PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_446
Name: LBD16
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_406	ATERF-7	Not Available	74.06%
Matrix_462	ATERF-8	Not Available	73.32%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	71.02%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	70.40%
Matrix_151	ASIL1	Not Available	69.17%
Matrix_59	AT4G00238; AT4G00250	Not Available	68.45%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	68.20%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	67.48%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	67.44%
Matrix_169	E2F1	Not Available	66.37%
Matrix_308	INO	Not Available	66.33%
Matrix_355	ERF10; ERF11	Not Available	65.17%
Matrix_109	GBF3	Not Available	65.05%
Matrix_171	LBD3; LBD4	Not Available	64.99%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	64.55%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	64.32%
Matrix_259	AT1G50680; AT1G51120	Not Available	64.16%
Matrix_397	GT2L	Not Available	63.05%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	62.87%
Matrix_433	ATERF1	Not Available	62.86%
Matrix_380	ATMYR1	Not Available	62.86%
Matrix_322	NST3; ANAC015; BRN2	Not Available	62.77%
Matrix_472	ZN_C2_H2	Not Available	62.57%
Matrix_53	MYC3	Not Available	61.62%
Matrix_311	TGA1	Not Available	61.40%
Matrix_331	GBF1	Not Available	61.35%
Matrix_387	ORA47	Not Available	61.22%
Matrix_335	HSFB2A	Not Available	61.05%
Matrix_12	EIN3; EIL2	Not Available	60.86%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	60.77%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	60.69%
Matrix_128	TGA2	Not Available	60.66%
Matrix_61	ATCBF3	Not Available	60.56%
Matrix_142	ZFP8	Not Available	60.49%
Matrix_87	AT1G19000	Not Available	60.43%
Matrix_166	TGA4	Not Available	60.24%
Matrix_420	ANAC58	Not Available	60.22%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	60.12%
Matrix_277	RAP2.6	Not Available	59.99%
Matrix_141	AT3G25990	Not Available	59.79%
Matrix_101	ERF5	Not Available	59.79%
Matrix_70	GATA26	Not Available	59.76%
Matrix_373	E2FE	Not Available	59.75%
Matrix_321	HRD	Not Available	59.52%
Matrix_17	WRKY22	Not Available	59.49%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	59.47%
Matrix_23	ANAC46	Not Available	59.35%
Matrix_265	NGA3	Not Available	59.34%
Matrix_193	RAV1	Not Available	59.34%
Matrix_389	ILR3	Not Available	59.33%
Matrix_57	WIN1; SHN3; SHN2	Not Available	59.02%
Matrix_113	ABI5	Not Available	58.94%
Matrix_328	AT1G76580	Not Available	58.83%
Matrix_463	HAT3.1	Not Available	58.74%
Matrix_84	AtGRF6	Not Available	58.70%
Matrix_423	AT3G04030	Not Available	58.69%
Matrix_50	ATERF14; AT5G43410	Not Available	58.67%
Matrix_80	BIM1	Not Available	58.59%
Matrix_296	GBF2	Not Available	58.47%
Matrix_286	GATA7	Not Available	58.38%
Matrix_352	LEC2	Not Available	58.34%
Matrix_26	ATMYB3; MYB24	Not Available	58.25%
Matrix_341	HMGA	Not Available	58.16%
Matrix_432	AT1G77920	Not Available	57.98%
Matrix_120	BEE2	Not Available	57.94%
Matrix_409	DEAR3	Not Available	57.92%
Matrix_300	bZIP68; bZIP16	Not Available	57.88%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	57.55%
Matrix_465	MYC4	Not Available	57.55%
Matrix_91	CRF3	Not Available	57.49%
Matrix_448	ATERF6	Not Available	57.47%
Matrix_46	AT4G21895	Not Available	57.43%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	57.42%
Matrix_438	AtbZIP63	Not Available	57.41%
Matrix_489	RAV1	Not Available	57.39%
Matrix_75	WRKY29	Not Available	57.33%
Matrix_492	ETT	Not Available	57.22%
Matrix_330	MYC2; TT8	Not Available	57.18%
Matrix_186	FHY3	Not Available	57.10%
Matrix_518	AT2G21230	Not Available	56.88%
Matrix_369	AT2G18300	Not Available	56.79%
Matrix_493	AT1G22985; AT1G71130	Not Available	56.71%
Matrix_92	AT1G33760	Not Available	56.68%
Matrix_176	MYB98	Not Available	56.64%
Matrix_143	GATA14; GATA6; GATA5	Not Available	56.60%
Matrix_287	ERF2	Not Available	56.53%
Matrix_226	GATA1	Not Available	56.49%
Matrix_174	ZAT2	Not Available	56.40%
Matrix_363	RAP2.3	Not Available	56.40%
Matrix_204	WOX13	Not Available	56.40%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	56.36%
Matrix_430	TOE2	Not Available	56.31%
Matrix_418	KNAT6; KNAT2	Not Available	56.29%
Matrix_206	CUC1; ANAC100	Not Available	56.28%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	56.21%
Matrix_181	Dof5.7	Not Available	56.16%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	56.05%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	56.03%
Matrix_449	BIM2	Not Available	56.02%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	55.90%
Matrix_467	RAV1	Not Available	55.90%
Matrix_477	RAV1	Not Available	55.90%
Matrix_66	AtLEC2	Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis	55.88%
Matrix_323	BIM3	Not Available	55.86%
Matrix_374	AT5G07580; AT5G61590	Not Available	55.85%
Matrix_333	GATA3	Not Available	55.85%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	55.81%
Matrix_261	ATERF-1	Not Available	55.77%
Matrix_244	DREB2C	Not Available	55.76%
Matrix_156	POC1	Not Available	55.63%
Matrix_288	RAP2.3	Not Available	55.61%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	55.49%
Matrix_273	ANAC55	Not Available	55.35%
Matrix_212	ATHB-12	Not Available	55.32%
Matrix_241	HB-1; AT5G44180	Not Available	55.29%
Matrix_55	PIF3	Not Available	55.08%
Matrix_382	AT3G04850	Not Available	55.08%
Motif_326	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	55.06%
Matrix_416	ASL5	Not Available	54.82%
Matrix_248	ZFP5	Not Available	54.69%
Matrix_93	YAB5	Not Available	54.55%
Matrix_3	WRKY48	Not Available	54.46%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	54.40%
Matrix_344	ATERF15; AT4G18450	Not Available	54.36%
Motif_438	CAMTA5; CAMTA1; CAMTA2; CAMTA3	Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance	54.33%
Matrix_227	AT1G64620	Not Available	54.23%
Matrix_370	WRKY50; WRKY51	Not Available	54.22%
Motif_94	UP1ATMSD	Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	54.19%
Matrix_399	TGA1	Not Available	54.19%
Matrix_116	ANAC55	Not Available	54.18%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	54.11%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	54.07%
Matrix_45	DRN	Not Available	54.01%
Matrix_52	ZAT18	Not Available	53.99%
Matrix_340	HSFC1	Not Available	53.96%
Matrix_451	STY1	Not Available	53.90%
Motif_259	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	53.60%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	53.53%
Matrix_394	DREB_U	Not Available	53.46%
Matrix_152	EIL1; AT5G65100	Not Available	53.41%
Matrix_37	GATA27	Not Available	53.37%
Matrix_192	FHY3/FAR1	Not Available	53.35%
Matrix_78	AT3G45610	Not Available	53.31%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	53.27%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	53.27%
Matrix_5	AT5G51190; ERF104	Not Available	53.16%
Matrix_349	CDC5	Not Available	53.09%
Matrix_187	CDC5	Not Available	53.09%
Matrix_332	SPT; ALC	Not Available	53.06%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	53.06%
Matrix_170	AT5G47660	Not Available	53.03%
Matrix_100	AT1G48610	Not Available	52.96%
Matrix_195	GATA2; GATA4	Not Available	52.95%
Matrix_243	RAP2.12; RAP2.2	Not Available	52.94%
Matrix_484	ATERF13	Not Available	52.91%
Matrix_104	PI	Not Available	52.80%
Matrix_260	CAMTA3	Not Available	52.69%
Matrix_119	RRTF1	Not Available	52.69%
Motif_651	E2Fc; E2Fd; E2Fe; E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	52.49%
Matrix_99	DOF4.7	Not Available	52.38%
Matrix_479	TOE1	Not Available	52.38%
Matrix_415	WRKY27	Not Available	52.30%
Matrix_129	ABF1	Not Available	52.27%
Matrix_385	DEAR4	Not Available	52.24%
Motif_620	DREB1&2 BS in rd29a	Related to responsiveness to drought, low-temperature or high-salt stress; Binding site of DREB1 and DREB2: Binding site of Arabidopsis CBF1(C-repeat/DRE binding factor); Overexpression of DREB1A activated the expression of stress tolerance genes; CBF1 overexpression induces COR genes and enhances freezing tolerance; Heterologous CBF1 expression enhances oxidative stresses tolerance; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis;Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor	52.23%
Matrix_431	ATHB21; HB-3	Not Available	52.19%
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	52.19%
Matrix_41	anac058	Not Available	52.13%
Matrix_147	ERF3; AT1G80580	Not Available	52.03%
Matrix_20	ANAC030; NST1; NAC066	Not Available	52.01%
Matrix_38	SPL14	Not Available	51.98%
Matrix_237	MYB55	Not Available	51.94%
Matrix_384	ATWRKY17	Not Available	51.89%
Matrix_196	TCP20; AT5G41030	Not Available	51.88%
Matrix_162	AtPHR1	Not Available	51.73%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	51.67%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	51.64%
Matrix_491	AT1G68670; AT3G25790	Not Available	51.61%
Matrix_398	TBP2; ATTRB2	Not Available	51.60%
Matrix_478	AT1G01250	Not Available	51.58%
Motif_478	DREB2A; DREB1A	Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems;Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	51.37%
Matrix_110	ATABI4; AT3G57600	Not Available	51.31%
Matrix_313	ATMYB65; MYB33	Not Available	51.23%
Motif_97	E2Fc; E2Fd	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	51.07%
Matrix_271	AT3G16350	Not Available	51.05%
Matrix_292	FTQ4	Not Available	51.04%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	51.03%
Matrix_188	SPL4	Not Available	50.95%
Matrix_422	TOE1	Not Available	50.95%
Matrix_410	TOE2	Not Available	50.81%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	50.74%
Matrix_504	WRKY40	Not Available	50.70%
Matrix_274	EDF3	Not Available	50.67%
Matrix_502	AT3G13040	Not Available	50.65%
Matrix_427	ZAT14	Not Available	50.65%
Matrix_253	ETT	Not Available	50.65%
Matrix_402	TOE1	Not Available	50.63%
Matrix_97	APRR2	Not Available	50.63%
Matrix_69	AT2G03500	Not Available	50.61%
Matrix_408	GATA12	Not Available	50.60%
Matrix_224	ERF1	Not Available	50.60%
Matrix_456	bZIP60	Not Available	50.55%
Matrix_40	TCP2	Not Available	50.51%
Matrix_153	AP2	Not Available	50.44%
Matrix_138	RRTF1	Not Available	50.39%
Motif_167	SBP-box promoter motif	Molecular characterisation of the Arabidopsis SBP-box genes	50.33%
Matrix_1	TOE2	Not Available	50.18%
Matrix_234	RAP2.3	Not Available	50.13%
Matrix_295	ERF1	Not Available	50.13%