Matrix_214 | AP1 | Not Available | | 69.56% |
Matrix_359 | FLC | Not Available | | 66.46% |
Matrix_443 | AGL15 | Not Available | | 65.67% |
Matrix_403 | BZR1 | Not Available | | 65.07% |
Matrix_264 | ATAREB1 | Not Available | | 63.48% |
Matrix_153 | AP2 | Not Available | | 62.91% |
Matrix_428 | SEP4 | Not Available | | 62.57% |
Motif_117 | RYREPEAT4 | RY repeat motif; Sph element; seed expression; ABA; Gene: maize C1, wheat Em, rice rab16A, maize Rab17; Transacting factor: VP1 (maize C1); See RYREPEAT2; The RY sequence motif does not play a major role in VP1 or ABA regulation of Em gene in protoplast; VP1 gene is specifically required for expression of the maturation program in seed development | | 62.52% |
Matrix_499 | ARR18 | Not Available | | 62.18% |
Matrix_439 | AP3 | Not Available | | 62.00% |
Matrix_417 | SEP4 | Not Available | | 61.43% |
Matrix_2 | SEP4 | Not Available | | 61.43% |
Matrix_310 | AGL3 | The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein | | 61.43% |
Matrix_222 | AGL2 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | | 61.39% |
Matrix_28 | SEP1 | Not Available | | 61.39% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 61.18% |
Matrix_77 | PRR5 | Not Available | | 60.92% |
Matrix_352 | LEC2 | Not Available | | 60.19% |
Matrix_413 | RAV1 | Not Available | | 60.12% |
Matrix_298 | RAV1 | Not Available | | 60.12% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 60.06% |
Matrix_369 | AT2G18300 | Not Available | | 59.99% |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 59.87% |
Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 59.08% |
Matrix_194 | HYH; HY5 | Not Available | | 59.01% |
Matrix_257 | NAC050; ANAC051; anac057; NAC2 | Not Available | | 58.93% |
Matrix_338 | AP2 | Not Available | | 58.85% |
Matrix_186 | FHY3 | Not Available | | 58.65% |
Matrix_107 | AtSPL3 | Not Available | | 58.26% |
Matrix_304 | AtSPL3 | Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains | | 58.25% |
Matrix_498 | AT2G28710; AT3G46070; AT3G46080; ZAT7 | Not Available | | 57.62% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 57.62% |
Matrix_467 | RAV1 | Not Available | | 57.62% |
Matrix_477 | RAV1 | Not Available | | 57.62% |
Matrix_213 | ATHB22 | Not Available | | 57.41% |
Matrix_104 | PI | Not Available | | 57.35% |
Matrix_55 | PIF3 | Not Available | | 57.17% |
Matrix_49 | FHY3/FAR1 | Not Available | | 57.07% |
Matrix_514 | DYT1 | Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development | | 56.73% |
Matrix_466 | PRR5 | Not Available | | 56.24% |
Matrix_30 | AtSPL8 | Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains | | 56.23% |
Matrix_414 | AGL15 | Not Available | | 56.18% |
Matrix_375 | AtSPL8 | Not Available | | 56.12% |
Matrix_353 | HAT5 | Not Available | | 56.02% |
Motif_180 | AGL2 binding site motif | Binding consensus sequence of Arabidopsis AGL2 (AGAMOUS-like 2); AGL2 contains MADS domain; AGL2 binds DNA as a dimer | | 55.83% |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | | 55.77% |
Matrix_301 | PIL5 | Not Available | | 55.38% |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 55.36% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 55.29% |
Matrix_51 | LFY | Not Available | | 55.12% |
Matrix_184 | AGL15 | Not Available | | 54.82% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 54.76% |
Matrix_349 | CDC5 | Not Available | | 54.74% |
Matrix_187 | CDC5 | Not Available | | 54.74% |
Matrix_229 | CDC5 | A cdc5+ homolog of a higher plant, Arabidopsis thaliana | | 54.73% |
Matrix_87 | AT1G19000 | Not Available | | 54.54% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 54.50% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 54.46% |
Matrix_453 | EIL3 | Not Available | | 54.46% |
Matrix_309 | FLC | Not Available | | 53.95% |
Matrix_271 | AT3G16350 | Not Available | | 53.91% |
Matrix_192 | FHY3/FAR1 | Not Available | | 53.90% |
Matrix_523 | FUSCA3 | Not Available | | 53.90% |
Motif_96 | GARE4HVEPB1 | GARE-4 found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -142 to -156; Required for GA induction; Putative binding site of transcription factor, GAMyB | | 53.77% |
Matrix_121 | SHP1 | Not Available | | 53.68% |
Matrix_386 | AGL1 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | | 53.68% |
Matrix_290 | AP2 | Not Available | | 53.66% |
Matrix_203 | GATA9; GATA12 | Not Available | | 53.65% |
Matrix_480 | BES1 | Not Available | | 53.64% |
Motif_224 | CGTGTSPHZMC1 | Sequence found in the maize C1 gene promoter; Located between -147 to -132; Containing Sph element; Required for ABA responsiveness | | 53.57% |
Matrix_33 | SPL11; SPL10; SPL2 | Not Available | | 53.52% |
Motif_456 | FUS3; ABI3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 53.43% |
Motif_367 | FUS3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 53.40% |
Matrix_205 | AGL15 | Not Available | | 53.30% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 53.30% |
Matrix_333 | GATA3 | Not Available | | 53.21% |
Matrix_191 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 53.16% |
Matrix_472 | ZN_C2_H2 | Not Available | | 53.08% |
Matrix_19 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 53.02% |
Matrix_258 | WOX13 | Not Available | | 53.01% |
Matrix_399 | TGA1 | Not Available | | 53.00% |
Matrix_122 | ABF1; AREB2 | Not Available | | 52.92% |
Matrix_302 | HAT1; HAT2 | Not Available | | 52.79% |
Matrix_330 | MYC2; TT8 | Not Available | | 52.75% |
Matrix_133 | DYT1 | Not Available | | 52.69% |
Matrix_251 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | | 52.68% |
Matrix_22 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 52.58% |
Matrix_465 | MYC4 | Not Available | | 52.55% |
Matrix_358 | AGL15 | Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study | | 52.48% |
Matrix_204 | WOX13 | Not Available | | 52.45% |
Matrix_174 | ZAT2 | Not Available | | 52.44% |
Matrix_43 | AG | Not Available | | 52.41% |
Matrix_445 | AG | Not Available | | 52.41% |
Matrix_98 | AG | Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS | | 52.41% |
Matrix_83 | PRR5 | Not Available | | 52.24% |
Matrix_25 | AP3 | Not Available | | 52.20% |
Matrix_29 | AP1 | Not Available | | 52.08% |
Matrix_68 | AtMYB77 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84 | | 52.08% |
Matrix_47 | AtMYB77 | Not Available | | 52.08% |
Matrix_226 | GATA1 | Not Available | | 51.94% |
Matrix_195 | GATA2; GATA4 | Not Available | | 51.90% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 51.89% |
Matrix_356 | PRR5 | Not Available | | 51.89% |
Matrix_162 | AtPHR1 | Not Available | | 51.88% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 51.81% |
Matrix_124 | AtHB23; ATHB13; ATHB20; ATHB5 | Not Available | | 51.81% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 51.74% |
Matrix_438 | AtbZIP63 | Not Available | | 51.65% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 51.65% |
Matrix_463 | HAT3.1 | Not Available | | 51.63% |
Matrix_169 | E2F1 | Not Available | | 51.61% |
Matrix_69 | AT2G03500 | Not Available | | 51.59% |
Matrix_149 | PI | Not Available | | 51.57% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 51.57% |
Matrix_384 | ATWRKY17 | Not Available | | 51.55% |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | | 51.54% |
Matrix_345 | POC1 | Not Available | | 51.54% |
Matrix_80 | BIM1 | Not Available | | 51.48% |
Motif_301 | SPHZMC1 | Sph element found in the maize C1 gene promoter; Located between -142 and -132; Essential for VP1 activation; VP1 gene is specifically required for expression of the maturation program in seed development; VP1 is a novel transcription factor possibly involved in potentiation of a seed-specific hormone response | | 51.42% |
Matrix_18 | AP3 | Not Available | | 51.40% |
Matrix_71 | ATHB7 | Not Available | | 51.37% |
Matrix_502 | AT3G13040 | Not Available | | 51.36% |
Matrix_227 | AT1G64620 | Not Available | | 51.35% |
Motif_675 | FUS3; ABI3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 51.34% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 51.33% |
Matrix_39 | AP1 | Not Available | | 51.33% |
Matrix_219 | AGL15 | Not Available | | 51.32% |
Matrix_81 | YAB1 | Not Available | | 51.32% |
Matrix_140 | ATHB5 | DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 51.31% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 51.30% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 51.10% |
Matrix_464 | AGL15; AGL71 | Not Available | | 51.00% |
Matrix_53 | MYC3 | Not Available | | 50.99% |
Matrix_420 | ANAC58 | Not Available | | 50.99% |
Matrix_3 | WRKY48 | Not Available | | 50.98% |
Motif_494 | TOPOISOM | Topoisomerase cleavage site consensus sequence; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR) | | 50.93% |
Matrix_13 | HAT5 | Not Available | | 50.86% |
Matrix_93 | YAB5 | Not Available | | 50.82% |
Matrix_434 | ARR11 | Not Available | | 50.82% |
Matrix_75 | WRKY29 | Not Available | | 50.82% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 50.81% |
Matrix_449 | BIM2 | Not Available | | 50.76% |
Matrix_106 | AT5G47390 | Not Available | | 50.66% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 50.59% |
Matrix_141 | AT3G25990 | Not Available | | 50.51% |
Matrix_407 | AP1 | Not Available | | 50.49% |
Motif_152 | MEJARELELOX | MeJa-responsive element (MeJaRE) in tomato lipoxygenase (LOX) gene; Related to tomato lipoxygenase gene expression during development and for MeJa (methyl jasmonate)-responsiveness | | 50.49% |
Matrix_120 | BEE2 | Not Available | | 50.48% |
Motif_30 | HSELIKENTACIDICPR1 | HSE-like motif in -56 region of acidic PR1 gene of tobacco; not found in basic PR1 gene | | 50.43% |
Matrix_447 | RVE1 | Not Available | | 50.39% |
Matrix_17 | WRKY22 | Not Available | | 50.36% |
Matrix_404 | OBP4 | Not Available | | 50.36% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 50.31% |
Matrix_323 | BIM3 | Not Available | | 50.30% |
Matrix_97 | APRR2 | Not Available | | 50.27% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 50.25% |
Matrix_286 | GATA7 | Not Available | | 50.21% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 50.17% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 50.16% |
Matrix_324 | AT2G01060 | Not Available | | 50.15% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 50.14% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 50.11% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 50.09% |
Matrix_361 | AT1G25550 | Not Available | | 50.07% |
Matrix_364 | FLC | Not Available | | 50.06% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 50.03% |
Motif_238 | AtWER | Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis | | 50.02% |
Matrix_408 | GATA12 | Not Available | | 50.01% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 50.00% |