Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'ORTHO05D000632', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'ORTHO05D000632' $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'ORTHO05D000632' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'ORTHO05D000632', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'ORTHO05D000632' $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'ORTHO05D000632' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'ORTHO05D000632', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'ORTHO05D000632' $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'ORTHO05D000632' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'ORTHO05D000632', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000632', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '724', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' ) ), 'genes' => array( 'A03p11150' => 'bna', 'A05p14180' => 'bna', 'A06p05060' => 'bna', 'A08p35400' => 'bna', 'A09p66090' => 'bna', 'A09p66100' => 'bna', 'A10p17610' => 'bna', 'Aa31LG1G12440' => 'aar', 'Aa31LG5G7710' => 'aar', 'Aa31LG5G7740' => 'aar', 'Aa31sc36G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4860' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4861' => 'aag', 'Actinidia05267' => 'ach', 'Actinidia11420' => 'ach', 'Actinidia39240' => 'ach', 'Ah.10g032900' => 'amhyb', 'Ah.10g032930' => 'amhyb', 'Ah.10g032940' => 'amhyb', 'Ah.10g032950' => 'amhyb', 'Ah.15g099040' => 'amhyb', 'AL1G18210' => 'aly', 'AL1G18230' => 'aly', 'AL1G18260' => 'aly', 'AL1G55740' => 'aly', 'AL5G34590' => 'aly', 'AL8G37000' => 'aly', 'Aqoxy2G03017' => 'aox', 'Aqoxy2G03600' => 'aox', 'Aqoxy4G03218' => 'aox', 'Aqoxy6G00586' => 'aox', 'Aqoxy6G00617' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08YRK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2T4DYX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9C90RH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G03TES' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PSFB2E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S49I6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UHN8JW' => 'arhy', 'AT1G07920' => 'ath', 'AT1G07930' => 'ath', 'AT1G07940' => 'ath', 'AT1G35550' => 'ath', 'AT5G60390' => 'ath', 'ATR0559G056' => 'atr', 'ATR0733G095' => 'atr', 'ATR0743G071' => 'atr', 'ATR0763G262' => 'atr', 'Atru.chr12.660' => 'acertr', 'Atru.chr12.667' => 'acertr', 'Atru.chr12.687' => 'acertr', 'Atru.chr2.2474' => 'acertr', 'Atru.chr3.3347' => 'acertr', 'Atru.chr3.3687' => 'acertr', 'Atru.chr8.2568' => 'acertr', 'AUR62020765' => 'cqu', 'AUR62020767' => 'cqu', 'AUR62020768' => 'cqu', 'AUR62020770' => 'cqu', 'AUR62020771' => 'cqu', 'AUR62020772' => 'cqu', 'AUR62027932' => 'cqu', 'AUR62027933' => 'cqu', 'AUR62027941' => 'cqu', 'AUR62027942' => 'cqu', 'AUR62027945' => 'cqu', 'AUR62027947' => 'cqu', 'AUR62044656' => 'cqu', 'BcaB01g04656' => 'bca', 'BcaB02g06698' => 'bca', 'BcaB02g10390' => 'bca', 'BcaB03g13360' => 'bca', 'BcaB05g22637' => 'bca', 'BcaB08g36338' => 'bca', 'BcaC02g11254' => 'bca', 'BcaC03g13977' => 'bca', 'BcaC04g19699' => 'bca', 'BcaC05g24712' => 'bca', 'BcaC07g41966' => 'bca', 'BcaC07g42511' => 'bca', 'BolC2t07270H' => 'bol', 'BolC2t07272H' => 'bol', 'BolC3t13749H' => 'bol', 'BolC4t23406H' => 'bol', 'BolC5t29361H' => 'bol', 'BolC8t47145H' => 'bol', 'BolC8t52553H' => 'bol', 'BolC8t52554H' => 'bol', 'BolC9t58176H' => 'bol', 'BraA02t05731Z' => 'bra', 'BraA02t05733Z' => 'bra', 'BraA03t10430Z' => 'bra', 'BraA05t20345Z' => 'bra', 'BraA06t23712Z' => 'bra', 'BraA08t35446Z' => 'bra', 'BraA09t41947Z' => 'bra', 'BraA09t41948Z' => 'bra', 'BraA10t43841Z' => 'bra', 'C02p11730' => 'bna', 'C02p11750' => 'bna', 'C03p12850' => 'bna', 'C04p18550' => 'bna', 'C05p06020' => 'bna', 'C08p50240' => 'bna', 'C08p50250' => 'bna', 'C09p53020' => 'bna', 'CAN.G1001.23' => 'can', 'CAN.G1355.1' => 'can', 'CAN.G137.10' => 'can', 'CAN.G137.11' => 'can', 'CAN.G224.6' => 'can', 'CAN.G224.7' => 'can', 'CAN.G224.9' => 'can', 'CAN.G309.12' => 'can', 'CAN.G356.6' => 'can', 'CAN.G4249.1' => 'can', 'CAN.G546.6' => 'can', 'CAN.G589.2' => 'can', 'CAN.G7.30' => 'can', 'CAN.G79.40' => 'can', 'CAN.G893.7' => 'can', 'CAN.G90.4' => 'can', 'CANSAT54G1706' => 'cansat', 'CANSAT56G1701' => 'cansat', 'CANSAT78G0668' => 'cansat', 'CARHR204750' => 'chi', 'CARHR274060' => 'chi', 'CARHR274080' => 'chi', 'Carub.0001s0726' => 'cru', 'Carub.0001s0727' => 'cru', 'Carub.0001s0728' => 'cru', 'Carub.0008s2110' => 'cru', 'Ca_04383_v3' => 'car', 'Ca_04385_v3' => 'car', 'Ca_09454_v3' => 'car', 'Ca_14560_v3' => 'car', 'Ca_16141_v3' => 'car', 'Ca_18262_v3' => 'car', 'Ca_25146_v3' => 'car', 'Ca_30818_v3' => 'car', 'CBR_g11889' => 'cbr', 'CBR_g19903' => 'cbr', 'CBR_g19904' => 'cbr', 'CBR_g19905' => 'cbr', 'CBR_g19907' => 'cbr', 'CBR_g19910' => 'cbr', 'CBR_g41262' => 'cbr', 'CBR_g5750' => 'cbr', 'Cc00_g21670' => 'ccan', 'Cc00_g27800' => 'ccan', 'Cc01_g11480' => 'ccan', 'Cc01_g11510' => 'ccan', 'Cc04_g09020' => 'ccan', 'CDE02G0499' => 'cde', 'CDE02G0666' => 'cde', 'CDE02G2407' => 'cde', 'CDE07G0139' => 'cde', 'CDE07G1241' => 'cde', 'CDE07G1615' => 'cde', 'CDE09G0519' => 'cde', 'CDE09G1212' => 'cde', 'CDE09G1265' => 'cde', 'CDE09G1318' => 'cde', 'Cfa011359' => 'cfa', 'Cfa014934' => 'cfa', 'Cfa014935' => 'cfa', 'Cfa021050' => 'cfa', 'Cfa026016' => 'cfa', 'Ciclev10028443m.g' => 'ccl', 'Ciclev10028445m.g' => 'ccl', 'Ciclev10028446m.g' => 'ccl', 'Ciclev10033471m.g' => 'ccl', 'CiPaw.01G275600' => 'cil', 'CiPaw.02G066000' => 'cil', 'CiPaw.02G175800' => 'cil', 'CiPaw.13G107700' => 'cil', 'CiPaw.13G107800' => 'cil', 'CiPaw.13G107900' => 'cil', 'ClCG02G020990' => 'cla', 'ClCG06G007880' => 'cla', 'ClCG09G020500' => 'cla', 'COL.COLO4_03667' => 'col', 'COL.COLO4_03668' => 'col', 'COL.COLO4_27068' => 'col', 'COL.COLO4_27070' => 'col', 'Cpa.g.sc53.37' => 'cpa', 'Cpa.g.sc53.40' => 'cpa', 'Cpa.g.sc53.41' => 'cpa', 'Cpa.g.sc81.67' => 'cpa', 'Cpa.g.sc81.68' => 'cpa', 'Cre06.g263450' => 'cre', 'Cre12.g498600' => 'cre', 'CsaV3_2G011610' => 'csa', 'CsaV3_5G025900' => 'csa', 'CsaV3_5G025920' => 'csa', 'CsaV3_5G025930' => 'csa', 'CsaV3_6G021670' => 'csa', 'CSS0013173' => 'camsi', 'CSS0015704' => 'camsi', 'CSS0025240' => 'camsi', 'CSS0025524' => 'camsi', 'CSS0033413' => 'camsi', 'CSS0037583' => 'camsi', 'DCAR_006050' => 'dca', 'DCAR_006052' => 'dca', 'DCAR_015308' => 'dca', 'DCAR_015309' => 'dca', 'DCAR_015310' => 'dca', 'DCAR_015560' => 'dca', 'DCAR_019132' => 'dca', 'DCAR_019133' => 'dca', 'Dinv00708' => 'din', 'Dinv03605' => 'din', 'Dinv03739' => 'din', 'Dinv10407' => 'din', 'Dinv11800' => 'din', 'Dinv11801' => 'din', 'Dinv15169' => 'din', 'Dinv27225' => 'din', 'Dinv31165' => 'din', 'Dinv32783' => 'din', 'Dinv35718' => 'din', 'Dinv37262' => 'din', 'Dinv38217' => 'din', 'Duzib093G1503' => 'dzi', 'Duzib106G1026' => 'dzi', 'Duzib106G1492' => 'dzi', 'Duzib114G0009' => 'dzi', 'Duzib114G0116' => 'dzi', 'Duzib128G0666' => 'dzi', 'Duzib128G1512' => 'dzi', 'Duzib128G1527' => 'dzi', 'Duzib150G1247' => 'dzi', 'Duzib168G0185' => 'dzi', 'Duzib170G0761' => 'dzi', 'ECA232G0733' => 'eca', 'ECA233G3190' => 'eca', 'ECA233G3656' => 'eca', 'ECA234G0745' => 'eca', 'ECA234G0952' => 'eca', 'ECA234G2050' => 'eca', 'ECA234G2322' => 'eca', 'ECA234G3520' => 'eca', 'ECA234G3599' => 'eca', 'ECA234G4478' => 'eca', 'ECA234G4757' => 'eca', 'ECA236G0209' => 'eca', 'ECA236G0520' => 'eca', 'ECA238G0055' => 'eca', 'ECA238G1119' => 'eca', 'ECA238G1121' => 'eca', 'ECA238G2677' => 'eca', 'ECA238G3050' => 'eca', 'ECA238G4001' => 'eca', 'ECA238G4313' => 'eca', 'ECA238G4621' => 'eca', 'ECA240G0012' => 'eca', 'ECA240G0062' => 'eca', 'ECA240G1116' => 'eca', 'ECA240G2582' => 'eca', 'ECA240G4271' => 'eca', 'ECA247G0764' => 'eca', 'ECA247G0928' => 'eca', 'ECA247G1882' => 'eca', 'EL10Ac2g03570' => 'bvu', 'EL10Ac2g03574' => 'bvu', 'EL10Ac2g03576' => 'bvu', 'EL10Ac2g03577' => 'bvu', 'Eucgr.B02473' => 'egr', 'Eucgr.G02807' => 'egr', 'Eucgr.J01112' => 'egr', 'Eucgr.J01121' => 'egr', 'FAN01G0393' => 'fan', 'FAN01G0817' => 'fan', 'FAN06G4610' => 'fan', 'FAN10G0360' => 'fan', 'FAN11G0482' => 'fan', 'FAN11G0764' => 'fan', 'FAN16G0102' => 'fan', 'FAN16G3705' => 'fan', 'FAN21G0613' => 'fan', 'FAN21G2297' => 'fan', 'FAN25G2681' => 'fan', 'FAN25G3476' => 'fan', 'FvH4_1g23805' => 'fve', 'FvH4_3g33060' => 'fve', 'FvH4_3g33150' => 'fve', 'FvH4_7g20050' => 'fve', 'Glyma.05G089000' => 'gma', 'Glyma.05G114900' => 'gma', 'Glyma.10G212900' => 'gma', 'Glyma.16G068000' => 'gma', 'Glyma.17G186600' => 'gma', 'Glyma.19G052400' => 'gma', 'Gohir.A01G109200' => 'ghi', 'Gohir.A01G216500' => 'ghi', 'Gohir.A04G076200' => 'ghi', 'Gohir.A04G076400' => 'ghi', 'Gohir.A04G076500' => 'ghi', 'Gohir.A05G344600' => 'ghi', 'Gohir.A05G345800' => 'ghi', 'Gohir.A06G178300' => 'ghi', 'Gohir.A07G116800' => 'ghi', 'Gohir.A10G207701' => 'ghi', 'Gohir.A12G076800' => 'ghi', 'Gohir.D01G096000' => 'ghi', 'Gohir.D01G205300' => 'ghi', 'Gohir.D04G083100' => 'ghi', 'Gohir.D04G084900' => 'ghi', 'Gohir.D04G115300' => 'ghi', 'Gohir.D04G115400' => 'ghi', 'Gohir.D04G115500' => 'ghi', 'Gohir.D06G174700' => 'ghi', 'Gohir.D07G121200' => 'ghi', 'Gohir.D10G215600' => 'ghi', 'Gohir.D10G215800' => 'ghi', 'Gohir.D12G075100' => 'ghi', 'Gorai.001G130700' => 'gra', 'Gorai.002G121500' => 'gra', 'Gorai.002G249600' => 'gra', 'Gorai.005G151200' => 'gra', 'Gorai.008G084000' => 'gra', 'Gorai.009G419900' => 'gra', 'Gorai.009G420000' => 'gra', 'Gorai.009G420100' => 'gra', 'Gorai.010G204400' => 'gra', 'Gorai.011G241200' => 'gra', 'Gorai.011G241400' => 'gra', 'Gorai.012G093800' => 'gra', 'Gorai.012G094600' => 'gra', 'GSVIVG01003246001' => 'vvi', 'GSVIVG01014488001' => 'vvi', 'GSVIVG01016317001' => 'vvi', 'GSVIVG01016318001' => 'vvi', 'GSVIVG01025147001' => 'vvi', 'GSVIVG01025638001' => 'vvi', 'HanXRQChr01g0027451' => 'han', 'HanXRQChr02g0056011' => 'han', 'HanXRQChr07g0197421' => 'han', 'HanXRQChr09g0246511' => 'han', 'HanXRQChr13g0404451' => 'han', 'HanXRQChr14g0453011' => 'han', 'HanXRQChr14g0454691' => 'han', 'Haze_11588' => 'cav', 'Haze_23905' => 'cav', 'Haze_26238' => 'cav', 'Haze_27172' => 'cav', 'Haze_27464' => 'cav', 'Hma1.2p1_0111F.1_g053950' => 'hma', 'Hma1.2p1_0361F.1_g135980' => 'hma', 'Hma1.2p1_0453F.1_g156025' => 'hma', 'Hma1.2p1_0568F.1_g180180' => 'hma', 'Hma1.2p1_2080F.1_g313500' => 'hma', 'HPP92_012054' => 'vpl', 'HPP92_013083' => 'vpl', 'HPP92_013090' => 'vpl', 'HPP92_013894' => 'vpl', 'HPP92_016809' => 'vpl', 'HPP92_016816' => 'vpl', 'Hund19338' => 'sun', 'Hund19340' => 'sun', 'Hund19341' => 'sun', 'Hund22506' => 'sun', 'Hund22507' => 'sun', 'Hund22510' => 'sun', 'Hund22511' => 'sun', 'Hund22580' => 'sun', 'Lalb_Chr02g0141951' => 'lal', 'Lalb_Chr02g0158111' => 'lal', 'Lalb_Chr06g0162191' => 'lal', 'Lalb_Chr06g0174461' => 'lal', 'Lalb_Chr14g0362911' => 'lal', 'Lalb_Chr19g0129561' => 'lal', 'Lalb_Chr21g0317711' => 'lal', 'Lalb_Chr22g0360661' => 'lal', 'Lalb_Chr22g0360671' => 'lal', 'Lalb_Chr24g0403471' => 'lal', 'Lj1A186T34' => 'lonja', 'Lj1A920T50' => 'lonja', 'Lj1A920T51' => 'lonja', 'Lj1A921G30' => 'lonja', 'Lj1A921T29' => 'lonja', 'Lj1g0010515' => 'lja', 'Lj1g0026760' => 'lja', 'Lj2C1035T3' => 'lonja', 'Lj2g0002755' => 'lja', 'Lj2g0008477' => 'lja', 'Lj5g0021073' => 'lja', 'Lj5g0021169' => 'lja', 'Lj8C97T2' => 'lonja', 'Lsat_1_v5_gn_1_53981' => 'lsa', 'Lsat_1_v5_gn_2_109480' => 'lsa', 'Lsat_1_v5_gn_2_97861' => 'lsa', 'Lsat_1_v5_gn_9_67180' => 'lsa', 'Manes.03G146700' => 'mes', 'Manes.03G146900' => 'mes', 'Manes.03G147000' => 'mes', 'Manes.15G054700' => 'mes', 'Manes.15G054800' => 'mes', 'Manes.15G054900' => 'mes', 'Mapoly0002s0240' => 'mpo', 'Mapoly0022s0170' => 'mpo', 'Mapoly0024s0116' => 'mpo', 'Mapoly0038s0022' => 'mpo', 'Mapoly0038s0023' => 'mpo', 'Mapoly0052s0109' => 'mpo', 'Mapoly0052s0110' => 'mpo', 'Mapoly0104s0043' => 'mpo', 'Mapoly0145s0014' => 'mpo', 'Mapoly0145s0015' => 'mpo', 'Mapoly0145s0016' => 'mpo', 'Mapoly0145s0017' => 'mpo', 'Mapoly0982s0001' => 'mpo', 'MBI02_g36660_MAGBIO' => 'mbi', 'MBI05_g11573_MAGBIO' => 'mbi', 'MBI05_g34473_MAGBIO' => 'mbi', 'MBI07_g38933_MAGBIO' => 'mbi', 'MBI12_g38354_MAGBIO' => 'mbi', 'MBI14_g29301_MAGBIO' => 'mbi', 'MCO16G404' => 'mco', 'MCO16G599' => 'mco', 'MD03G1103900' => 'mdo', 'MD03G1104900' => 'mdo', 'MD04G1011000' => 'mdo', 'MD04G1011300' => 'mdo', 'MD04G1011900' => 'mdo', 'MD11G1130600' => 'mdo', 'MD11G1131300' => 'mdo', 'Medtr1g013680' => 'mtr', 'Medtr1g024165' => 'mtr', 'Medtr1g024175' => 'mtr', 'Medtr1g085410' => 'mtr', 'Medtr1g089520' => 'mtr', 'Medtr1g095650' => 'mtr', 'Medtr1g095703' => 'mtr', 'Medtr1g101870' => 'mtr', 'Medtr1g101880' => 'mtr', 'Medtr1g112460' => 'mtr', 'Medtr1g495705' => 'mtr', 'Medtr1g495735' => 'mtr', 'Medtr2g037420' => 'mtr', 'Medtr2g080210' => 'mtr', 'Medtr2g082665' => 'mtr', 'Medtr2g082730' => 'mtr', 'Medtr4g014810' => 'mtr', 'Medtr4g054970' => 'mtr', 'Medtr5g037350' => 'mtr', 'Medtr6g021800' => 'mtr', 'Medtr6g021805' => 'mtr', 'Medtr8g008740' => 'mtr', 'Medtr8g013910' => 'mtr', 'Medtr8g014590' => 'mtr', 'Medtr8g014950' => 'mtr', 'MELO3C002878.2' => 'cme', 'MELO3C020441.2' => 'cme', 'MELO3C025511.2' => 'cme', 'MELO3C025753.2' => 'cme', 'Migut.D02187' => 'egut', 'Migut.D02188' => 'egut', 'Migut.D02190' => 'egut', 'Migut.D02191' => 'egut', 'Migut.D02193' => 'egut', 'Migut.N02618' => 'egut', 'MSTRG.18643' => 'ama', 'MSTRG.18644' => 'ama', 'MSTRG.21139' => 'ama', 'MSTRG.21140' => 'ama', 'Nitab4.5_0000022g0030' => 'nta', 'Nitab4.5_0000022g0050' => 'nta', 'Nitab4.5_0000022g0070' => 'nta', 'Nitab4.5_0000022g0100' => 'nta', 'Nitab4.5_0001802g0030' => 'nta', 'Nitab4.5_0001830g0010' => 'nta', 'Nitab4.5_0002129g0030' => 'nta', 'Nitab4.5_0003090g0010' => 'nta', 'Nitab4.5_0003127g0020' => 'nta', 'Nitab4.5_0012305g0010' => 'nta', 'Nn2g10687' => 'nnu', 'Nn2g13014' => 'nnu', 'Oeu002418.1' => 'oeu', 'Oeu005904.1' => 'oeu', 'Oeu031698.1' => 'oeu', 'Oeu037229.1' => 'oeu', 'Oeu044357.1' => 'oeu', 'Oeu049037.1' => 'oeu', 'Oeu050460.1' => 'oeu', 'Oeu059104.1' => 'oeu', 'Os03g0177400' => 'osa', 'Os03g0177500' => 'osa', 'Os03g0178000' => 'osa', 'Peaxi162Scf00351g00321' => 'pax', 'Peaxi162Scf00351g00412' => 'pax', 'Peaxi162Scf00389g00935' => 'pax', 'Peaxi162Scf00389g00936' => 'pax', 'PGR044G0520' => 'pgr', 'PGR044G0524' => 'pgr', 'PGR044G0635' => 'pgr', 'PGR044G1091' => 'pgr', 'PGR142G2494' => 'pgr', 'PGR142G3227' => 'pgr', 'PGR142G3658' => 'pgr', 'PGSC0003DMG400008117' => 'stu', 'PGSC0003DMG400019677' => 'stu', 'PGSC0003DMG400020772' => 'stu', 'PGSC0003DMG400020775' => 'stu', 'PGSC0003DMG400023270' => 'stu', 'PGSC0003DMG400023272' => 'stu', 'PGSC0003DMG400037830' => 'stu', 'Phvul.004G060000' => 'pvu', 'Phvul.004G075100' => 'pvu', 'Phvul.007G092500' => 'pvu', 'Potri.006G130900' => 'ptr', 'Potri.008G042500' => 'ptr', 'Potri.008G042700' => 'ptr', 'Potri.008G043100' => 'ptr', 'Potri.010G218600' => 'ptr', 'Potri.010G218700' => 'ptr', 'Potri.010G218800' => 'ptr', 'Potri.010G219500' => 'ptr', 'Potri.016G086450' => 'ptr', 'Potri.016G086500' => 'ptr', 'Pp3c1_23670' => 'ppa', 'Pp3c1_23750' => 'ppa', 'Pp3c1_23850' => 'ppa', 'Pp3c1_23900' => 'ppa', 'Pp3c1_23920' => 'ppa', 'Pp3c2_10310' => 'ppa', 'Pp3c2_6160' => 'ppa', 'Pp3c2_6650' => 'ppa', 'Pp3c2_6690' => 'ppa', 'Pp3c2_6770' => 'ppa', 'Pp3c5_10430' => 'ppa', 'PRCOL_00001218' => 'pco', 'PRCOL_00002785' => 'pco', 'Prupe.1G010400' => 'ppe', 'Prupe.2G217300' => 'ppe', 'Prupe.6G095200' => 'ppe', 'Prupe.6G095700' => 'ppe', 'Psat0s2152g0040' => 'psa', 'Psat0s3458g0040' => 'psa', 'Psat1g061640' => 'psa', 'Psat1g082560' => 'psa', 'Psat1g082600' => 'psa', 'Psat3g030080' => 'psa', 'Psat5g186400' => 'psa', 'Psat6g156840' => 'psa', 'Psat6g157280' => 'psa', 'Psat6g182960' => 'psa', 'Psat6g184960' => 'psa', 'Psat6g200800' => 'psa', 'Psat7g246880' => 'psa', 'Psat7g247040' => 'psa', 'Psat7g250560' => 'psa', 'PSO022G0001' => 'pso', 'PSO063G1568' => 'pso', 'PSO063G4562' => 'pso', 'PSO170G2125' => 'pso', 'PSO228G0001' => 'pso', 'PSO328G0001' => 'pso', 'PSO339G0079' => 'pso', 'PSO339G1043' => 'pso', 'PSO339G3389' => 'pso', 'PSO339G3486' => 'pso', 'PSO339G4437' => 'pso', 'PSO339G6166' => 'pso', 'PSO372G0001' => 'pso', 'PSO384G0501' => 'pso', 'PSO384G3091' => 'pso', 'PSO384G4995' => 'pso', 'PSO404G0001' => 'pso', 'PSO438G0001' => 'pso', 'PSO566G0171' => 'pso', 'PSO782G4321' => 'pso', 'PSO832G2553' => 'pso', 'QL01p037319' => 'qlo', 'QL04p094522' => 'qlo', 'QL07p045186' => 'qlo', 'QL08p056637' => 'qlo', 'QL08p056663' => 'qlo', 'RcHm_v2.0_Chr1g0345021' => 'rch', 'RcHm_v2.0_Chr1g0364011' => 'rch', 'RcHm_v2.0_Chr4g0414681' => 'rch', 'RcHm_v2.0_Chr5g0060421' => 'rch', 'RcHm_v2.0_Chr5g0060471' => 'rch', 'Rhsim01G0219100' => 'rsi', 'Rhsim02G0059100' => 'rsi', 'Rhsim02G0059200' => 'rsi', 'Rhsim02G0059400' => 'rsi', 'Rhsim02G0059600' => 'rsi', 'Rhsim04G0150200' => 'rsi', 'Sabra06G0102800' => 'sbr', 'Sabra08G0029300' => 'sbr', 'Sabra08G0029400' => 'sbr', 'Sabra10G0169100' => 'sbr', 'Sabra10G0169400' => 'sbr', 'Sabra16G0092800' => 'sbr', 'SalBow2G0761' => 'sbo', 'SalBow3G0447' => 'sbo', 'SalBow3G1237' => 'sbo', 'SalBow3G1432' => 'sbo', 'SalBow3G1552' => 'sbo', 'SalBow3G2432' => 'sbo', 'SalBow8G1565' => 'sbo', 'SalBow8G3566' => 'sbo', 'Sc15g0001650' => 'sci', 'Sc20g0002150' => 'sci', 'Sc20g0002210' => 'sci', 'Sc20g0002220' => 'sci', 'Sed0002891' => 'sed', 'Sed0019005' => 'sed', 'Sed0019843' => 'sed', 'Sed0025247' => 'sed', 'Sed0025486' => 'sed', 'Sed0026565' => 'sed', 'SEGI_02338' => 'sgi', 'SEGI_11454' => 'sgi', 'SGA_v2.0_scaffold2G00909' => 'sas', 'SGA_v2.0_scaffold2G00925' => 'sas', 'SGA_v2.0_scaffold60G21034' => 'sas', 'SGA_v2.0_scaffold61G21171' => 'sas', 'SGA_v2.0_scaffold80G25750' => 'sas', 'SGA_v2.0_scaffold97G29177' => 'sas', 'SHI04937' => 'shi', 'SHI07844' => 'shi', 'SHI07845' => 'shi', 'SHI08784' => 'shi', 'SHI10604' => 'shi', 'SHI19009' => 'shi', 'SHI19531' => 'shi', 'SHI22209' => 'shi', 'SHI23243' => 'shi', 'SHI25175' => 'shi', 'SHI27863' => 'shi', 'SHI28961' => 'shi', 'SHI30203' => 'shi', 'SMO115G0092' => 'smo', 'SMO119G0284' => 'smo', 'SMO119G0388' => 'smo', 'Solyc06g005060.3' => 'sly', 'Solyc06g009960.3' => 'sly', 'Solyc06g009970.3' => 'sly', 'Solyc11g069097.1' => 'sly', 'Solyc11g069700.2' => 'sly', 'Solyc11g150146.1' => 'sly', 'Sopen06g001040' => 'spe', 'Sopen06g004580' => 'spe', 'Sopen06g004650' => 'spe', 'Sopen11g027830' => 'spe', 'Sopen11g028580' => 'spe', 'Sp1g06600' => 'spa', 'Sp2g05140' => 'spa', 'TAR369G1049' => 'tar', 'TAR376G0511' => 'tar', 'TAR623G1230' => 'tar', 'TAR628G1395' => 'tar', 'TAR633G1484' => 'tar', 'TAR633G1875' => 'tar', 'TAR636G2886' => 'tar', 'THA.LOC104800469' => 'tha', 'THA.LOC104800612' => 'tha', 'THA.LOC104810843' => 'tha', 'THA.LOC104814836' => 'tha', 'THA.LOC104815750' => 'tha', 'THA.LOC104815751' => 'tha', 'THA.LOC104826360' => 'tha', 'THA.LOC104826361' => 'tha', 'Thecc.05G055000' => 'tca', 'Thecc.09G259400' => 'tca', 'Thecc.09G259700' => 'tca', 'Thecc.10G069100' => 'tca', 'Thecc.10G069400' => 'tca', 'Thhalv10007618m.g' => 'esa', 'Thhalv10007619m.g' => 'esa', 'Thhalv10007620m.g' => 'esa', 'Thhalv10013526m.g' => 'esa', 'TPR.G15718' => 'tpr', 'TPR.G1766' => 'tpr', 'TPR.G1772' => 'tpr', 'TPR.G21' => 'tpr', 'TPR.G21632' => 'tpr', 'TPR.G21641' => 'tpr', 'TPR.G22349' => 'tpr', 'TPR.G22680' => 'tpr', 'TPR.G24200' => 'tpr', 'TPR.G34948' => 'tpr', 'TPR.G5210' => 'tpr', 'TPR.G8091' => 'tpr', 'TWI15G0934' => 'twi', 'TWI31G0877' => 'twi', 'TWI31G0916' => 'twi', 'TWI38G0671' => 'twi', 'TWI63G0817' => 'twi', 'TWI63G1429' => 'twi', 'TWI75G0686' => 'twi', 'TWI75G1062' => 'twi', 'TWI77G0147' => 'twi', 'TWI79G0702' => 'twi', 'unitig_0.g1038' => 'ugi', 'unitig_0.g1039' => 'ugi', 'unitig_0.g1041' => 'ugi', 'unitig_0.g1043' => 'ugi', 'unitig_899.g14908' => 'ugi', 'vmacro03175' => 'vma', 'vmacro08706' => 'vma', 'vmacro14455' => 'vma', 'vmacro14912' => 'vma', 'vmacro15547' => 'vma', 'vmacro20987' => 'vma', 'VMungo0464G1419' => 'vmu', 'VMungo0464G2097' => 'vmu', 'Zm00001eb106920' => 'zma', 'Zm00001eb276860' => 'zma', 'Zm00001eb285210' => 'zma', 'Zm00001eb285220' => 'zma', 'Zm00001eb285230' => 'zma', 'Zm00001eb285260' => 'zma', 'Zm00001eb285450' => 'zma', 'Zm00001eb324270' => 'zma', 'Zm00001eb346210' => 'zma', 'Zm00001eb346230' => 'zma', 'Zm00001eb346360' => 'zma', 'Zm00001eb346370' => 'zma', 'Zm00001eb385900' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'ORTHO05D000632' $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000632' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'ORTHO05D000632' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'ORTHO05D000632' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151