PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_107
Name: AtSPL3
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_375	AtSPL8	Not Available	86.33%
Matrix_30	AtSPL8	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	83.48%
Matrix_304	AtSPL3	Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains	83.02%
Matrix_33	SPL11; SPL10; SPL2	Not Available	66.22%
Matrix_264	ATAREB1	Not Available	61.65%
Matrix_105	SPL14	Not Available	61.24%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	60.99%
Matrix_499	ARR18	Not Available	59.93%
Matrix_342	SPL14	Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance	59.74%
Matrix_301	PIL5	Not Available	59.05%
Matrix_213	ATHB22	Not Available	59.00%
Matrix_251	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	58.70%
Matrix_123	FUSCA3	Not Available	58.26%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	58.23%
Matrix_49	FHY3/FAR1	Not Available	58.20%
Matrix_443	AGL15	Not Available	57.84%
Matrix_338	AP2	Not Available	57.31%
Matrix_47	AtMYB77	Not Available	57.27%
Matrix_68	AtMYB77	More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84	57.27%
Matrix_414	AGL15	Not Available	57.06%
Matrix_359	FLC	Not Available	56.93%
Matrix_403	BZR1	Not Available	56.67%
Matrix_214	AP1	Not Available	56.23%
Matrix_153	AP2	Not Available	55.52%
Matrix_192	FHY3/FAR1	Not Available	55.38%
Matrix_104	PI	Not Available	55.17%
Matrix_386	AGL1	DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation	55.03%
Matrix_121	SHP1	Not Available	55.03%
Matrix_413	RAV1	Not Available	54.81%
Matrix_298	RAV1	Not Available	54.81%
Matrix_194	HYH; HY5	Not Available	54.73%
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	54.53%
Matrix_364	FLC	Not Available	54.52%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	54.52%
Matrix_77	PRR5	Not Available	54.32%
Matrix_404	OBP4	Not Available	54.29%
Matrix_43	AG	Not Available	54.21%
Matrix_445	AG	Not Available	54.21%
Matrix_98	AG	Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS	54.21%
Matrix_246	ARR10	Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators	54.15%
Matrix_345	POC1	Not Available	53.99%
Matrix_118	PIF3_2	Direct targeting of light signals to a promoter element-bound transcription factor	53.99%
Matrix_466	PRR5	Not Available	53.71%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	53.54%
Matrix_290	AP2	Not Available	53.39%
Matrix_191	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	53.28%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	53.19%
Matrix_309	FLC	Not Available	53.15%
Matrix_186	FHY3	Not Available	53.13%
Matrix_358	AGL15	Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study	53.10%
Matrix_369	AT2G18300	Not Available	53.05%
Matrix_151	ASIL1	Not Available	52.92%
Matrix_2	SEP4	Not Available	52.79%
Matrix_310	AGL3	The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein	52.79%
Matrix_417	SEP4	Not Available	52.79%
Matrix_55	PIF3	Not Available	52.70%
Matrix_467	RAV1	Not Available	52.65%
Matrix_477	RAV1	Not Available	52.65%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	52.65%
Matrix_270	ANT	DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA	52.64%
Matrix_89	SOC1	Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	52.43%
Matrix_3	WRKY48	Not Available	52.29%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	52.27%
Matrix_510	AtMYB84	More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana	52.26%
Matrix_179	AtMYB84; MYB36; MYB68; O49746_ARATH	Not Available	52.26%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	52.08%
Matrix_28	SEP1	Not Available	52.08%
Matrix_222	AGL2	DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation	52.08%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	51.90%
Matrix_496	ATMYB15	Not Available	51.75%
Matrix_127	AtMYB15	More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana	51.75%
Matrix_208	AP1	Not Available	51.59%
Matrix_438	AtbZIP63	Not Available	51.50%
Matrix_122	ABF1; AREB2	Not Available	51.50%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	51.42%
Matrix_418	KNAT6; KNAT2	Not Available	51.36%
Matrix_428	SEP4	Not Available	51.36%
Matrix_211	MYB3	Not Available	51.31%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	51.30%
Matrix_416	ASL5	Not Available	51.24%
Matrix_450	SPL7	Not Available	51.20%
Matrix_172	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	51.15%
Matrix_83	PRR5	Not Available	51.11%
Matrix_19	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	51.03%
Matrix_420	ANAC58	Not Available	50.93%
Matrix_259	AT1G50680; AT1G51120	Not Available	50.86%
Matrix_75	WRKY29	Not Available	50.83%
Matrix_85	SPL5	Not Available	50.80%
Matrix_149	PI	Not Available	50.69%
Matrix_308	INO	Not Available	50.63%
Matrix_31	SPL1	Not Available	50.56%
Matrix_180	SPL1	Not Available	50.52%
Motif_134	ANAC092	NAC Transcription Factor ORE1 and Senescence-Induced BIFUNCTIONAL NUCLEASE1 (BFN1) Constitute a Regulatory Cascade in Arabidopsis	50.52%
Matrix_384	ATWRKY17	Not Available	50.36%
Matrix_25	AP3	Not Available	50.30%
Matrix_492	ETT	Not Available	50.27%
Matrix_305	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	50.26%
Matrix_352	LEC2	Not Available	50.23%
Matrix_273	ANAC55	Not Available	50.19%
Matrix_447	RVE1	Not Available	50.11%
Matrix_353	HAT5	Not Available	50.08%
Matrix_286	GATA7	Not Available	50.06%
Matrix_51	LFY	Not Available	50.03%
Matrix_370	WRKY50; WRKY51	Not Available	50.03%
Matrix_313	ATMYB65; MYB33	Not Available	50.01%
Motif_635	LFY	Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins	50.00%