Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001666', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001666' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001666' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001666' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001666' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001666', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001666' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001666' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001666' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001666' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001666', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001666' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001666' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001666' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001666' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001666', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001666' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001666', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '388', 'num_species' => '1' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' ) ), 'genes' => array( 'Oeu000001.1' => 'oeu', 'Oeu000068.1' => 'oeu', 'Oeu000720.1' => 'oeu', 'Oeu000857.1' => 'oeu', 'Oeu000858.1' => 'oeu', 'Oeu000933.1' => 'oeu', 'Oeu000940.1' => 'oeu', 'Oeu000942.1' => 'oeu', 'Oeu000944.1' => 'oeu', 'Oeu001229.1' => 'oeu', 'Oeu001335.1' => 'oeu', 'Oeu001545.1' => 'oeu', 'Oeu001604.1' => 'oeu', 'Oeu002042.1' => 'oeu', 'Oeu002564.1' => 'oeu', 'Oeu002585.1' => 'oeu', 'Oeu002587.1' => 'oeu', 'Oeu002751.1' => 'oeu', 'Oeu002880.1' => 'oeu', 'Oeu003030.1' => 'oeu', 'Oeu003246.1' => 'oeu', 'Oeu003247.1' => 'oeu', 'Oeu003250.1' => 'oeu', 'Oeu003312.1' => 'oeu', 'Oeu003372.1' => 'oeu', 'Oeu003509.1' => 'oeu', 'Oeu003602.1' => 'oeu', 'Oeu003605.1' => 'oeu', 'Oeu003609.1' => 'oeu', 'Oeu003767.1' => 'oeu', 'Oeu003772.1' => 'oeu', 'Oeu003773.1' => 'oeu', 'Oeu003885.1' => 'oeu', 'Oeu003897.1' => 'oeu', 'Oeu004749.1' => 'oeu', 'Oeu005135.1' => 'oeu', 'Oeu005236.1' => 'oeu', 'Oeu005245.1' => 'oeu', 'Oeu005249.1' => 'oeu', 'Oeu005251.1' => 'oeu', 'Oeu005255.1' => 'oeu', 'Oeu005263.1' => 'oeu', 'Oeu005560.1' => 'oeu', 'Oeu005568.1' => 'oeu', 'Oeu005625.1' => 'oeu', 'Oeu005660.1' => 'oeu', 'Oeu005754.1' => 'oeu', 'Oeu006252.1' => 'oeu', 'Oeu006479.1' => 'oeu', 'Oeu006625.1' => 'oeu', 'Oeu006628.1' => 'oeu', 'Oeu006666.1' => 'oeu', 'Oeu006828.1' => 'oeu', 'Oeu006835.1' => 'oeu', 'Oeu006839.1' => 'oeu', 'Oeu006938.1' => 'oeu', 'Oeu007272.1' => 'oeu', 'Oeu007921.1' => 'oeu', 'Oeu008069.1' => 'oeu', 'Oeu008510.1' => 'oeu', 'Oeu008513.1' => 'oeu', 'Oeu008515.1' => 'oeu', 'Oeu008751.1' => 'oeu', 'Oeu008828.1' => 'oeu', 'Oeu008991.1' => 'oeu', 'Oeu009010.1' => 'oeu', 'Oeu009143.1' => 'oeu', 'Oeu009197.1' => 'oeu', 'Oeu009336.1' => 'oeu', 'Oeu009344.1' => 'oeu', 'Oeu009363.1' => 'oeu', 'Oeu009465.1' => 'oeu', 'Oeu009596.1' => 'oeu', 'Oeu009610.1' => 'oeu', 'Oeu009648.1' => 'oeu', 'Oeu010276.1' => 'oeu', 'Oeu010865.1' => 'oeu', 'Oeu010877.1' => 'oeu', 'Oeu010919.1' => 'oeu', 'Oeu011031.1' => 'oeu', 'Oeu011187.1' => 'oeu', 'Oeu011743.1' => 'oeu', 'Oeu012129.1' => 'oeu', 'Oeu012785.1' => 'oeu', 'Oeu012796.1' => 'oeu', 'Oeu012903.1' => 'oeu', 'Oeu013205.1' => 'oeu', 'Oeu013550.1' => 'oeu', 'Oeu013678.1' => 'oeu', 'Oeu013686.1' => 'oeu', 'Oeu014120.1' => 'oeu', 'Oeu014448.1' => 'oeu', 'Oeu014541.1' => 'oeu', 'Oeu014555.1' => 'oeu', 'Oeu015065.1' => 'oeu', 'Oeu015743.1' => 'oeu', 'Oeu015873.1' => 'oeu', 'Oeu015956.1' => 'oeu', 'Oeu016073.1' => 'oeu', 'Oeu016721.1' => 'oeu', 'Oeu016723.1' => 'oeu', 'Oeu016724.1' => 'oeu', 'Oeu016859.1' => 'oeu', 'Oeu016920.1' => 'oeu', 'Oeu016944.1' => 'oeu', 'Oeu016952.1' => 'oeu', 'Oeu016953.1' => 'oeu', 'Oeu016961.1' => 'oeu', 'Oeu017131.1' => 'oeu', 'Oeu017162.1' => 'oeu', 'Oeu017427.1' => 'oeu', 'Oeu017535.1' => 'oeu', 'Oeu017544.1' => 'oeu', 'Oeu017545.1' => 'oeu', 'Oeu017549.1' => 'oeu', 'Oeu017551.1' => 'oeu', 'Oeu017553.1' => 'oeu', 'Oeu017555.1' => 'oeu', 'Oeu017577.1' => 'oeu', 'Oeu017722.1' => 'oeu', 'Oeu018091.1' => 'oeu', 'Oeu018093.1' => 'oeu', 'Oeu018096.1' => 'oeu', 'Oeu018098.1' => 'oeu', 'Oeu018109.1' => 'oeu', 'Oeu018843.1' => 'oeu', 'Oeu018849.1' => 'oeu', 'Oeu018853.1' => 'oeu', 'Oeu018854.1' => 'oeu', 'Oeu018860.1' => 'oeu', 'Oeu018878.1' => 'oeu', 'Oeu018880.1' => 'oeu', 'Oeu018887.1' => 'oeu', 'Oeu018889.1' => 'oeu', 'Oeu019128.1' => 'oeu', 'Oeu019318.1' => 'oeu', 'Oeu019591.1' => 'oeu', 'Oeu020215.1' => 'oeu', 'Oeu020245.1' => 'oeu', 'Oeu020277.1' => 'oeu', 'Oeu020328.1' => 'oeu', 'Oeu020330.1' => 'oeu', 'Oeu020336.1' => 'oeu', 'Oeu020337.1' => 'oeu', 'Oeu020572.1' => 'oeu', 'Oeu020842.1' => 'oeu', 'Oeu020995.1' => 'oeu', 'Oeu021038.1' => 'oeu', 'Oeu021489.1' => 'oeu', 'Oeu021997.1' => 'oeu', 'Oeu022537.1' => 'oeu', 'Oeu022570.1' => 'oeu', 'Oeu022645.1' => 'oeu', 'Oeu022646.1' => 'oeu', 'Oeu022656.1' => 'oeu', 'Oeu022660.1' => 'oeu', 'Oeu022667.1' => 'oeu', 'Oeu022810.1' => 'oeu', 'Oeu022963.1' => 'oeu', 'Oeu023042.1' => 'oeu', 'Oeu023049.1' => 'oeu', 'Oeu023428.1' => 'oeu', 'Oeu023558.1' => 'oeu', 'Oeu024246.1' => 'oeu', 'Oeu024247.1' => 'oeu', 'Oeu024276.1' => 'oeu', 'Oeu024278.1' => 'oeu', 'Oeu025288.1' => 'oeu', 'Oeu026022.1' => 'oeu', 'Oeu026284.1' => 'oeu', 'Oeu026448.1' => 'oeu', 'Oeu026687.1' => 'oeu', 'Oeu026753.1' => 'oeu', 'Oeu027668.1' => 'oeu', 'Oeu028006.1' => 'oeu', 'Oeu028297.1' => 'oeu', 'Oeu028436.1' => 'oeu', 'Oeu028519.1' => 'oeu', 'Oeu028673.1' => 'oeu', 'Oeu029321.1' => 'oeu', 'Oeu029576.1' => 'oeu', 'Oeu029579.1' => 'oeu', 'Oeu029757.1' => 'oeu', 'Oeu029981.1' => 'oeu', 'Oeu030197.1' => 'oeu', 'Oeu030996.1' => 'oeu', 'Oeu031015.1' => 'oeu', 'Oeu031062.1' => 'oeu', 'Oeu031530.1' => 'oeu', 'Oeu031531.1' => 'oeu', 'Oeu031559.1' => 'oeu', 'Oeu031560.1' => 'oeu', 'Oeu031664.1' => 'oeu', 'Oeu031665.1' => 'oeu', 'Oeu031724.1' => 'oeu', 'Oeu031748.1' => 'oeu', 'Oeu031847.1' => 'oeu', 'Oeu032205.1' => 'oeu', 'Oeu032218.1' => 'oeu', 'Oeu032550.1' => 'oeu', 'Oeu032708.1' => 'oeu', 'Oeu032792.1' => 'oeu', 'Oeu033113.1' => 'oeu', 'Oeu033121.1' => 'oeu', 'Oeu033396.1' => 'oeu', 'Oeu033544.1' => 'oeu', 'Oeu033547.1' => 'oeu', 'Oeu033633.1' => 'oeu', 'Oeu033960.1' => 'oeu', 'Oeu034248.1' => 'oeu', 'Oeu034537.1' => 'oeu', 'Oeu034643.1' => 'oeu', 'Oeu034666.1' => 'oeu', 'Oeu034937.1' => 'oeu', 'Oeu034940.1' => 'oeu', 'Oeu034950.1' => 'oeu', 'Oeu035074.1' => 'oeu', 'Oeu035076.1' => 'oeu', 'Oeu035078.1' => 'oeu', 'Oeu035082.1' => 'oeu', 'Oeu035194.1' => 'oeu', 'Oeu035755.1' => 'oeu', 'Oeu036292.1' => 'oeu', 'Oeu036688.1' => 'oeu', 'Oeu037000.1' => 'oeu', 'Oeu037014.1' => 'oeu', 'Oeu037018.1' => 'oeu', 'Oeu037531.1' => 'oeu', 'Oeu037580.1' => 'oeu', 'Oeu038106.1' => 'oeu', 'Oeu038327.1' => 'oeu', 'Oeu038501.1' => 'oeu', 'Oeu038514.1' => 'oeu', 'Oeu038519.1' => 'oeu', 'Oeu038520.1' => 'oeu', 'Oeu039162.1' => 'oeu', 'Oeu039165.1' => 'oeu', 'Oeu039168.1' => 'oeu', 'Oeu039171.1' => 'oeu', 'Oeu039186.1' => 'oeu', 'Oeu039323.1' => 'oeu', 'Oeu040005.1' => 'oeu', 'Oeu040184.1' => 'oeu', 'Oeu040295.1' => 'oeu', 'Oeu040319.1' => 'oeu', 'Oeu040629.1' => 'oeu', 'Oeu040731.1' => 'oeu', 'Oeu040739.1' => 'oeu', 'Oeu040769.1' => 'oeu', 'Oeu041419.1' => 'oeu', 'Oeu042006.1' => 'oeu', 'Oeu042088.1' => 'oeu', 'Oeu042466.1' => 'oeu', 'Oeu042608.1' => 'oeu', 'Oeu042631.1' => 'oeu', 'Oeu042689.1' => 'oeu', 'Oeu042995.1' => 'oeu', 'Oeu043251.1' => 'oeu', 'Oeu043256.1' => 'oeu', 'Oeu043258.1' => 'oeu', 'Oeu043259.1' => 'oeu', 'Oeu043350.1' => 'oeu', 'Oeu043384.1' => 'oeu', 'Oeu043638.1' => 'oeu', 'Oeu043670.1' => 'oeu', 'Oeu044114.1' => 'oeu', 'Oeu044251.1' => 'oeu', 'Oeu044266.1' => 'oeu', 'Oeu044293.1' => 'oeu', 'Oeu044572.1' => 'oeu', 'Oeu044585.1' => 'oeu', 'Oeu045283.1' => 'oeu', 'Oeu045286.1' => 'oeu', 'Oeu045589.1' => 'oeu', 'Oeu045590.1' => 'oeu', 'Oeu045593.1' => 'oeu', 'Oeu045595.1' => 'oeu', 'Oeu045596.1' => 'oeu', 'Oeu046343.1' => 'oeu', 'Oeu046346.1' => 'oeu', 'Oeu046347.1' => 'oeu', 'Oeu047061.1' => 'oeu', 'Oeu047133.1' => 'oeu', 'Oeu047628.1' => 'oeu', 'Oeu047638.1' => 'oeu', 'Oeu047713.1' => 'oeu', 'Oeu048047.1' => 'oeu', 'Oeu048365.1' => 'oeu', 'Oeu048531.1' => 'oeu', 'Oeu049452.1' => 'oeu', 'Oeu049590.1' => 'oeu', 'Oeu049610.1' => 'oeu', 'Oeu049615.1' => 'oeu', 'Oeu049776.1' => 'oeu', 'Oeu049884.1' => 'oeu', 'Oeu050052.1' => 'oeu', 'Oeu050147.1' => 'oeu', 'Oeu050215.1' => 'oeu', 'Oeu050960.1' => 'oeu', 'Oeu051039.1' => 'oeu', 'Oeu051350.1' => 'oeu', 'Oeu051354.1' => 'oeu', 'Oeu051355.1' => 'oeu', 'Oeu051359.1' => 'oeu', 'Oeu051362.1' => 'oeu', 'Oeu051366.1' => 'oeu', 'Oeu051369.1' => 'oeu', 'Oeu051458.1' => 'oeu', 'Oeu051527.1' => 'oeu', 'Oeu051551.1' => 'oeu', 'Oeu051729.1' => 'oeu', 'Oeu051734.1' => 'oeu', 'Oeu051751.1' => 'oeu', 'Oeu051945.1' => 'oeu', 'Oeu051946.1' => 'oeu', 'Oeu052074.1' => 'oeu', 'Oeu052259.1' => 'oeu', 'Oeu052355.1' => 'oeu', 'Oeu052429.1' => 'oeu', 'Oeu052435.1' => 'oeu', 'Oeu052547.1' => 'oeu', 'Oeu053027.1' => 'oeu', 'Oeu053333.1' => 'oeu', 'Oeu053338.1' => 'oeu', 'Oeu053347.1' => 'oeu', 'Oeu054290.1' => 'oeu', 'Oeu054407.1' => 'oeu', 'Oeu054444.1' => 'oeu', 'Oeu054447.1' => 'oeu', 'Oeu054448.1' => 'oeu', 'Oeu054451.1' => 'oeu', 'Oeu054453.1' => 'oeu', 'Oeu054457.1' => 'oeu', 'Oeu054461.1' => 'oeu', 'Oeu054847.1' => 'oeu', 'Oeu054980.1' => 'oeu', 'Oeu055510.1' => 'oeu', 'Oeu055729.1' => 'oeu', 'Oeu055903.1' => 'oeu', 'Oeu056041.1' => 'oeu', 'Oeu056127.1' => 'oeu', 'Oeu056556.1' => 'oeu', 'Oeu057420.1' => 'oeu', 'Oeu057432.1' => 'oeu', 'Oeu057438.1' => 'oeu', 'Oeu057441.1' => 'oeu', 'Oeu057471.1' => 'oeu', 'Oeu057962.1' => 'oeu', 'Oeu058548.1' => 'oeu', 'Oeu058698.1' => 'oeu', 'Oeu058985.1' => 'oeu', 'Oeu059031.1' => 'oeu', 'Oeu059076.1' => 'oeu', 'Oeu059248.1' => 'oeu', 'Oeu059420.1' => 'oeu', 'Oeu059595.1' => 'oeu', 'Oeu059633.1' => 'oeu', 'Oeu059637.1' => 'oeu', 'Oeu059640.1' => 'oeu', 'Oeu059821.1' => 'oeu', 'Oeu059883.1' => 'oeu', 'Oeu060011.1' => 'oeu', 'Oeu060013.1' => 'oeu', 'Oeu060575.1' => 'oeu', 'Oeu060853.1' => 'oeu', 'Oeu060874.1' => 'oeu', 'Oeu061318.1' => 'oeu', 'Oeu061546.1' => 'oeu', 'Oeu061673.1' => 'oeu', 'Oeu061678.1' => 'oeu', 'Oeu061748.1' => 'oeu', 'Oeu061812.1' => 'oeu', 'Oeu061943.1' => 'oeu', 'Oeu061947.1' => 'oeu', 'Oeu061949.1' => 'oeu', 'Oeu061951.1' => 'oeu', 'Oeu062024.1' => 'oeu', 'Oeu062628.1' => 'oeu', 'Oeu062825.1' => 'oeu', 'Oeu062874.1' => 'oeu', 'Oeu062875.1' => 'oeu', 'Oeu063853.1' => 'oeu', 'Oeu064366.1' => 'oeu', 'Oeu064443.1' => 'oeu', 'Oeu064445.1' => 'oeu', 'Oeu064449.1' => 'oeu', 'Oeu064544.1' => 'oeu', 'Oeu064756.1' => 'oeu' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001666' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001666' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001666' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001666' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151