Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001113', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001113' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001113' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001113' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001113' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 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'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001113', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001113' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001113' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001113' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001113' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001113', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001113' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001113' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001113' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001113' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001113', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001113' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001113', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '550', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' ) ), 'genes' => array( 'A02p01050' => 'bna', 'A02p09050' => 'bna', 'A05p01050' => 'bna', 'A05p01060' => 'bna', 'A10p13820' => 'bna', 'A10p13830' => 'bna', 'Aa31LG1G28130' => 'aar', 'Aa31LG3G15660' => 'aar', 'Aa31LG5G20720' => 'aar', 'Aa31LG5G20730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.306' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.313' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.327' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.328' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.332' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.344' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.347' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5611' => 'aag', 'Actinidia13320' => 'ach', 'Actinidia28090' => 'ach', 'Ah.05g179020' => 'amhyb', 'AL1G46450' => 'aly', 'AL3G38410' => 'aly', 'AL4G46210' => 'aly', 'AL4G46220' => 'aly', 'AL4G46230' => 'aly', 'AL6G22210' => 'aly', 'AL8G32230' => 'aly', 'AL8G32250' => 'aly', 'AL994U10010' => 'aly', 'AL994U10020' => 'aly', 'Aqoxy2G00361' => 'aox', 'Aqoxy7G03865' => 'aox', 'arahy.Tifrunner.gnm1.ann1.17208D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1X72NK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DGN9W3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2FLC9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GE1SV7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GF4SN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JBF48E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0FR8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UH55RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MA8U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEZH97' => 'arhy', 'AT1G32300' => 'ath', 'AT2G46740' => 'ath', 'AT2G46750' => 'ath', 'AT2G46760' => 'ath', 'AT5G11540' => 'ath', 'AT5G56470' => 'ath', 'AT5G56490' => 'ath', 'ATR0315G025' => 'atr', 'ATR0579G023' => 'atr', 'ATR0796G110' => 'atr', 'ATR0796G122' => 'atr', 'Atru.chr5.755' => 'acertr', 'Atru.chr7.2137' => 'acertr', 'AUR62002621' => 'cqu', 'AUR62002622' => 'cqu', 'AUR62004553' => 'cqu', 'AUR62009308' => 'cqu', 'AUR62022667' => 'cqu', 'AUR62030037' => 'cqu', 'AUR62030038' => 'cqu', 'AUR62041722' => 'cqu', 'AUR62043519' => 'cqu', 'BcaB05g22275' => 'bca', 'BcaB08g37046' => 'bca', 'BcaB08g37048' => 'bca', 'BcaB08g37049' => 'bca', 'BcaC02g12643' => 'bca', 'BcaC02g12644' => 'bca', 'BcaC02g12645' => 'bca', 'BcaC03g13371' => 'bca', 'BcaC03g13373' => 'bca', 'BcaC03g14219' => 'bca', 'BcaC04g19216' => 'bca', 'BcaC04g20085' => 'bca', 'BcaC04g20087' => 'bca', 'BcaC06g31095' => 'bca', 'BcaNung01932' => 'bca', 'BcaNung03893' => 'bca', 'BcaNung03894' => 'bca', 'BcaNung03895' => 'bca', 'BolC2t06465H' => 'bol', 'BolC2t06469H' => 'bol', 'BolC2t07636H' => 'bol', 'BolC4t21774H' => 'bol', 'BolC4t21775H' => 'bol', 'BolC9t57652H' => 'bol', 'BolC9t57653H' => 'bol', 'BolC9t57654H' => 'bol', 'BolC9t59355H' => 'bol', 'BolC9t59356H' => 'bol', 'BraA02t05085Z' => 'bra', 'BraA02t05974Z' => 'bra', 'BraA05t19104Z' => 'bra', 'BraA05t19105Z' => 'bra', 'BraA05t19106Z' => 'bra', 'BraA10t43475Z' => 'bra', 'BraA10t43476Z' => 'bra', 'C02p05100' => 'bna', 'C02p05150' => 'bna', 'C02p05190' => 'bna', 'C02p15190' => 'bna', 'C04p01190' => 'bna', 'C04p01200' => 'bna', 'C09p48060' => 'bna', 'C09p48070' => 'bna', 'C09p65270' => 'bna', 'C09p65290' => 'bna', 'CAN.G1325.1' => 'can', 'CAN.G21.51' => 'can', 'CANSAT25G2684' => 'cansat', 'CANSAT56G0431' => 'cansat', 'CANSAT56G1171' => 'cansat', 'CANSAT56G1174' => 'cansat', 'CANSAT56G1415' => 'cansat', 'CANSAT56G4117' => 'cansat', 'CANSAT56G4472' => 'cansat', 'CARHR142070' => 'chi', 'CARHR142100' => 'chi', 'CARHR152160' => 'chi', 'CARHR201680' => 'chi', 'CARHR270110' => 'chi', 'Carub.0001s3062' => 'cru', 'Carub.0004s2945' => 'cru', 'Carub.0004s2946' => 'cru', 'Carub.0004s2947' => 'cru', 'Carub.0006s1001' => 'cru', 'Carub.0008s1697' => 'cru', 'Ca_09541_v3' => 'car', 'Ca_12736_v3' => 'car', 'Ca_12742_v3' => 'car', 'Ca_23491_v3' => 'car', 'Cc08_g09200' => 'ccan', 'Cc11_g06610' => 'ccan', 'Cc11_g06620' => 'ccan', 'Cc11_g06640' => 'ccan', 'Cc11_g06650' => 'ccan', 'CDE04G1139' => 'cde', 'CDE04G2589' => 'cde', 'CDE07G0210' => 'cde', 'Cfa003745' => 'cfa', 'Cfa003746' => 'cfa', 'Cfa013354' => 'cfa', 'Ciclev10007892m.g' => 'ccl', 'Ciclev10019421m.g' => 'ccl', 'Ciclev10031018m.g' => 'ccl', 'CiPaw.01G081600' => 'cil', 'CiPaw.01G096700' => 'cil', 'CiPaw.01G104400' => 'cil', 'CiPaw.08G024500' => 'cil', 'ClCG05G000160' => 'cla', 'COL.COLO4_06211' => 'col', 'COL.COLO4_18675' => 'col', 'COL.COLO4_18676' => 'col', 'COL.COLO4_29747' => 'col', 'COL.COLO4_31064' => 'col', 'Cpa.g.sc141.12' => 'cpa', 'Cpa.g.sc28.22' => 'cpa', 'Cre03.g177600' => 'cre', 'CsaV3_3G007270' => 'csa', 'CSS0002065' => 'camsi', 'CSS0017743' => 'camsi', 'CSS0025907' => 'camsi', 'CSS0028722' => 'camsi', 'CSS0039289' => 'camsi', 'CSS0042380' => 'camsi', 'CSS0044211' => 'camsi', 'CSS0045984' => 'camsi', 'DCAR_007710' => 'dca', 'DCAR_008625' => 'dca', 'DCAR_022331' => 'dca', 'Dinv32640' => 'din', 'Duzib133G0728' => 'dzi', 'Duzib138G0127' => 'dzi', 'Duzib168G0883' => 'dzi', 'ECA234G1156' => 'eca', 'ECA246G3977' => 'eca', 'EL10Ac1g00196' => 'bvu', 'EL10Ac2g04050' => 'bvu', 'EL10Ac3g06315' => 'bvu', 'EL10Ac5g12702' => 'bvu', 'EL10Ac5g12703' => 'bvu', 'EL10Ac6g15213' => 'bvu', 'EL10Ac6g15214' => 'bvu', 'EL10Ac9g20965' => 'bvu', 'Eucgr.C02902' => 'egr', 'Eucgr.D02649' => 'egr', 'Eucgr.J01272' => 'egr', 'FAN01G2397' => 'fan', 'FAN03G0969' => 'fan', 'FAN03G1794' => 'fan', 'FAN03G2637' => 'fan', 'FAN03G2798' => 'fan', 'FAN03G3113' => 'fan', 'FAN06G0947' => 'fan', 'FAN06G1387' => 'fan', 'FAN10G0887' => 'fan', 'FAN10G2529' => 'fan', 'FAN10G2915' => 'fan', 'FAN10G4262' => 'fan', 'FAN15G0886' => 'fan', 'FAN20G2453' => 'fan', 'FAN27G3209' => 'fan', 'FvH4_2g35870' => 'fve', 'FvH4_7g17510' => 'fve', 'FvH4_7g17511' => 'fve', 'Glyma.03G260600' => 'gma', 'Glyma.07G050900' => 'gma', 'Glyma.16G019900' => 'gma', 'Glyma.16G020000' => 'gma', 'Glyma.16G020100' => 'gma', 'Glyma.17G195100' => 'gma', 'Glyma.19G259300' => 'gma', 'Glyma.19G259400' => 'gma', 'Gohir.A07G022900' => 'ghi', 'Gohir.A12G115850' => 'ghi', 'Gohir.A12G116100' => 'ghi', 'Gohir.D07G026500' => 'ghi', 'Gohir.D12G119600' => 'ghi', 'Gorai.001G027500' => 'gra', 'Gorai.008G129900' => 'gra', 'Gorai.008G130100' => 'gra', 'GSVIVG01027428001' => 'vvi', 'GSVIVG01035650001' => 'vvi', 'HanXRQChr09g0269991' => 'han', 'HanXRQChr09g0270021' => 'han', 'HanXRQChr09g0270051' => 'han', 'HanXRQChr10g0279341' => 'han', 'HanXRQChr13g0396541' => 'han', 'HanXRQChr15g0496021' => 'han', 'Haze_15721' => 'cav', 'Haze_15722' => 'cav', 'Haze_21873' => 'cav', 'Hma1.2p1_0422F.1_g150180' => 'hma', 'Hma1.2p1_1105F.1_g257630' => 'hma', 'Hma1.2p1_1996F.1_g310390' => 'hma', 'Hma1.2p1_1996F.1_g310400' => 'hma', 'Hma1.2p1_2299F.1_g319170' => 'hma', 'Hma1.2p1_2299F.1_g319180' => 'hma', 'Hma1.2p1_2508F.1_g323560' => 'hma', 'Hma1.2p1_2508F.1_g323570' => 'hma', 'HPP92_007313' => 'vpl', 'HPP92_007323' => 'vpl', 'HPP92_007324' => 'vpl', 'HPP92_008143' => 'vpl', 'HPP92_008144' => 'vpl', 'Hund04537' => 'sun', 'Hund19528' => 'sun', 'Hund19529' => 'sun', 'Hund27155' => 'sun', 'Lalb_Chr03g0028251' => 'lal', 'Lalb_Chr03g0028261' => 'lal', 'Lalb_Chr15g0076471' => 'lal', 'Lalb_Chr15g0076481' => 'lal', 'Lalb_Chr15g0076491' => 'lal', 'Lalb_Chr17g0342971' => 'lal', 'Lalb_Chr24g0399331' => 'lal', 'Lalb_Chr24g0399341' => 'lal', 'Lalb_Chr24g0399351' => 'lal', 'Lj1g0010102' => 'lja', 'Lj1g0022611' => 'lja', 'Lj3g0014105' => 'lja', 'Lj3g0025423' => 'lja', 'Lj7C494G1' => 'lonja', 'Lj8A589T30' => 'lonja', 'Lsat_1_v5_gn_4_41641' => 'lsa', 'Lsat_1_v5_gn_5_33021' => 'lsa', 'Manes.03G061900' => 'mes', 'Manes.05G017300' => 'mes', 'Mapoly0002s0002' => 'mpo', 'Mapoly0011s0042' => 'mpo', 'Mapoly0027s0065' => 'mpo', 'Mapoly0097s0030' => 'mpo', 'Mapoly1294s0001' => 'mpo', 'Mapoly2307s0001' => 'mpo', 'MBI04_g14934_MAGBIO' => 'mbi', 'MBI04_g15580_MAGBIO' => 'mbi', 'MBI04_g43055_MAGBIO' => 'mbi', 'MBI09_g04372_MAGBIO' => 'mbi', 'MBI09_g04379_MAGBIO' => 'mbi', 'MBI09_g04380_MAGBIO' => 'mbi', 'MBI09_g04382_MAGBIO' => 'mbi', 'MBI12_g21575_MAGBIO' => 'mbi', 'MD01G1087700' => 'mdo', 'MD01G1087800' => 'mdo', 'MD07G1157900' => 'mdo', 'MD07G1158000' => 'mdo', 'MD08G1116100' => 'mdo', 'MD15G1095800' => 'mdo', 'Medtr1g026680' => 'mtr', 'Medtr1g026710' => 'mtr', 'Medtr1g029290' => 'mtr', 'Medtr1g051520' => 'mtr', 'Medtr5g005540' => 'mtr', 'Medtr6g033470' => 'mtr', 'Medtr6g033475' => 'mtr', 'Medtr7g118095' => 'mtr', 'Medtr7g118100' => 'mtr', 'Medtr8g024550' => 'mtr', 'Medtr8g024560' => 'mtr', 'MELO3C005948.2' => 'cme', 'Migut.B01920' => 'egut', 'Migut.E01517' => 'egut', 'MSTRG.19686' => 'ama', 'Nitab4.5_0000069g0210' => 'nta', 'Nitab4.5_0000337g0150' => 'nta', 'Nitab4.5_0000406g0020' => 'nta', 'Nitab4.5_0002387g0090' => 'nta', 'Nitab4.5_0002955g0010' => 'nta', 'Nitab4.5_0002955g0040' => 'nta', 'Nitab4.5_0004898g0010' => 'nta', 'Nitab4.5_0004898g0020' => 'nta', 'Nn1g00418' => 'nnu', 'Nn2g11657' => 'nnu', 'Nn3g18853' => 'nnu', 'Oeu057709.1' => 'oeu', 'Os01g0687800' => 'osa', 'Os02g0124400' => 'osa', 'Os02g0124599' => 'osa', 'Os02g0124600' => 'osa', 'Os03g0563100' => 'osa', 'Os04g0190000' => 'osa', 'Os04g0360500' => 'osa', 'Os04g0361500' => 'osa', 'Os08g0114300' => 'osa', 'Os08g0519100' => 'osa', 'Peaxi162Scf00603g00519' => 'pax', 'Peaxi162Scf00615g00311' => 'pax', 'Peaxi162Scf00657g00068' => 'pax', 'Peaxi162Scf01192g00008' => 'pax', 'PGR004G0095' => 'pgr', 'PGR004G0788' => 'pgr', 'PGR044G1300' => 'pgr', 'PGSC0003DMG400005494' => 'stu', 'PGSC0003DMG400008498' => 'stu', 'PGSC0003DMG400019733' => 'stu', 'PGSC0003DMG400024003' => 'stu', 'Phvul.001G074300' => 'pvu', 'Phvul.009G257400' => 'pvu', 'Phvul.009G257600' => 'pvu', 'Phvul.010G118400' => 'pvu', 'Potri.002G178300' => 'ptr', 'Potri.002G178400' => 'ptr', 'Potri.018G039600' => 'ptr', 'Pp3c21_20320' => 'ppa', 'Pp3c3_37800' => 'ppa', 'Pp3c4_7460' => 'ppa', 'Pp3c6_25220' => 'ppa', 'Pp3c6_25270' => 'ppa', 'Pp3c8_13620' => 'ppa', 'Prupe.1G450800' => 'ppe', 'Prupe.2G196400' => 'ppe', 'Psat0s1315g0400' => 'psa', 'Psat0s1315g0440' => 'psa', 'Psat0s1315g0480' => 'psa', 'Psat0s1315g0560' => 'psa', 'Psat0s3511g0040' => 'psa', 'Psat0s3511g0080' => 'psa', 'Psat0s3850g0080' => 'psa', 'Psat3g005720' => 'psa', 'Psat4g217480' => 'psa', 'Psat6g075560' => 'psa', 'Psat6g075600' => 'psa', 'PSO063G3561' => 'pso', 'PSO170G2636' => 'pso', 'PSO170G2924' => 'pso', 'PSO210G2723' => 'pso', 'PSO210G2808' => 'pso', 'PSO210G3927' => 'pso', 'PSO210G5589' => 'pso', 'PSO339G3698' => 'pso', 'PSO421G0600' => 'pso', 'PSO455G0150' => 'pso', 'PSO673G0010' => 'pso', 'QL08p046853' => 'qlo', 'QL08p046869' => 'qlo', 'QL08p046907' => 'qlo', 'QL12p029460' => 'qlo', 'RcHm_v2.0_Chr1g0360921' => 'rch', 'RcHm_v2.0_Chr1g0360951' => 'rch', 'RcHm_v2.0_Chr3g0481291' => 'rch', 'RcHm_v2.0_Chr3g0481311' => 'rch', 'RcHm_v2.0_Chr6g0305951' => 'rch', 'Rhsim01G0179200' => 'rsi', 'Rhsim01G0179300' => 'rsi', 'Rhsim01G0179500' => 'rsi', 'Rhsim01G0179700' => 'rsi', 'Rhsim02G0180200' => 'rsi', 'RhsimUnG0235800' => 'rsi', 'RhsimUnG0235900' => 'rsi', 'RhsimUnG0236000' => 'rsi', 'RhsimUnG0236100' => 'rsi', 'Sabra02G0135300' => 'sbr', 'Sabra18G0039600' => 'sbr', 'SalBow1G0207' => 'sbo', 'SalBow1G1045' => 'sbo', 'SalBow1G1271' => 'sbo', 'SalBow1G2106' => 'sbo', 'SalBow4G0614' => 'sbo', 'Sc01g0002260' => 'sci', 'Sc09g0009150' => 'sci', 'Sc23g0001850' => 'sci', 'SEGI_00148' => 'sgi', 'SEGI_00310' => 'sgi', 'SEGI_00413' => 'sgi', 'SEGI_00590' => 'sgi', 'SEGI_01551' => 'sgi', 'SEGI_01740' => 'sgi', 'SEGI_01780' => 'sgi', 'SEGI_02531' => 'sgi', 'SEGI_02672' => 'sgi', 'SEGI_04193' => 'sgi', 'SEGI_05074' => 'sgi', 'SEGI_05236' => 'sgi', 'SEGI_05506' => 'sgi', 'SEGI_07508' => 'sgi', 'SEGI_08224' => 'sgi', 'SEGI_09284' => 'sgi', 'SEGI_09404' => 'sgi', 'SEGI_09990' => 'sgi', 'SEGI_10807' => 'sgi', 'SEGI_11079' => 'sgi', 'SEGI_11924' => 'sgi', 'SEGI_14512' => 'sgi', 'SEGI_14524' => 'sgi', 'SEGI_14903' => 'sgi', 'SEGI_15570' => 'sgi', 'SEGI_15687' => 'sgi', 'SEGI_15771' => 'sgi', 'SEGI_16872' => 'sgi', 'SEGI_17001' => 'sgi', 'SEGI_17869' => 'sgi', 'SEGI_18245' => 'sgi', 'SEGI_18831' => 'sgi', 'SEGI_20041' => 'sgi', 'SEGI_20564' => 'sgi', 'SEGI_20880' => 'sgi', 'SEGI_21721' => 'sgi', 'SEGI_22021' => 'sgi', 'SEGI_22842' => 'sgi', 'SEGI_22934' => 'sgi', 'SEGI_23243' => 'sgi', 'SEGI_28109' => 'sgi', 'SEGI_30634' => 'sgi', 'SEGI_30929' => 'sgi', 'SEGI_31555' => 'sgi', 'SEGI_32616' => 'sgi', 'SEGI_32637' => 'sgi', 'SEGI_34721' => 'sgi', 'SEGI_34740' => 'sgi', 'SEGI_34991' => 'sgi', 'SEGI_35363' => 'sgi', 'SEGI_36513' => 'sgi', 'SEGI_38430' => 'sgi', 'SEGI_39399' => 'sgi', 'SEGI_39713' => 'sgi', 'SEGI_40197' => 'sgi', 'SEGI_40514' => 'sgi', 'SEGI_40923' => 'sgi', 'SEGI_41096' => 'sgi', 'SGA_v2.0_scaffold163G38080' => 'sas', 'SGA_v2.0_scaffold5G03068' => 'sas', 'SMO112G0013' => 'smo', 'SMO112G0020' => 'smo', 'SMO112G0100' => 'smo', 'SMO118G0244' => 'smo', 'SMO144G0211' => 'smo', 'SMO147G0159' => 'smo', 'SMO192G0006' => 'smo', 'SMO236G0060' => 'smo', 'SMO236G0066' => 'smo', 'SMO236G0104' => 'smo', 'SMO236G0118' => 'smo', 'SMO266G0034' => 'smo', 'SMO307G0092' => 'smo', 'SMO352G0097' => 'smo', 'SMO364G0314' => 'smo', 'SMO364G0490' => 'smo', 'SMO364G0613' => 'smo', 'SMO364G0762' => 'smo', 'SMO364G0817' => 'smo', 'Solyc08g068420.3' => 'sly', 'Solyc09g005180.4' => 'sly', 'Sopen08g022300' => 'spe', 'Sopen09g001160' => 'spe', 'Sp3g21360' => 'spa', 'Sp4g28770' => 'spa', 'Sp4g28780' => 'spa', 'Sp4g28790' => 'spa', 'Sp6g18280' => 'spa', 'Sp6g18290' => 'spa', 'Sp6g32060' => 'spa', 'TAR375G0779' => 'tar', 'TAR383G0673' => 'tar', 'THA.LOC104810229' => 'tha', 'THA.LOC104814776' => 'tha', 'THA.LOC104817396' => 'tha', 'THA.LOC104824215' => 'tha', 'Thecc.01G334500' => 'tca', 'Thecc.09G042100' => 'tca', 'Thecc.09G042200' => 'tca', 'Thhalv10001364m.g' => 'esa', 'Thhalv10001763m.g' => 'esa', 'Thhalv10002773m.g' => 'esa', 'Thhalv10002834m.g' => 'esa', 'Thhalv10013068m.g' => 'esa', 'TPR.G24540' => 'tpr', 'TPR.G25273' => 'tpr', 'TPR.G8683' => 'tpr', 'TWI23G0589' => 'twi', 'TWI23G0646' => 'twi', 'TWI23G1192' => 'twi', 'TWI34G0590' => 'twi', 'unitig_32.g11025' => 'ugi', 'unitig_32.g11026' => 'ugi', 'unitig_61.g26364' => 'ugi', 'unitig_61.g26365' => 'ugi', 'vmacro11069' => 'vma', 'vmacro11070' => 'vma', 'VMungo0331G0559' => 'vmu', 'VMungo0331G1337' => 'vmu', 'VMungo0331G1732' => 'vmu', 'VMungo0647G2116' => 'vmu', 'VMungo1284G0001' => 'vmu', 'VMungo1309G0966' => 'vmu', 'VMungo1309G1698' => 'vmu', 'VMungo1309G1964' => 'vmu', 'VMungo1309G2276' => 'vmu', 'VMungo1309G2521' => 'vmu', 'Zm00001eb030340' => 'zma', 'Zm00001eb037130' => 'zma', 'Zm00001eb043120' => 'zma', 'Zm00001eb052920' => 'zma', 'Zm00001eb059530' => 'zma', 'Zm00001eb072160' => 'zma', 'Zm00001eb075590' => 'zma', 'Zm00001eb154880' => 'zma', 'Zm00001eb173900' => 'zma', 'Zm00001eb206270' => 'zma', 'Zm00001eb219950' => 'zma', 'Zm00001eb236290' => 'zma', 'Zm00001eb236880' => 'zma', 'Zm00001eb242160' => 'zma', 'Zm00001eb305340' => 'zma', 'Zm00001eb336540' => 'zma', 'Zm00001eb386780' => 'zma', 'Zm00001eb421440' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001113' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001113' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001113' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001113' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151