Gene description
GO/InterPro description
Gene
Gene Family
GO ID
All species
Lotus japonicus
Medicago truncatula
Glycine max
Malus domestica
Fragaria vesca
Manihot esculenta
Ricinus communis
Populus trichocarpa
Arabidopsis thaliana
Arabidopsis lyrata
Carica papaya
Theobroma cacao
Vitis vinifera
Oryza sativa ssp. japonica
Oryza sativa ssp. indica
Brachypodium distachyon
Sorghum bicolor
Zea mays
Selaginella moellendorffii
Physcomitrella patens
Ostreococcus lucimarinus
Ostreococcus tauri
Micromonas sp. RCC299
Volvox carteri
Chlamydomonas reinhardtii
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Program
blastn
blastp
blastx
tblastn
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Database
PLAZA v2.5 protein sequences
PLAZA v2.5 transcript sequences
PLAZA v2.5 genome sequence Arabidopsis lyrata
PLAZA v2.5 genome sequence Arabidopsis thaliana
PLAZA v2.5 genome sequence Brachypodium distachyon
PLAZA v2.5 genome sequence Carica papaya
PLAZA v2.5 genome sequence Chlamydomonas reinhardtii
PLAZA v2.5 genome sequence Fragaria vesca
PLAZA v2.5 genome sequence Glycine max
PLAZA v2.5 genome sequence Lotus japonicus
PLAZA v2.5 genome sequence Malus domestica
PLAZA v2.5 genome sequence Manihot esculenta
PLAZA v2.5 genome sequence Medicago truncatula
PLAZA v2.5 genome sequence Micromonas sp. RCC299
PLAZA v2.5 genome sequence Oryza sativa ssp. indica
PLAZA v2.5 genome sequence Oryza sativa ssp. japonica
PLAZA v2.5 genome sequence Ostreococcus lucimarinus
PLAZA v2.5 genome sequence Ostreococcus tauri
PLAZA v2.5 genome sequence Physcomitrella patens
PLAZA v2.5 genome sequence Populus trichocarpa
PLAZA v2.5 genome sequence Ricinus communis
PLAZA v2.5 genome sequence Selaginella moellendorffii
PLAZA v2.5 genome sequence Sorghum bicolor
PLAZA v2.5 genome sequence Theobroma cacao
PLAZA v2.5 genome sequence Vitis vinifera
PLAZA v2.5 genome sequence Volvox carteri
PLAZA v2.5 genome sequence Zea mays
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Matrix
PAM30
PAM70
BLOSUM45
BLOSUM62
BLOSUM80
Perform gapped alignment
Query Genetic codes - (T)Blastx only
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Alignment view
Pairwise
query-anchored showing identities
query-anchored no identities
flat query-anchored, show identities
flat query-anchored, no identities
query-anchored no identities and blunt ends
flat query-anchored, no identities and blunt ends
XML Blast output
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Alignments
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