)	1
IPR024156	Small GTPase superfamily, ARF type	1 (0.52%)	1
IPR002625	Smr protein/MutS2 C-terminal	1 (0.52%)	1
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	1 (0.52%)	1
IPR013105	Tetratricopeptide TPR2	1 (0.52%)	1
IPR006171	Toprim domain	1 (0.52%)	1
IPR017887	Transcription factor TCP subgroup	1 (0.52%)	1
IPR005333	Transcription factor, TCP	1 (0.52%)	1
IPR021771	Triacylglycerol lipase	1 (0.52%)	1
IPR027032	Twinkle protein	1 (0.52%)	1
IPR003613	U box domain	1 (0.52%)	1
IPR019956	Ubiquitin	1 (0.52%)	1
IPR019954	Ubiquitin conserved site	1 (0.52%)	1
IPR018848	WIYLD domain	1 (0.52%)	1
IPR014977	WRC	1 (0.52%)	1
IPR011991	Winged helix-turn-helix DNA-binding domain	1 (0.52%)	1
IPR006780	YABBY protein	1 (0.52%)	1
IPR000315	Zinc finger, B-box	1 (0.52%)	1
IPR000571	Zinc finger, CCCH-type	1 (0.52%)	1
IPR001594	Zinc finger, DHHC-type, palmitoyltransferase	1 (0.52%)	1
IPR003851	Zinc finger, Dof-type	1 (0.52%)	1
IPR001965	Zinc finger, PHD-type	1 (0.52%)	1
IPR019786	Zinc finger, PHD-type, conserved site	1 (0.52%)	1
IPR006510	Zinc finger, lateral root primordium type 1	1 (0.52%)	1
IPR011332	Zinc-binding ribosomal protein	1 (0.52%)	1