WGDotplot  

Tool that reports in a pairwise manner all colinear regions between and/or within species.

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WGDotplot
Pairwise exploration of genome-wide colinearity
 
           

           


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Circle Plot
Explore intra-species colinearity (optionally include colinearity with other species or apply functional filter)
 





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WGDotplot (Applet)
Interactively explore genome-wide colinearity between multiple species (support intra- and inter-species comparisons including up to 5 genomes)