Matrix_394 | DREB_U | Not Available | | 90.26% |
Matrix_385 | DEAR4 | Not Available | | 90.08% |
Matrix_244 | DREB2C | Not Available | | 89.11% |
Matrix_61 | ATCBF3 | Not Available | | 86.06% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 85.80% |
Matrix_409 | DEAR3 | Not Available | | 78.75% |
Matrix_73 | DEAR3; RAP2.9; RAP2.10 | Not Available | | 76.64% |
Matrix_478 | AT1G01250 | Not Available | | 75.77% |
Motif_32 | DREB2A; DREB1A; AtTINY2; DREB1C; DREB1B | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression.Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 74.58% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 74.17% |
Matrix_448 | ATERF6 | Not Available | | 73.37% |
Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 73.27% |
Motif_620 | DREB1&2 BS in rd29a | Related to responsiveness to drought, low-temperature or high-salt stress; Binding site of DREB1 and DREB2: Binding site of Arabidopsis CBF1(C-repeat/DRE binding factor); Overexpression of DREB1A activated the expression of stress tolerance genes; CBF1 overexpression induces COR genes and enhances freezing tolerance; Heterologous CBF1 expression enhances oxidative stresses tolerance; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis;Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor | | 73.24% |
Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 72.84% |
Matrix_242 | AT2G25820; AT3G16280; AT4G32800; TINY2; tny | Not Available | | 72.72% |
Matrix_224 | ERF1 | Not Available | | 72.05% |
Matrix_288 | RAP2.3 | Not Available | | 71.24% |
Matrix_433 | ATERF1 | Not Available | | 70.47% |
Matrix_355 | ERF10; ERF11 | Not Available | | 70.02% |
Matrix_363 | RAP2.3 | Not Available | | 69.63% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 69.45% |
Matrix_321 | HRD | Not Available | | 69.38% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 69.36% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 69.07% |
Matrix_138 | RRTF1 | Not Available | | 68.97% |
Matrix_193 | RAV1 | Not Available | | 68.90% |
Matrix_265 | NGA3 | Not Available | | 68.90% |
Matrix_452 | MYB46 | Not Available | | 68.83% |
Matrix_119 | RRTF1 | Not Available | | 67.82% |
Matrix_362 | DEAR3 | Not Available | | 67.72% |
Matrix_387 | ORA47 | Not Available | | 67.45% |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | | 66.53% |
Motif_509 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 66.10% |
Matrix_151 | ASIL1 | Not Available | | 65.77% |
Motif_394 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 65.70% |
Matrix_292 | FTQ4 | Not Available | | 65.52% |
Matrix_253 | ETT | Not Available | | 65.07% |
Matrix_196 | TCP20; AT5G41030 | Not Available | | 64.95% |
Motif_54 | LTREATLTI78 | Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana | | 64.92% |
Motif_319 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 64.58% |
Motif_89 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 64.58% |
Matrix_329 | WRKY12 | Not Available | | 64.38% |
Matrix_277 | RAP2.6 | Not Available | | 64.29% |
Motif_144 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 64.26% |
Motif_99 | DREB1A; DREB1C; DREB1B | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression;Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit | | 64.22% |
Matrix_91 | CRF3 | Not Available | | 64.16% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 64.06% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 63.94% |
Matrix_293 | WRKY38 | Not Available | | 63.84% |
Motif_478 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 63.74% |
Matrix_426 | CRF1; CRF2 | Not Available | | 63.30% |
Motif_607 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 63.24% |
Motif_100 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 62.35% |
Motif_140 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 62.35% |
Matrix_376 | WRKY45 | Not Available | | 62.05% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 61.98% |
Matrix_410 | TOE2 | Not Available | | 61.89% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 61.39% |
Matrix_261 | ATERF-1 | Not Available | | 61.27% |
Motif_2 | ACGTSEED2 | ACGT motif related to seed expression; Gene: French bean phaseolin; transacting factor: 02 | | 61.06% |
Matrix_139 | OBF5 | Not Available | | 60.93% |
Matrix_86 | CRF5; CRF6; CRF4 | Not Available | | 60.84% |
Matrix_332 | SPT; ALC | Not Available | | 60.35% |
Matrix_237 | MYB55 | Not Available | | 60.28% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 60.18% |
Matrix_506 | DRNL; ATERF-4 | Not Available | | 59.84% |
Matrix_45 | DRN | Not Available | | 59.73% |
Matrix_171 | LBD3; LBD4 | Not Available | | 59.70% |
Matrix_456 | bZIP60 | Not Available | | 59.48% |
Motif_643 | DRE2COREZMRAB17 | DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABA | | 59.23% |
Matrix_484 | ATERF13 | Not Available | | 59.21% |
Matrix_343 | AT2G33710 | Not Available | | 58.94% |
Matrix_234 | RAP2.3 | Not Available | | 58.89% |
Motif_687 | AtWER | Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis | | 58.78% |
Motif_101 | MYB61 | AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network | | 58.72% |
Matrix_477 | RAV1 | Not Available | | 58.71% |
Matrix_467 | RAV1 | Not Available | | 58.71% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 58.71% |
Matrix_475 | AT5G64220 | Not Available | | 58.62% |
Matrix_147 | ERF3; AT1G80580 | Not Available | | 58.47% |
Matrix_146 | ORA47 | Not Available | | 58.32% |
Matrix_295 | ERF1 | Not Available | | 58.23% |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | | 58.20% |
Matrix_378 | ATERF1 | Not Available | | 58.04% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 58.02% |
Matrix_360 | ORA59 | Not Available | | 57.98% |
Matrix_373 | E2FE | Not Available | | 57.92% |
Matrix_272 | DEAR4 | Not Available | | 57.85% |
Motif_278 | CELLCYCLESC | cell cycle box found in URS2 (-940/-200) of HO gene of S.cerevisiae; cell-cycle-specific activation of transcription | | 57.84% |
Matrix_186 | FHY3 | Not Available | | 57.83% |
Matrix_223 | MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1 | Not Available | | 57.54% |
Matrix_26 | ATMYB3; MYB24 | Not Available | | 57.48% |
Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 57.46% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 57.44% |
Motif_399 | UPRMOTIFIAT | Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc. | | 57.38% |
Matrix_402 | TOE1 | Not Available | | 57.20% |
Matrix_473 | RRTF1 | Not Available | | 57.08% |
Motif_293 | NONAMERATH4 | Nonamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | | 57.05% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 57.00% |
Matrix_252 | RAP2.6 | Not Available | | 56.71% |
Matrix_393 | REM1 | Not Available | | 56.71% |
Matrix_446 | LBD16 | Not Available | | 56.68% |
Matrix_22 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 56.54% |
Matrix_5 | AT5G51190; ERF104 | Not Available | | 56.41% |
Matrix_141 | AT3G25990 | Not Available | | 56.36% |
Motif_368 | CBF1 BS in cor15a | Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs | | 56.29% |
Matrix_319 | TEM1 | Not Available | | 56.23% |
Motif_233 | DRE1COREZMRAB17 | DRE1 core found in maize rab17 gene promoter; DRE1 was protected, in in vivo footprinting, by a protein in embryos specifically, but in leaves, was protected when was treated with ABA and drought; rab17 is expressed during late embryogenesis, and is induced by ABA | | 56.15% |
Matrix_517 | ERF12 | Not Available | | 56.04% |
Motif_127 | SBOXATRBCS | S-box conserved in several rbcS promoters in Arabidopsis; ABI4 binding site; Important for the sugar and ABA responsiveness of CMA5 | | 55.94% |
Motif_454 | DRECRTCOREAT | Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower) | | 55.85% |
Motif_535 | ACIPVPAL2 | ACI element found at -83 to -74 of bean PAL2 promoter; AC-rich element; ACI element is required for vascular-specific gene expression; See also ACIIPVPAL2 and ACIIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissue-specific expression of pAL2 gene | | 55.47% |
Motif_405 | DREB2A; DREB1A | Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses | | 55.35% |
Matrix_159 | TEM2 | Not Available | | 55.28% |
Matrix_12 | EIN3; EIL2 | Not Available | | 55.26% |
Matrix_192 | FHY3/FAR1 | Not Available | | 55.24% |
Matrix_420 | ANAC58 | Not Available | | 55.18% |
Motif_203 | bZIP23; bZIP19 | Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency | | 55.16% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 55.11% |
Matrix_480 | BES1 | Not Available | | 55.09% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 55.04% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 54.91% |
Matrix_150 | UNE10; PIF7 | Not Available | | 54.89% |
Motif_402 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 54.85% |
Motif_254 | MYB46; MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | | 54.81% |
Matrix_400 | MYB46 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | | 54.81% |
Matrix_486 | MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | | 54.81% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 54.81% |
Matrix_334 | AT3G23230 | Not Available | | 54.80% |
Matrix_476 | bHLH115; bHLH34 | Not Available | | 54.80% |
Matrix_500 | WRKY43 | Not Available | | 54.75% |
Matrix_389 | ILR3 | Not Available | | 54.74% |
Motif_457 | AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 54.72% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 54.63% |
Matrix_260 | CAMTA3 | Not Available | | 54.63% |
Motif_311 | ANAC019; ANAC055; ANAC072 | Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter | | 54.59% |
Matrix_249 | WRKY11 | Not Available | | 54.55% |
Matrix_323 | BIM3 | Not Available | | 54.51% |
Matrix_23 | ANAC46 | Not Available | | 54.44% |
Motif_436 | WRKY18 | Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis | | 54.44% |
Motif_60 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 54.34% |
Motif_50 | AtERF-7; AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses | | 54.34% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 54.30% |
Motif_621 | bZIP23; bZIP19 | Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency | | 54.27% |
Matrix_84 | AtGRF6 | Not Available | | 54.23% |
Matrix_38 | SPL14 | Not Available | | 54.21% |
Motif_209 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 54.13% |
Matrix_365 | AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1 | Not Available | | 54.06% |
Matrix_60 | AT1G01260; AT5G57150 | Not Available | | 54.00% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 53.98% |
Matrix_113 | ABI5 | Not Available | | 53.96% |
Matrix_287 | ERF2 | Not Available | | 53.87% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 53.84% |
Matrix_479 | TOE1 | Not Available | | 53.80% |
Matrix_233 | MYC3 | Not Available | | 53.79% |
Matrix_406 | ATERF-7 | Not Available | | 53.65% |
Matrix_120 | BEE2 | Not Available | | 53.59% |
Matrix_291 | EDF3 | Not Available | | 53.57% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 53.55% |
Matrix_462 | ATERF-8 | Not Available | | 53.52% |
Matrix_449 | BIM2 | Not Available | | 53.49% |
Matrix_122 | ABF1; AREB2 | Not Available | | 53.48% |
Matrix_167 | ZAT6 | Not Available | | 53.43% |
Matrix_20 | ANAC030; NST1; NAC066 | Not Available | | 53.40% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 53.36% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 53.34% |
Motif_37 | AtERF-4 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 53.27% |
Matrix_509 | LEC2 | Not Available | | 53.26% |
Motif_606 | NAPINMOTIFBN | Sequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seeds | | 53.25% |
Matrix_330 | MYC2; TT8 | Not Available | | 53.11% |
Matrix_430 | TOE2 | Not Available | | 53.10% |
Matrix_101 | ERF5 | Not Available | | 53.05% |
Motif_426 | MYB58; MYB63 | MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis | | 53.02% |
Matrix_1 | TOE2 | Not Available | | 52.98% |
Matrix_380 | ATMYR1 | Not Available | | 52.86% |
Matrix_176 | MYB98 | Not Available | | 52.83% |
Motif_259 | AtSR1 | A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants | | 52.78% |
Matrix_465 | MYC4 | Not Available | | 52.76% |
Matrix_422 | TOE1 | Not Available | | 52.64% |
Matrix_320 | MYC4 | Not Available | | 52.63% |
Motif_274 | MYB1 binding site motif | Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein | | 52.61% |
Matrix_308 | INO | Not Available | | 52.43% |
Matrix_9 | AT5G04760 | Not Available | | 52.39% |
Matrix_116 | ANAC55 | Not Available | | 52.27% |
Matrix_169 | E2F1 | Not Available | | 52.25% |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | | 52.13% |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 51.87% |
Matrix_187 | CDC5 | Not Available | | 51.81% |
Matrix_349 | CDC5 | Not Available | | 51.81% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 51.81% |
Motif_67 | LS5ATPR1 | LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors | | 51.76% |
Matrix_145 | GBF4; AT5G44080 | Not Available | | 51.75% |
Matrix_128 | TGA2 | Not Available | | 51.74% |
Motif_310 | ANAERO3CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curator | | 51.70% |
Motif_265 | GCAACREPEATZMZEIN | GCAAC repeat found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize; GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb | | 51.65% |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | | 51.63% |
Matrix_423 | AT3G04030 | Not Available | | 51.62% |
Motif_625 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 51.60% |
Matrix_344 | ATERF15; AT4G18450 | Not Available | | 51.54% |
Motif_107 | O2F2BE2S1 | opaque-2 recognition site F2 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F2 is a new O2-binding sequence related to the O2 target sites of the Coix alpha-coxin, the maize b-32 genes and the AP-1 pseudopalindrome | | 51.51% |
Motif_95 | UPRE2AT | XBP1 binding site-like sequence found in the plant UPRE (unfolded protein response element) in Arabidopsis thaliana;Either of ERSEII or XBP1 binding sites is essential and sufficient for the UPR | | 51.51% |
Matrix_437 | MYC2 | Not Available | | 51.43% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 51.35% |
Matrix_80 | BIM1 | Not Available | | 51.34% |
Matrix_46 | AT4G21895 | Not Available | | 51.21% |
Matrix_109 | GBF3 | Not Available | | 51.19% |
Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | | 51.16% |
Matrix_399 | TGA1 | Not Available | | 51.15% |
Matrix_282 | bZIP60 | Not Available | | 51.12% |
Matrix_341 | HMGA | Not Available | | 51.07% |
Motif_94 | UP1ATMSD | Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | | 51.00% |
Matrix_258 | WOX13 | Not Available | | 50.92% |
Matrix_188 | SPL4 | Not Available | | 50.85% |
Motif_288 | NONAMERMOTIFTAH3H4 | Nonamer motif found in promoter of wheat histone genes H3 and H4 | | 50.76% |
Matrix_197 | NAP | Not Available | | 50.52% |
Matrix_97 | APRR2 | Not Available | | 50.47% |
Matrix_17 | WRKY22 | Not Available | | 50.46% |
Motif_685 | PALINDROMICCBOXGM | Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence | | 50.46% |
Matrix_432 | AT1G77920 | Not Available | | 50.44% |
Matrix_397 | GT2L | Not Available | | 50.42% |
Motif_58 | LREBOXIPCCHS1 | BoxI; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; MRECHS (MRE=Myb Recognition Element)Recognition site of MYB305 and a novel factor PcMYB1 (Myb1 from P. crispum); PcMYB1 contains only one MYB repeat | | 50.38% |
Motif_223 | LTRE1HVBLT49 | LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGAC | | 50.32% |
Matrix_142 | ZFP8 | Not Available | | 50.25% |
Matrix_70 | GATA26 | Not Available | | 50.20% |
Matrix_181 | Dof5.7 | Not Available | | 50.18% |
Motif_550 | MRE motif in CHS | MREAtCHS (MRE = Myb Recognition Element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-A/blue light responsiveness;Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system | | 50.12% |
Motif_516 | BZIP12; ABI5 | The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis | | 50.12% |
Matrix_221 | SPL7 | Not Available | | 50.12% |
Matrix_104 | PI | Not Available | | 50.11% |
Motif_167 | SBP-box promoter motif | Molecular characterisation of the Arabidopsis SBP-box genes | | 50.11% |