Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001041', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001041' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001041' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001041' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001041' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001041', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001041' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001041' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001041' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001041' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001041', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001041' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001041' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001041' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001041' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001041', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001041' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001041', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '583', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' ) ), 'genes' => array( 'A01p30110' => 'bna', 'A05p10160' => 'bna', 'A05p25310' => 'bna', 'A06p07870' => 'bna', 'A08p09380' => 'bna', 'A08p37320' => 'bna', 'A09p16830' => 'bna', 'A09p68280' => 'bna', 'A10p02090' => 'bna', 'Aa31LG1G20910' => 'aar', 'Aa31LG1G3650' => 'aar', 'Aa31LG2G13950' => 'aar', 'Aa31LG2G14000' => 'aar', 'Aa31LG2G9380' => 'aar', 'Aa31LG8G17630' => 'aar', 'Aa31LG9G15590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1263' => 'aag', 'Actinidia11800' => 'ach', 'Actinidia23690' => 'ach', 'Actinidia27274' => 'ach', 'Actinidia39303' => 'ach', 'Actinidia39460' => 'ach', 'Ah.07g201140' => 'amhyb', 'AL1G13060' => 'aly', 'AL1G22200' => 'aly', 'AL1G46120' => 'aly', 'AL212U10010' => 'aly', 'AL2G15080' => 'aly', 'AL3G54030' => 'aly', 'AL4G31610' => 'aly', 'Aqoxy1G02656' => 'aox', 'Aqoxy3G02120' => 'aox', 'Aqoxy4G01359' => 'aox', 'arahy.Tifrunner.gnm1.ann1.199BN4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IX2GXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZA4PH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J18N96' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8XL0V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LL03YI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PFWX3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDJ44V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XS943T' => 'arhy', 'AT1G03550' => 'ath', 'AT1G11180' => 'ath', 'AT1G32050' => 'ath', 'AT1G61250' => 'ath', 'AT2G20840' => 'ath', 'ATR0693G316' => 'atr', 'ATR0829G055' => 'atr', 'Atru.chr10.1976' => 'acertr', 'Atru.chr10.1977' => 'acertr', 'Atru.chr6.1573' => 'acertr', 'Atru.chr6.3046' => 'acertr', 'AUR62007380' => 'cqu', 'AUR62014748' => 'cqu', 'AUR62016926' => 'cqu', 'AUR62018608' => 'cqu', 'BcaB02g06918' => 'bca', 'BcaB02g09418' => 'bca', 'BcaB03g13273' => 'bca', 'BcaB03g13771' => 'bca', 'BcaB04g18002' => 'bca', 'BcaB04g20329' => 'bca', 'BcaB07g31268' => 'bca', 'BcaC02g10580' => 'bca', 'BcaC02g11670' => 'bca', 'BcaC04g22317' => 'bca', 'BcaC05g24522' => 'bca', 'BcaC05g24984' => 'bca', 'BcaC05g27933' => 'bca', 'BcaC06g31840' => 'bca', 'BcaC06g36775' => 'bca', 'BcaC07g36955' => 'bca', 'BcaC07g37636' => 'bca', 'BcaC07g42242' => 'bca', 'BcaC07g42251' => 'bca', 'BcaNung04475' => 'bca', 'BcaNung04476' => 'bca', 'BcaNung06890' => 'bca', 'BolC1t03780H' => 'bol', 'BolC4t22903H' => 'bol', 'BolC4t24256H' => 'bol', 'BolC5t28978H' => 'bol', 'BolC5t29688H' => 'bol', 'BolC5t32674H' => 'bol', 'BolC7t40458H' => 'bol', 'BolC8t46866H' => 'bol', 'BolC8t48009H' => 'bol', 'BolC8t52800H' => 'bol', 'BolC9t54971H' => 'bol', 'BraA01t03142Z' => 'bra', 'BraA05t19957Z' => 'bra', 'BraA05t21416Z' => 'bra', 'BraA06t23986Z' => 'bra', 'BraA07t27784Z' => 'bra', 'BraA08t32936Z' => 'bra', 'BraA08t35629Z' => 'bra', 'BraA09t37320Z' => 'bra', 'BraA09t42164Z' => 'bra', 'BraA10t42478Z' => 'bra', 'C01p38170' => 'bna', 'C04p12570' => 'bna', 'C04p27240' => 'bna', 'C05p02000' => 'bna', 'C05p09460' => 'bna', 'C05p39380' => 'bna', 'C07p00060' => 'bna', 'C07p34280' => 'bna', 'C08p00680' => 'bna', 'C08p52740' => 'bna', 'C08p52840' => 'bna', 'C09p20740' => 'bna', 'CAN.G132.13' => 'can', 'CAN.G168.27' => 'can', 'CAN.G1705.2' => 'can', 'CAN.G1881.1' => 'can', 'CAN.G773.21' => 'can', 'CAN.G996.10' => 'can', 'CANSAT21G0037' => 'cansat', 'CANSAT56G2686' => 'cansat', 'CANSAT64G1336' => 'cansat', 'CARHR002910' => 'chi', 'CARHR011400' => 'chi', 'CARHR031400' => 'chi', 'CARHR051380' => 'chi', 'CARHR111570' => 'chi', 'CARHR129730' => 'chi', 'Carub.0001s0269' => 'cru', 'Carub.0001s1076' => 'cru', 'Carub.0001s3037' => 'cru', 'Carub.0002s0391' => 'cru', 'Carub.0003s3549' => 'cru', 'Ca_00277_v3' => 'car', 'Ca_00283_v3' => 'car', 'Ca_18500_v3' => 'car', 'Ca_20686_v3' => 'car', 'Ca_25154_v3' => 'car', 'CBR_g21821' => 'cbr', 'Cc02_g12680' => 'ccan', 'Cc08_g03950' => 'ccan', 'CDE02G4216' => 'cde', 'CDE04G2746' => 'cde', 'CDE05G0829' => 'cde', 'CDE05G2540' => 'cde', 'Cfa000378' => 'cfa', 'Cfa012549' => 'cfa', 'Cfa014561' => 'cfa', 'Ciclev10002151m.g' => 'ccl', 'Ciclev10016025m.g' => 'ccl', 'Ciclev10017555m.g' => 'ccl', 'CiPaw.03G171400' => 'cil', 'CiPaw.04G123500' => 'cil', 'CiPaw.09G160300' => 'cil', 'CiPaw.10G120800' => 'cil', 'CiPaw.11G100800' => 'cil', 'CiPaw.12G069900' => 'cil', 'ClCG00G003960' => 'cla', 'ClCG01G022570' => 'cla', 'ClCG02G001250' => 'cla', 'ClCG10G001190' => 'cla', 'COL.COLO4_13707' => 'col', 'COL.COLO4_13716' => 'col', 'COL.COLO4_19820' => 'col', 'COL.COLO4_31548' => 'col', 'COL.COLO4_31549' => 'col', 'COL.COLO4_35362' => 'col', 'Cpa.g.c26180' => 'cpa', 'Cpa.g.sc27.100' => 'cpa', 'Cpa.g.sc34.116' => 'cpa', 'Cre02.g089900' => 'cre', 'CsaV3_3G001230' => 'csa', 'CsaV3_6G049760' => 'csa', 'CsaV3_7G004190' => 'csa', 'CSS0002358' => 'camsi', 'CSS0005416' => 'camsi', 'CSS0020658' => 'camsi', 'CSS0025509' => 'camsi', 'CSS0029079' => 'camsi', 'CSS0035165' => 'camsi', 'CSS0035458' => 'camsi', 'CSS0043700' => 'camsi', 'CSS0049049' => 'camsi', 'DCAR_004130' => 'dca', 'DCAR_008062' => 'dca', 'DCAR_009735' => 'dca', 'DCAR_019193' => 'dca', 'DCAR_021230' => 'dca', 'DCAR_028129' => 'dca', 'Dinv01392' => 'din', 'Dinv06904' => 'din', 'Dinv23695' => 'din', 'Dinv29026' => 'din', 'Dinv39792' => 'din', 'Dinv40513' => 'din', 'Duzib068G1102' => 'dzi', 'Duzib132G0869' => 'dzi', 'Duzib160G0238' => 'dzi', 'Duzib192G0391' => 'dzi', 'Duzib205G1313' => 'dzi', 'Duzib235G0720' => 'dzi', 'Duzib248G1533' => 'dzi', 'ECA233G4857' => 'eca', 'ECA233G4912' => 'eca', 'ECA234G4418' => 'eca', 'ECA236G2572' => 'eca', 'ECA246G1420' => 'eca', 'ECA248G3710' => 'eca', 'EL10Ac5g11977' => 'bvu', 'EL10Ac8g20636' => 'bvu', 'EL10Ac9g20675' => 'bvu', 'Eucgr.D02626' => 'egr', 'Eucgr.E03370' => 'egr', 'Eucgr.K00942' => 'egr', 'Eucgr.L01445' => 'egr', 'FAN04G0813' => 'fan', 'FAN05G0880' => 'fan', 'FAN08G0271' => 'fan', 'FAN11G3350' => 'fan', 'FAN13G1846' => 'fan', 'FAN14G5967' => 'fan', 'FAN18G1131' => 'fan', 'FAN18G4014' => 'fan', 'FAN21G4031' => 'fan', 'FAN25G1672' => 'fan', 'FvH4_3g04440' => 'fve', 'FvH4_5g23510' => 'fve', 'FvH4_6g44940' => 'fve', 'Glyma.01G010300' => 'gma', 'Glyma.06G296900' => 'gma', 'Glyma.07G191600' => 'gma', 'Glyma.09G210800' => 'gma', 'Glyma.12G108200' => 'gma', 'Glyma.12G202000' => 'gma', 'Glyma.13G185100' => 'gma', 'Glyma.13G244600' => 'gma', 'Glyma.13G300100' => 'gma', 'Glyma.15G069100' => 'gma', 'Gohir.A01G015700' => 'ghi', 'Gohir.A03G000020' => 'ghi', 'Gohir.A04G105200' => 'ghi', 'Gohir.A05G163800' => 'ghi', 'Gohir.A06G124000' => 'ghi', 'Gohir.A06G124202' => 'ghi', 'Gohir.A09G071166' => 'ghi', 'Gohir.A09G071232' => 'ghi', 'Gohir.A13G056700' => 'ghi', 'Gohir.D01G015700' => 'ghi', 'Gohir.D02G095650' => 'ghi', 'Gohir.D03G177300' => 'ghi', 'Gohir.D04G145000' => 'ghi', 'Gohir.D05G166700' => 'ghi', 'Gohir.D06G128900' => 'ghi', 'Gohir.D06G129000' => 'ghi', 'Gohir.D09G070950' => 'ghi', 'Gohir.D09G071000' => 'ghi', 'Gohir.D13G065200' => 'ghi', 'Gorai.002G017400' => 'gra', 'Gorai.003G186500' => 'gra', 'Gorai.005G109400' => 'gra', 'Gorai.006G085800' => 'gra', 'Gorai.006G085900' => 'gra', 'Gorai.009G171800' => 'gra', 'Gorai.010G150400' => 'gra', 'Gorai.010G150500' => 'gra', 'Gorai.012G131000' => 'gra', 'Gorai.013G074400' => 'gra', 'GSVIVG01001420001' => 'vvi', 'GSVIVG01005834001' => 'vvi', 'GSVIVG01012985001' => 'vvi', 'GSVIVG01030566001' => 'vvi', 'HanXRQChr01g0003791' => 'han', 'HanXRQChr04g0125731' => 'han', 'HanXRQChr07g0194321' => 'han', 'HanXRQChr14g0428051' => 'han', 'HanXRQChr15g0480331' => 'han', 'HanXRQChr16g0517921' => 'han', 'HanXRQChr17g0553401' => 'han', 'Haze_06548' => 'cav', 'Haze_08114' => 'cav', 'Haze_08115' => 'cav', 'Haze_13106' => 'cav', 'Haze_13689' => 'cav', 'Hma1.2p1_0144F.1_g065040' => 'hma', 'Hma1.2p1_0213F.1_g090450' => 'hma', 'Hma1.2p1_0835F.1_g225800' => 'hma', 'Hma1.2p1_0875F.1_g231570' => 'hma', 'Hma1.2p1_1486F.1_g286530' => 'hma', 'HPP92_004201' => 'vpl', 'HPP92_012824' => 'vpl', 'HPP92_014060' => 'vpl', 'HPP92_016413' => 'vpl', 'Hund01111' => 'sun', 'Hund01112' => 'sun', 'Hund11151' => 'sun', 'Hund21265' => 'sun', 'Hund23639' => 'sun', 'Lalb_Chr01g0005381' => 'lal', 'Lalb_Chr03g0029241' => 'lal', 'Lalb_Chr05g0215621' => 'lal', 'Lalb_Chr05g0218261' => 'lal', 'Lalb_Chr09g0325331' => 'lal', 'Lalb_Chr09g0327431' => 'lal', 'Lalb_Chr14g0366691' => 'lal', 'Lalb_Chr15g0089991' => 'lal', 'Lalb_Chr20g0122171' => 'lal', 'Lalb_Chr20g0122181' => 'lal', 'Lalb_Chr22g0356431' => 'lal', 'Lj1A1211T69' => 'lonja', 'Lj1C734G2' => 'lonja', 'Lj2C282T15' => 'lonja', 'Lj2g0001582' => 'lja', 'Lj2g0012743' => 'lja', 'Lj2g0027040' => 'lja', 'Lj3g0013502' => 'lja', 'Lj3g0014970' => 'lja', 'Lj4g0001488' => 'lja', 'Lj6g0000396' => 'lja', 'Lj8A116T73' => 'lonja', 'Lj8C318T18' => 'lonja', 'Lsat_1_v5_gn_1_125001' => 'lsa', 'Lsat_1_v5_gn_1_125081' => 'lsa', 'Lsat_1_v5_gn_3_21001' => 'lsa', 'Lsat_1_v5_gn_3_39341' => 'lsa', 'Lsat_1_v5_gn_4_56060' => 'lsa', 'Lsat_1_v5_gn_4_70280' => 'lsa', 'Lsat_1_v5_gn_6_17720' => 'lsa', 'Lsat_1_v5_gn_7_19881' => 'lsa', 'Lsat_1_v5_gn_8_131521' => 'lsa', 'Manes.12G087800' => 'mes', 'Manes.13G150100' => 'mes', 'Manes.15G184900' => 'mes', 'Manes.16G022800' => 'mes', 'Manes.16G022901' => 'mes', 'Manes.17G010900' => 'mes', 'Manes.17G040700' => 'mes', 'Mapoly0055s0011' => 'mpo', 'Mapoly0237s0001' => 'mpo', 'MBI02_g29388_MAGBIO' => 'mbi', 'MBI04_g36020_MAGBIO' => 'mbi', 'MBI10_g18716_MAGBIO' => 'mbi', 'MBI14_g17951_MAGBIO' => 'mbi', 'MBI18_g32894_MAGBIO' => 'mbi', 'MBI18_g43248_MAGBIO' => 'mbi', 'MBI18_g43835_MAGBIO' => 'mbi', 'MCO05G532' => 'mco', 'MCO16G087' => 'mco', 'MD00G1068600' => 'mdo', 'MD05G1323100' => 'mdo', 'MD06G1023700' => 'mdo', 'MD09G1091600' => 'mdo', 'MD10G1300900' => 'mdo', 'MD17G1081500' => 'mdo', 'Medtr2g012560' => 'mtr', 'Medtr2g090115' => 'mtr', 'Medtr4g046110' => 'mtr', 'Medtr4g086230' => 'mtr', 'Medtr4g090510' => 'mtr', 'Medtr5g027790' => 'mtr', 'MELO3C007320.2' => 'cme', 'MELO3C013812.2' => 'cme', 'MELO3C018758.2' => 'cme', 'Migut.A00587' => 'egut', 'Migut.E01329' => 'egut', 'Migut.H01035' => 'egut', 'Migut.H01496' => 'egut', 'Migut.M01157' => 'egut', 'MSTRG.11898' => 'ama', 'MSTRG.13193' => 'ama', 'MSTRG.14190' => 'ama', 'MSTRG.14694' => 'ama', 'MSTRG.15894' => 'ama', 'MSTRG.25704' => 'ama', 'MSTRG.7326' => 'ama', 'Nitab4.5_0000543g0170' => 'nta', 'Nitab4.5_0000635g0120' => 'nta', 'Nitab4.5_0000809g0100' => 'nta', 'Nitab4.5_0001770g0160' => 'nta', 'Nitab4.5_0003018g0120' => 'nta', 'Nitab4.5_0003114g0050' => 'nta', 'Nitab4.5_0003152g0040' => 'nta', 'Nitab4.5_0003223g0010' => 'nta', 'Nitab4.5_0005244g0010' => 'nta', 'Nitab4.5_0006260g0030' => 'nta', 'Nitab4.5_0006694g0010' => 'nta', 'Nitab4.5_0007732g0040' => 'nta', 'Nitab4.5_0009520g0040' => 'nta', 'Nitab4.5_0010167g0020' => 'nta', 'Nn1g01913' => 'nnu', 'Nn1g03947' => 'nnu', 'Nn1g06693' => 'nnu', 'Oeu001192.1' => 'oeu', 'Oeu014299.1' => 'oeu', 'Oeu042232.1' => 'oeu', 'Oeu058397.1' => 'oeu', 'Os01g0780500' => 'osa', 'Os02g0697800' => 'osa', 'Os03g0582200' => 'osa', 'Os04g0597000' => 'osa', 'Os05g0503000' => 'osa', 'Os07g0564600' => 'osa', 'Os08g0161750' => 'osa', 'Peaxi162Scf00007g02853' => 'pax', 'Peaxi162Scf00031g00073' => 'pax', 'Peaxi162Scf00485g00211' => 'pax', 'Peaxi162Scf00527g00015' => 'pax', 'Peaxi162Scf00608g00078' => 'pax', 'Peaxi162Scf00879g00020' => 'pax', 'PGR031G1201' => 'pgr', 'PGR042G0518' => 'pgr', 'PGR042G1474' => 'pgr', 'PGR042G3844' => 'pgr', 'PGSC0003DMG400007861' => 'stu', 'PGSC0003DMG400010825' => 'stu', 'PGSC0003DMG400018366' => 'stu', 'PGSC0003DMG400021674' => 'stu', 'PGSC0003DMG400022419' => 'stu', 'Phvul.002G133200' => 'pvu', 'Phvul.002G223700' => 'pvu', 'Phvul.005G106900' => 'pvu', 'Phvul.006G190200' => 'pvu', 'Phvul.011G112500' => 'pvu', 'Potri.001G134100' => 'ptr', 'Potri.003G099300' => 'ptr', 'Potri.004G036600' => 'ptr', 'Potri.004G036700' => 'ptr', 'Potri.011G045100' => 'ptr', 'Potri.013G144700' => 'ptr', 'Potri.019G104000' => 'ptr', 'Pp3c10_9510' => 'ppa', 'Pp3c1_21730' => 'ppa', 'Pp3c25_8700' => 'ppa', 'Pp3c2_16160' => 'ppa', 'Pp3c5_14240' => 'ppa', 'PRCOL_00004689' => 'pco', 'PRCOL_00006682' => 'pco', 'Prupe.3G233400' => 'ppe', 'Prupe.4G039500' => 'ppe', 'Prupe.5G024700' => 'ppe', 'Prupe.6G353700' => 'ppe', 'Psat0s4751g0040' => 'psa', 'Psat1g207560' => 'psa', 'Psat1g207600' => 'psa', 'Psat2g140520' => 'psa', 'Psat5g222840' => 'psa', 'Psat5g270320' => 'psa', 'Psat7g111240' => 'psa', 'Psat7g190080' => 'psa', 'PSO063G3742' => 'pso', 'PSO210G3391' => 'pso', 'PSO541G4855' => 'pso', 'PSO675G8695' => 'pso', 'PSO782G1124' => 'pso', 'PSO832G4019' => 'pso', 'QL05p038223' => 'qlo', 'QL05p038235' => 'qlo', 'QL08p037596' => 'qlo', 'QL12p000270' => 'qlo', 'RcHm_v2.0_Chr2g0095861' => 'rch', 'RcHm_v2.0_Chr2g0134221' => 'rch', 'RcHm_v2.0_Chr2g0162171' => 'rch', 'RcHm_v2.0_Chr4g0394081' => 'rch', 'RcHm_v2.0_Chr4g0408101' => 'rch', 'RcHm_v2.0_Chr4g0411841' => 'rch', 'RcHm_v2.0_Chr5g0006841' => 'rch', 'RcHm_v2.0_Chr5g0006891' => 'rch', 'RcHm_v2.0_Chr5g0007151' => 'rch', 'RcHm_v2.0_Chr5g0007161' => 'rch', 'RcHm_v2.0_Chr5g0007321' => 'rch', 'RcHm_v2.0_Chr5g0007411' => 'rch', 'RcHm_v2.0_Chr7g0212781' => 'rch', 'Rhsim02G0120700' => 'rsi', 'Rhsim04G0066100' => 'rsi', 'Rhsim06G0149500' => 'rsi', 'Rhsim13G0175200' => 'rsi', 'Sabra01G0103700' => 'sbr', 'Sabra03G0067400' => 'sbr', 'Sabra04G0022100' => 'sbr', 'Sabra11G0031400' => 'sbr', 'Sabra13G0116700' => 'sbr', 'Sabra19G0114700' => 'sbr', 'SalBow1G0555' => 'sbo', 'SalBow1G6681' => 'sbo', 'SalBow1G8160' => 'sbo', 'SalBow6G4773' => 'sbo', 'SalBow7G2253' => 'sbo', 'SalBow8G3649' => 'sbo', 'Sc05g0007970' => 'sci', 'Sc12g0002780' => 'sci', 'Sc21g0002400' => 'sci', 'Sc22g0001930' => 'sci', 'Sc24g0000950' => 'sci', 'Sed0004208' => 'sed', 'Sed0006850' => 'sed', 'Sed0011454' => 'sed', 'Sed0014078' => 'sed', 'Sed0014247' => 'sed', 'SEGI_02204' => 'sgi', 'SEGI_34535' => 'sgi', 'SGA_v2.0_scaffold109G31093' => 'sas', 'SGA_v2.0_scaffold144G35862' => 'sas', 'SGA_v2.0_scaffold159G37648' => 'sas', 'SGA_v2.0_scaffold22G09728' => 'sas', 'SGA_v2.0_scaffold49G18288' => 'sas', 'SGA_v2.0_scaffold89G27428' => 'sas', 'SMO117G0058' => 'smo', 'SMO361G0339' => 'smo', 'Solyc07g054490.3' => 'sly', 'Solyc08g076210.3' => 'sly', 'Solyc10g008550.3' => 'sly', 'Solyc10g009180.3' => 'sly', 'Solyc12g010750.2' => 'sly', 'Sopen02g023660' => 'spe', 'Sopen07g028430' => 'spe', 'Sopen08g024850' => 'spe', 'Sopen10g004360' => 'spe', 'Sopen10g004970' => 'spe', 'Sopen12g005250' => 'spe', 'Sp1g02480' => 'spa', 'Sp1g09850' => 'spa', 'Sp1g27710' => 'spa', 'Sp2g03230' => 'spa', 'Sp3g34090' => 'spa', 'Sp4g17780' => 'spa', 'TAR624G1444' => 'tar', 'TAR626G1479' => 'tar', 'TAR627G0914' => 'tar', 'TAR629G1429' => 'tar', 'TAR629G1823' => 'tar', 'THA.LOC104801186' => 'tha', 'THA.LOC104804068' => 'tha', 'THA.LOC104812729' => 'tha', 'THA.LOC104814408' => 'tha', 'THA.LOC104819079' => 'tha', 'THA.LOC104826025' => 'tha', 'Thecc.02G174100' => 'tca', 'Thecc.03G313700' => 'tca', 'Thecc.06G195500' => 'tca', 'Thecc.06G195600' => 'tca', 'Thecc.06G195700' => 'tca', 'Thhalv10002062m.g' => 'esa', 'Thhalv10008358m.g' => 'esa', 'Thhalv10008409m.g' => 'esa', 'Thhalv10008500m.g' => 'esa', 'Thhalv10017084m.g' => 'esa', 'Thhalv10023622m.g' => 'esa', 'TPR.G21651' => 'tpr', 'TPR.G21668' => 'tpr', 'TPR.G24218' => 'tpr', 'TPR.G32400' => 'tpr', 'TPR.G35553' => 'tpr', 'TPR.G36834' => 'tpr', 'TPR.G84' => 'tpr', 'TWI18G0636' => 'twi', 'TWI36G1444' => 'twi', 'TWI38G0352' => 'twi', 'TWI38G0754' => 'twi', 'TWI75G1363' => 'twi', 'TWI81G0129' => 'twi', 'unitig_0.g2837' => 'ugi', 'unitig_22.g6745' => 'ugi', 'unitig_26.g9941' => 'ugi', 'vmacro00237' => 'vma', 'vmacro09270' => 'vma', 'vmacro12268' => 'vma', 'vmacro15876' => 'vma', 'vmacro22272' => 'vma', 'VMungo0251G2887' => 'vmu', 'VMungo0540G2223' => 'vmu', 'VMungo1080G0759' => 'vmu', 'VMungo1127G2280' => 'vmu', 'VMungo1215G0887' => 'vmu', 'VMungo1215G3286' => 'vmu', 'Zm00001eb049120' => 'zma', 'Zm00001eb107010' => 'zma', 'Zm00001eb151480' => 'zma', 'Zm00001eb172190' => 'zma', 'Zm00001eb219590' => 'zma', 'Zm00001eb219610' => 'zma', 'Zm00001eb251510' => 'zma', 'Zm00001eb292060' => 'zma', 'Zm00001eb324430' => 'zma', 'Zm00001eb352800' => 'zma', 'Zm00001eb430100' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001041' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001041' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001041' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001041' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151